Result of FASTA (ccds) for
pFN21AE6220
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6220, 288 aa
1>>>pF1KE6220 288 - 288 aa - 288 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.9347+/-0.000846; mu= 7.3820+/- 0.052
mean_var=243.3794+/-49.017, 0's: 0 Z-trim(116.0): 98 B-trim: 138 in 1/54
Lambda= 0.082211
statistics sampled from 16523 (16627) to 16523 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.805), E-opt: 0.2 (0.511), width: 16
Scan time: 2.520
The best scores are: opt bits E(32554)
CCDS301.1 FCN3 gene_id:8547|Hs108|chr1 ( 288) 2086 259.3 2.3e-69
CCDS300.1 FCN3 gene_id:8547|Hs108|chr1 ( 299) 1622 204.3 8.6e-53
CCDS6983.1 FCN2 gene_id:2220|Hs108|chr9 ( 313) 956 125.4 5.4e-29
CCDS6985.1 FCN1 gene_id:2219|Hs108|chr9 ( 326) 925 121.7 7e-28
CCDS1318.1 TNR gene_id:7143|Hs108|chr1 (1358) 708 96.7 1e-19
CCDS6868.1 ANGPTL2 gene_id:23452|Hs108|chr9 ( 493) 677 92.5 6.6e-19
CCDS11208.1 MFAP4 gene_id:4239|Hs108|chr17 ( 255) 671 91.5 7e-19
CCDS56023.1 MFAP4 gene_id:4239|Hs108|chr17 ( 279) 671 91.5 7.4e-19
CCDS12224.1 ANGPTL6 gene_id:83854|Hs108|chr19 ( 470) 668 91.4 1.3e-18
CCDS6937.1 FIBCD1 gene_id:84929|Hs108|chr9 ( 461) 639 88.0 1.4e-17
CCDS1327.1 ANGPTL1 gene_id:9068|Hs108|chr1 ( 491) 637 87.8 1.8e-17
CCDS6811.1 TNC gene_id:3371|Hs108|chr9 (2201) 638 88.6 4.3e-17
CCDS4736.1 TNXB gene_id:7148|Hs108|chr6 ( 673) 603 83.9 3.5e-16
CCDS30943.1 TNN gene_id:63923|Hs108|chr1 (1299) 602 84.1 5.9e-16
CCDS83313.1 ANGPT1 gene_id:284|Hs108|chr8 ( 298) 582 81.0 1.2e-15
CCDS56551.1 ANGPT1 gene_id:284|Hs108|chr8 ( 497) 582 81.2 1.6e-15
CCDS6306.1 ANGPT1 gene_id:284|Hs108|chr8 ( 498) 582 81.2 1.6e-15
CCDS128.1 ANGPTL7 gene_id:10218|Hs108|chr1 ( 346) 574 80.1 2.5e-15
CCDS47761.1 ANGPT2 gene_id:285|Hs108|chr8 ( 444) 575 80.4 2.7e-15
CCDS47762.1 ANGPT2 gene_id:285|Hs108|chr8 ( 495) 575 80.4 2.9e-15
CCDS5958.1 ANGPT2 gene_id:285|Hs108|chr8 ( 496) 575 80.4 2.9e-15
CCDS13009.1 ANGPT4 gene_id:51378|Hs108|chr20 ( 503) 548 77.2 2.7e-14
CCDS5591.1 FGL2 gene_id:10875|Hs108|chr7 ( 439) 541 76.3 4.4e-14
CCDS12200.1 ANGPTL4 gene_id:51129|Hs108|chr19 ( 406) 522 74.0 2e-13
CCDS42493.1 ANGPTL4 gene_id:51129|Hs108|chr19 ( 368) 458 66.4 3.6e-11
>>CCDS301.1 FCN3 gene_id:8547|Hs108|chr1 (288 aa)
initn: 2086 init1: 2086 opt: 2086 Z-score: 1358.8 bits: 259.3 E(32554): 2.3e-69
Smith-Waterman score: 2086; 100.0% identity (100.0% similar) in 288 aa overlap (1-288:1-288)
10 20 30 40 50 60
pF1KE6 MDLLWILPSLWLLLLGGPACLKTQEHPSCPGPRELEASKVVLLPSCPGAPGSPGEKGAPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MDLLWILPSLWLLLLGGPACLKTQEHPSCPGPRELEASKVVLLPSCPGAPGSPGEKGAPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 PQGPPGPPGKMGPKGEPGPRNCRELLSQGATLSGWYHLCLPEGRALPVFCDMDTEGGGWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 PQGPPGPPGKMGPKGEPGPRNCRELLSQGATLSGWYHLCLPEGRALPVFCDMDTEGGGWL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 VFQRRQDGSVDFFRSWSSYRAGFGNQESEFWLGNENLHQLTLQGNWELRVELEDFNGNRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 VFQRRQDGSVDFFRSWSSYRAGFGNQESEFWLGNENLHQLTLQGNWELRVELEDFNGNRT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 FAHYATFRLLGEVDHYQLALGKFSEGTAGDSLSLHSGRPFTTYDADHDSSNSNCAVIVHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FAHYATFRLLGEVDHYQLALGKFSEGTAGDSLSLHSGRPFTTYDADHDSSNSNCAVIVHG
190 200 210 220 230 240
250 260 270 280
pF1KE6 AWWYASCYRSNLNGRYAVSEAAAHKYGIDWASGRGVGHPYRRVRMMLR
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 AWWYASCYRSNLNGRYAVSEAAAHKYGIDWASGRGVGHPYRRVRMMLR
250 260 270 280
>>CCDS300.1 FCN3 gene_id:8547|Hs108|chr1 (299 aa)
initn: 1506 init1: 1506 opt: 1622 Z-score: 1061.2 bits: 204.3 E(32554): 8.6e-53
Smith-Waterman score: 2054; 96.3% identity (96.3% similar) in 299 aa overlap (1-288:1-299)
10 20 30 40 50 60
pF1KE6 MDLLWILPSLWLLLLGGPACLKTQEHPSCPGPRELEASKVVLLPSCPGAPGSPGEKGAPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MDLLWILPSLWLLLLGGPACLKTQEHPSCPGPRELEASKVVLLPSCPGAPGSPGEKGAPG
10 20 30 40 50 60
70 80 90 100
pF1KE6 PQGPPGPPGKMGPKGEPG-----------PRNCRELLSQGATLSGWYHLCLPEGRALPVF
:::::::::::::::::: :::::::::::::::::::::::::::::::
CCDS30 PQGPPGPPGKMGPKGEPGDPVNLLRCQEGPRNCRELLSQGATLSGWYHLCLPEGRALPVF
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE6 CDMDTEGGGWLVFQRRQDGSVDFFRSWSSYRAGFGNQESEFWLGNENLHQLTLQGNWELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 CDMDTEGGGWLVFQRRQDGSVDFFRSWSSYRAGFGNQESEFWLGNENLHQLTLQGNWELR
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE6 VELEDFNGNRTFAHYATFRLLGEVDHYQLALGKFSEGTAGDSLSLHSGRPFTTYDADHDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 VELEDFNGNRTFAHYATFRLLGEVDHYQLALGKFSEGTAGDSLSLHSGRPFTTYDADHDS
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE6 SNSNCAVIVHGAWWYASCYRSNLNGRYAVSEAAAHKYGIDWASGRGVGHPYRRVRMMLR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SNSNCAVIVHGAWWYASCYRSNLNGRYAVSEAAAHKYGIDWASGRGVGHPYRRVRMMLR
250 260 270 280 290
>>CCDS6983.1 FCN2 gene_id:2220|Hs108|chr9 (313 aa)
initn: 971 init1: 831 opt: 956 Z-score: 634.1 bits: 125.4 E(32554): 5.4e-29
Smith-Waterman score: 998; 48.7% identity (72.3% similar) in 300 aa overlap (9-288:14-311)
10 20 30 40 50
pF1KE6 MDLLWILPSLWLLLLGGPACLKTQEHPSCPGPRE--LEAS-KVVLLPSCPGAPGS
.: : .:: :.. . .:: . ::.: :...: .::: ::.
CCDS69 MELDRAVGVLGAATLLLSFLGMAWALQAAD--TCPEVKMVGLEGSDKLTILRGCPGLPGA
10 20 30 40 50
60 70 80 90
pF1KE6 PGEKGAPGP------QGPPGPPGKMGPKG------EP-----GPRNCRELLSQGATLSGW
:: :: : .:::::::: :: : :: :::.:..::..: ::::
CCDS69 PGPKGEAGTNGKRGERGPPGPPGKAGPPGPNGAPGEPQPCLTGPRTCKDLLDRGHFLSGW
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE6 YHLCLPEGRALPVFCDMDTEGGGWLVFQRRQDGSVDFFRSWSSYRAGFGNQESEFWLGNE
. . ::. : : :.:::::.:::: ::::: ::::::.:.:..:. :::.. .::::::.
CCDS69 HTIYLPDCRPLTVLCDMDTDGGGWTVFQRRVDGSVDFYRDWATYKQGFGSRLGEFWLGND
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE6 NLHQLTLQGNWELRVELEDFNGNRTFAHYATFRLLGEVDHYQLALGKFSEGTAGDSLSLH
:.: :: ::. ::::.: ::. : ::.: .:.. :...:.:.:: : ::.:::::..:
CCDS69 NIHALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADEAEKYNLVLGAFVEGSAGDSLTFH
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE6 SGRPFTTYDADHDSSNSNCAVIVHGAWWYASCYRSNLNGRYAVSEAAAHKYGIDWASGRG
... :.: : :.: ...::::. .::::: .:. ::::::: . .. ::.: ::.:
CCDS69 NNQSFSTKDQDNDLNTGNCAVMFQGAWWYKNCHVSNLNGRYLRGTHGSFANGINWKSGKG
240 250 260 270 280 290
280
pF1KE6 VGHPYRRVRMMLR
.. :. .: .:
CCDS69 YNYSYKVSEMKVRPA
300 310
>>CCDS6985.1 FCN1 gene_id:2219|Hs108|chr9 (326 aa)
initn: 1422 init1: 823 opt: 925 Z-score: 614.0 bits: 121.7 E(32554): 7e-28
Smith-Waterman score: 937; 45.7% identity (67.2% similar) in 317 aa overlap (4-288:12-324)
10 20 30 40
pF1KE6 MDLLWILPSLWLLLLGGPACLKTQEHPSCPGPRE--LEAS-KVVLLPSCPGA
: .: :.: . . :: : .:: . ::.: :...: .:::
CCDS69 MELSGATMARGLAVLLVLFLHIKNLPA----QAADTCPEVKVVGLEGSDKLTILRGCPGL
10 20 30 40 50
50 60 70 80
pF1KE6 PGSPGEKG---------------APGPQGPPGPPGKMGPKG--------------EPGPR
::.:: :: ::: :: :: : : :: :::
CCDS69 PGAPGPKGEAGVIGERGERGLPGAPGKAGPVGPKGDRGEKGMRGEKGDAGQSQSCATGPR
60 70 80 90 100 110
90 100 110 120 130 140
pF1KE6 NCRELLSQGATLSGWYHLCLPEGRALPVFCDMDTEGGGWLVFQRRQDGSVDFFRSWSSYR
::..::..: ::::. . ::. : : :.:::::.:::: :::::.::::::.:.:..:.
CCDS69 NCKDLLDRGYFLSGWHTIYLPDCRPLTVLCDMDTDGGGWTVFQRRMDGSVDFYRDWAAYK
120 130 140 150 160 170
150 160 170 180 190 200
pF1KE6 AGFGNQESEFWLGNENLHQLTLQGNWELRVELEDFNGNRTFAHYATFRLLGEVDHYQLAL
:::.: .::::::.:.: :: ::. ::::.: ::.::. ::.: .:.. :...:.:.:
CCDS69 QGFGSQLGEFWLGNDNIHALTAQGSSELRVDLVDFEGNHQFAKYKSFKVADEAEKYKLVL
180 190 200 210 220 230
210 220 230 240 250 260
pF1KE6 GKFSEGTAGDSLSLHSGRPFTTYDADHDSSNSNCAVIVHGAWWYASCYRSNLNGRYAVSE
: : :.::.::. :.. :.: : :.: :.:::: .::::::.:. ::::: : ..
CCDS69 GAFVGGSAGNSLTGHNNNFFSTKDQDNDVSSSNCAEKFQGAWWYADCHASNLNGLYLMGP
240 250 260 270 280 290
270 280
pF1KE6 AAAHKYGIDWASGRGVGHPYRRVRMMLR
.. ::.:....: . :. .: .:
CCDS69 HESYANGINWSAAKGYKYSYKVSEMKVRPA
300 310 320
>>CCDS1318.1 TNR gene_id:7143|Hs108|chr1 (1358 aa)
initn: 578 init1: 338 opt: 708 Z-score: 467.6 bits: 96.7 E(32554): 1e-19
Smith-Waterman score: 708; 47.5% identity (72.6% similar) in 219 aa overlap (72-288:1128-1341)
50 60 70 80 90 100
pF1KE6 LLPSCPGAPGSPGEKGAPGPQGPPGPPGKMGPKGEPGPRNCRELLSQGATLSGWYHLCL-
: . : :..: . : .: :::: : . :
CCDS13 GLLENTDYTVLLQAAQDTTWSSITSTAFTTGGRVFPHPQDCAQHLMNGDTLSGVYPIFLN
1100 1110 1120 1130 1140 1150
110 120 130 140 150
pF1KE6 -PEGRALPVFCDMDTEGGGWLVFQRRQDGSVDFFRSWSSYRAGFGNQESEFWLGNENLHQ
.. : :.::: :.::::.::::::.:..::::.:..::.:::: :.::::: .:.:.
CCDS13 GELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVGFGNVEDEFWLGLDNIHR
1160 1170 1180 1190 1200 1210
160 170 180 190 200 210
pF1KE6 LTLQGNWELRVELEDFNGNRTFAHYATFRLLGEVDHYQLALGKFSEGTAGDSLSLHSGRP
.: :: .::::...: . . .:: : : . . :.: .:... :::::::: :.:::
CCDS13 ITSQGRYELRVDMRD-GQEAAFASYDRFSVEDSRNLYKLRIGSYN-GTAGDSLSYHQGRP
1220 1230 1240 1250 1260 1270
220 230 240 250 260 270
pF1KE6 FTTYDADHDSSNSNCAVIVHGAWWYASCYRSNLNGRYAVSEAAAHKYGIDWASGRGVGHP
:.: : :.: . .:::. .::::: .:.:.::::.:. :. :. ::.: .:
CCDS13 FSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESR---HSQGINWYHWKGHEFS
1280 1290 1300 1310 1320 1330
280
pF1KE6 YRRVRMMLR
:.: .:
CCDS13 IPFVEMKMRPYNHRLMAGRKRQSLQF
1340 1350
>>CCDS6868.1 ANGPTL2 gene_id:23452|Hs108|chr9 (493 aa)
initn: 647 init1: 379 opt: 677 Z-score: 452.9 bits: 92.5 E(32554): 6.6e-19
Smith-Waterman score: 677; 40.9% identity (64.9% similar) in 276 aa overlap (24-288:215-486)
10 20 30 40 50
pF1KE6 MDLLWILPSLWLLLLGGPACLKTQEHPSCPGPRELEA---SKVVLLPSCPGAP
: :. : :: . .... :
CCDS68 HLATLAHNQSEIIAQLEEHCQRVPSARPVPQPPPAAP-PRVYQPPTYNRIINQISTNEIQ
190 200 210 220 230 240
60 70 80 90 100
pF1KE6 GSPGEKGAPGPQGPPGPPGKMGPKG--EP-GP-RNCRELLSQGATLSGWYHLCLPEG--R
.. . : : : : : :.. .: :: :.: . : .: :. : : ::. :
CCDS68 SDQNLKVLPPPL-PTMPTLTSLPSSTDKPSGPWRDCLQALEDGHDTSSIY-LVKPENTNR
250 260 270 280 290 300
110 120 130 140 150 160
pF1KE6 ALPVFCDMDTEGGGWLVFQRRQDGSVDFFRSWSSYRAGFGNQESEFWLGNENLHQLTLQG
. :.::. . ::: :.::: ::::.:::.: .:. :::: ..:.::: ::.. :: ::
CCDS68 LMQVWCDQRHDPGGWTVIQRRLDGSVNFFRNWETYKQGFGNIDGEYWLGLENIYWLTNQG
310 320 330 340 350 360
170 180 190 200 210 220
pF1KE6 NWELRVELEDFNGNRTFAHYATFRLLGEVDHYQLALGKFSEGTAGDSLSLHSGRPFTTYD
:..: : .::..: ..::.::.::: : ..:.: ::.. .:.::::.. :.:. ::: :
CCDS68 NYKLLVTMEDWSGRKVFAEYASFRLEPESEYYKLRLGRY-HGNAGDSFTWHNGKQFTTLD
370 380 390 400 410 420
230 240 250 260 270 280
pF1KE6 ADHDSSNSNCAVIVHGAWWYASCYRSNLNGRYAVSEAAAHKY--GIDWASGRGVGHPYRR
::: ..::: .:.::: .: .::::: . . .: :. :: :: .. ..
CCDS68 RDHDVYTGNCAHYQKGGWWYNACAHSNLNGVWYRGGHYRSRYQDGVYWAEFRGGSYSLKK
430 440 450 460 470 480
pF1KE6 VRMMLR
: ::.:
CCDS68 VVMMIRPNPNTFH
490
>>CCDS11208.1 MFAP4 gene_id:4239|Hs108|chr17 (255 aa)
initn: 622 init1: 366 opt: 671 Z-score: 452.4 bits: 91.5 E(32554): 7e-19
Smith-Waterman score: 671; 43.1% identity (66.9% similar) in 239 aa overlap (64-288:16-253)
40 50 60 70 80
pF1KE6 ELEASKVVLLPSCPGAPGSPGEKGAPGPQGPPGPPGKMGPKGEP-------GPRNCRELL
:: : : .:. : .: ..
CCDS11 MKALLALPLLLLLSTPPCAPQVSGIRGDALERFCLQQPLDCDDIY
10 20 30 40
90 100 110 120 130 140
pF1KE6 SQGATLSGWYHLCLPEGRALPV--FCDMDTEGGGWLVFQRRQDGSVDFFRSWSSYRAGFG
.:: .: : : : : ..:: :::: :::: : :::.: .:::.:::.:..:. :::
CCDS11 AQGYQSDGVY-LIYPSGPSVPVPVFCDMTTEGGKWTVFQKRFNGSVSFFRGWNDYKLGFG
50 60 70 80 90 100
150 160 170 180 190
pF1KE6 NQESEFWLGNENLHQLTLQGNWELRVELEDFNGNRTFAHYATFRLL-----GEVDHYQLA
..:.::: .:.: :::. ..::::.::::..: ..:.:: : . .: : : :
CCDS11 RADGEYWLGLQNMHLLTLKQKYELRVDLEDFENNTAYAKYADFSISPNAVSAEEDGYTLF
110 120 130 140 150 160
200 210 220 230 240 250
pF1KE6 LGKFSEGTAGDSLSLHSGRPFTTYDADHDSSNSNCAVIVHGAWWYASCYRSNLNGRYAVS
.. : .: :::::: :::. :.:.: :.: .:::.. ::.:. ::. .:::: : .
CCDS11 VAGFEDGGAGDSLSYHSGQKFSTFDRDQDLFVQNCAALSSGAFWFRSCHFANLNGFYLGG
170 180 190 200 210 220
260 270 280
pF1KE6 EAAAHKYGIDWASGRGVGHPYRRVRMMLR
.. ::.::. .: . .:..: .:
CCDS11 SHLSYANGINWAQWKGFYYSLKRTEMKIRRA
230 240 250
>>CCDS56023.1 MFAP4 gene_id:4239|Hs108|chr17 (279 aa)
initn: 622 init1: 366 opt: 671 Z-score: 452.0 bits: 91.5 E(32554): 7.4e-19
Smith-Waterman score: 671; 43.1% identity (66.9% similar) in 239 aa overlap (64-288:40-277)
40 50 60 70 80
pF1KE6 ELEASKVVLLPSCPGAPGSPGEKGAPGPQGPPGPPGKMGPKGEP-------GPRNCRELL
:: : : .:. : .: ..
CCDS56 PLATEGTMKAQGVLLKLALLALPLLLLLSTPPCAPQVSGIRGDALERFCLQQPLDCDDIY
10 20 30 40 50 60
90 100 110 120 130 140
pF1KE6 SQGATLSGWYHLCLPEGRALPV--FCDMDTEGGGWLVFQRRQDGSVDFFRSWSSYRAGFG
.:: .: : : : : ..:: :::: :::: : :::.: .:::.:::.:..:. :::
CCDS56 AQGYQSDGVY-LIYPSGPSVPVPVFCDMTTEGGKWTVFQKRFNGSVSFFRGWNDYKLGFG
70 80 90 100 110 120
150 160 170 180 190
pF1KE6 NQESEFWLGNENLHQLTLQGNWELRVELEDFNGNRTFAHYATFRLL-----GEVDHYQLA
..:.::: .:.: :::. ..::::.::::..: ..:.:: : . .: : : :
CCDS56 RADGEYWLGLQNMHLLTLKQKYELRVDLEDFENNTAYAKYADFSISPNAVSAEEDGYTLF
130 140 150 160 170 180
200 210 220 230 240 250
pF1KE6 LGKFSEGTAGDSLSLHSGRPFTTYDADHDSSNSNCAVIVHGAWWYASCYRSNLNGRYAVS
.. : .: :::::: :::. :.:.: :.: .:::.. ::.:. ::. .:::: : .
CCDS56 VAGFEDGGAGDSLSYHSGQKFSTFDRDQDLFVQNCAALSSGAFWFRSCHFANLNGFYLGG
190 200 210 220 230 240
260 270 280
pF1KE6 EAAAHKYGIDWASGRGVGHPYRRVRMMLR
.. ::.::. .: . .:..: .:
CCDS56 SHLSYANGINWAQWKGFYYSLKRTEMKIRRA
250 260 270
>>CCDS12224.1 ANGPTL6 gene_id:83854|Hs108|chr19 (470 aa)
initn: 633 init1: 369 opt: 668 Z-score: 447.4 bits: 91.4 E(32554): 1.3e-18
Smith-Waterman score: 668; 45.1% identity (69.1% similar) in 233 aa overlap (61-288:237-466)
40 50 60 70 80
pF1KE6 GPRELEASKVVLLPSCPGAPGSPGEKGAPGPQGPPGPPGKMGPKGEP-GP-RNCRELLSQ
:.. : : :. . .: :: ..: : .
CCDS12 VRLVGSTSDTSRMLDPAPEPQRDQTQRQQEPMASPMPAGHPAVPTKPVGPWQDCAEARQA
210 220 230 240 250 260
90 100 110 120 130 140
pF1KE6 GATLSGWYHLCLPEGR-ALPVFCDMDTEGGGWLVFQRRQDGSVDFFRSWSSYRAGFGNQE
: :: :.: . :: .. :.:... ::::: :.::::::::.:: .:. :.:::: .
CCDS12 GHEQSGVYELRV--GRHVVSVWCEQQLEGGGWTVIQRRQDGSVNFFTTWQHYKAGFGRPD
270 280 290 300 310 320
150 160 170 180 190 200
pF1KE6 SEFWLGNENLHQLTLQGNWELRVELEDFNGNRTFAHYATFRLLGEVDHYQLALGKFSEGT
.:.::: : ..::: .:. :: : :::..: . ::: : : : :::.: ::.. .:
CCDS12 GEYWLGLEPVYQLTSRGDHELLVLLEDWGGRGARAHYDGFSLEPESDHYRLRLGQY-HGD
330 340 350 360 370 380
210 220 230 240 250 260
pF1KE6 AGDSLSLHSGRPFTTYDADHDSSNSNCAVIVHGAWWYASCYRSNLNGRYAVSEAAAHKY-
:::::: :. .::.: : :.:: ..:::. .:.::: .: .::::: . . .:
CCDS12 AGDSLSWHNDKPFSTVDRDRDSYSGNCALYQRGGWWYHACAHSNLNGVWHHGGHYRSRYQ
390 400 410 420 430 440
270 280
pF1KE6 -GIDWASGRGVGHPYRRVRMMLR
:. :: :: .. :.. :..:
CCDS12 DGVYWAEFRGGAYSLRKAAMLIRPLKL
450 460 470
>>CCDS6937.1 FIBCD1 gene_id:84929|Hs108|chr9 (461 aa)
initn: 582 init1: 344 opt: 639 Z-score: 428.9 bits: 88.0 E(32554): 1.4e-17
Smith-Waterman score: 639; 44.5% identity (67.8% similar) in 227 aa overlap (73-288:232-455)
50 60 70 80 90
pF1KE6 LPSCPGAPGSPGEKGAPGPQGPPGPPGKMGPKG-EPG--PRNCRELLSQGATLSGWYHLC
:.: : ::.: ..: .: .: : .
CCDS69 DILDALQRDRGLGRPRNKADLQRAPARGTRPRGCATGSRPRDCLDVLLSGQQDDGVYSVF
210 220 230 240 250 260
100 110 120 130 140 150
pF1KE6 ---LPEGRALPVFCDMDTEGGGWLVFQRRQDGSVDFFRSWSSYRAGFGNQESEFWLGNEN
: : . :.::: :.:::: :::::.::::.:::.:..:: ::: .: ::: .
CCDS69 PTHYPAG--FQVYCDMRTDGGGWTVFQRREDGSVNFFRGWDAYRDGFGRLTGEHWLGLKR
270 280 290 300 310
160 170 180 190 200 210
pF1KE6 LHQLTLQGNWELRVELEDFNGNRTFAHYATF-----RLLGEVDHYQLALGKFSEGTAGDS
.: :: :. .::.:.::::... ..:.:..: . : : : :... .: ::::::
CCDS69 IHALTTQAAYELHVDLEDFENGTAYARYGSFGVGLFSVDPEEDGYPLTVADYS-GTAGDS
320 330 340 350 360 370
220 230 240 250 260 270
pF1KE6 LSLHSGRPFTTYDADHDSSNSNCAVIVHGAWWYASCYRSNLNGRYAVSEAAAHKYGIDWA
: ::: ::: : : : :..:::.. .::::: .:. :::::.: . :.. :..:.
CCDS69 LLKHSGMRFTTKDRDSDHSENNCAAFYRGAWWYRNCHTSNLNGQYLRGAHASYADGVEWS
380 390 400 410 420 430
280
pF1KE6 SGRGVGHPYRRVRMMLR
: : . . .: .:
CCDS69 SWTGWQYSLKFSEMKIRPVREDR
440 450 460
288 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 11:12:12 2016 done: Tue Nov 8 11:12:13 2016
Total Scan time: 2.520 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]