Result of FASTA (ccds) for
pFN21AE6185
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6185, 164 aa
1>>>pF1KE6185 164 - 164 aa - 164 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1588+/-0.000738; mu= 12.4820+/- 0.044
mean_var=53.0736+/-10.268, 0's: 0 Z-trim(106.9): 38 B-trim: 0 in 0/50
Lambda= 0.176050
statistics sampled from 9204 (9238) to 9204 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.681), E-opt: 0.2 (0.284), width: 16
Scan time: 1.450
The best scores are: opt bits E(32554)
CCDS42827.1 AP1S3 gene_id:130340|Hs108|chr2 ( 154) 933 244.5 2.1e-65
CCDS14173.1 AP1S2 gene_id:8905|Hs108|chrX ( 157) 776 204.6 2.2e-53
CCDS75958.1 AP1S2 gene_id:8905|Hs108|chrX ( 160) 768 202.6 8.9e-53
CCDS47669.1 AP1S1 gene_id:1174|Hs108|chr7 ( 158) 761 200.8 3e-52
CCDS33062.1 AP2S1 gene_id:1175|Hs108|chr19 ( 142) 453 122.5 9.7e-29
CCDS77322.1 AP2S1 gene_id:1175|Hs108|chr19 ( 144) 446 120.8 3.4e-28
CCDS77321.1 AP2S1 gene_id:1175|Hs108|chr19 ( 158) 446 120.8 3.7e-28
CCDS45093.1 AP4S1 gene_id:11154|Hs108|chr14 ( 144) 366 100.5 4.4e-22
CCDS10357.1 AP3S2 gene_id:10239|Hs108|chr15 ( 193) 348 95.9 1.4e-20
CCDS83021.1 AP3S1 gene_id:1176|Hs108|chr5 ( 162) 322 89.3 1.1e-18
CCDS4123.1 AP3S1 gene_id:1176|Hs108|chr5 ( 193) 319 88.6 2.3e-18
CCDS77323.1 AP2S1 gene_id:1175|Hs108|chr19 ( 156) 311 86.5 7.6e-18
CCDS58309.1 AP4S1 gene_id:11154|Hs108|chr14 ( 149) 291 81.4 2.5e-16
CCDS9642.1 AP4S1 gene_id:11154|Hs108|chr14 ( 159) 289 80.9 3.7e-16
CCDS55977.1 AP3S2 gene_id:100526783|Hs108|chr15 ( 394) 290 81.3 7.1e-16
CCDS58310.1 AP4S1 gene_id:11154|Hs108|chr14 ( 135) 268 75.6 1.3e-14
>>CCDS42827.1 AP1S3 gene_id:130340|Hs108|chr2 (154 aa)
initn: 933 init1: 933 opt: 933 Z-score: 1287.7 bits: 244.5 E(32554): 2.1e-65
Smith-Waterman score: 933; 100.0% identity (100.0% similar) in 143 aa overlap (1-143:1-143)
10 20 30 40 50 60
pF1KE6 MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG
70 80 90 100 110 120
130 140 150 160
pF1KE6 GEIQETSKKIAVKAIEDSDMLQENRLSPRGRDCSEPRSCHCTLA
:::::::::::::::::::::::
CCDS42 GEIQETSKKIAVKAIEDSDMLQETMEEYMNKPTF
130 140 150
>>CCDS14173.1 AP1S2 gene_id:8905|Hs108|chrX (157 aa)
initn: 776 init1: 776 opt: 776 Z-score: 1072.1 bits: 204.6 E(32554): 2.2e-53
Smith-Waterman score: 776; 74.3% identity (93.2% similar) in 148 aa overlap (2-149:1-148)
10 20 30 40 50 60
pF1KE6 MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK
..:.:::::::::::::::. : :::.::::::.:: .:.: . ::..:..::.:::
CCDS14 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYK
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG
::::::::::::.:::::.::::.::::::::::::.::::::::::::::::::::..:
CCDS14 RYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLG
60 70 80 90 100 110
130 140 150 160
pF1KE6 GEIQETSKKIAVKAIEDSDMLQENRLSPRGRDCSEPRSCHCTLA
::.:::::: ..::::..:.:::. .::
CCDS14 GEVQETSKKNVLKAIEQADLLQEEAETPRSVLEEIGLT
120 130 140 150
>>CCDS75958.1 AP1S2 gene_id:8905|Hs108|chrX (160 aa)
initn: 783 init1: 751 opt: 768 Z-score: 1060.9 bits: 202.6 E(32554): 8.9e-53
Smith-Waterman score: 768; 70.7% identity (89.8% similar) in 157 aa overlap (2-158:1-152)
10 20 30 40 50 60
pF1KE6 MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK
..:.:::::::::::::::. : :::.::::::.:: .:.: . ::..:..::.:::
CCDS75 MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYK
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG
::::::::::::.:::::.::::.::::::::::::.::::::::::::::::::::..:
CCDS75 RYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLG
60 70 80 90 100 110
130 140 150 160
pF1KE6 GEIQETSKKIAVKAIEDSDMLQENRLSPRGRDCSEPRSCHCTLA
::.:::::: ..::::..:.:::. ... :::
CCDS75 GEVQETSKKNVLKAIEQADLLQED-----AKEAETPRSVLEEIGLT
120 130 140 150 160
>>CCDS47669.1 AP1S1 gene_id:1174|Hs108|chr7 (158 aa)
initn: 761 init1: 761 opt: 761 Z-score: 1051.4 bits: 200.8 E(32554): 3e-52
Smith-Waterman score: 761; 71.1% identity (94.0% similar) in 149 aa overlap (1-149:1-149)
10 20 30 40 50 60
pF1KE6 MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK
:..:.:::::::::::::::.. ::::::..::..:..:.: . ::..:..::.:::
CCDS47 MMRFMLLFSRQGKLRLQKWYLATSDKERKKMVRELMQVVLARKPKMCSFLEWRDLKVVYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG
::::::::::::.:::::.:::..::::::::::::.::::::::::::::::::::..:
CCDS47 RYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMG
70 80 90 100 110 120
130 140 150 160
pF1KE6 GEIQETSKKIAVKAIEDSDMLQENRLSPRGRDCSEPRSCHCTLA
:..:.:::: ..::::..:.:::. :::
CCDS47 GDVQDTSKKSVLKAIEQADLLQEEDESPRSVLEEMGLA
130 140 150
>>CCDS33062.1 AP2S1 gene_id:1175|Hs108|chr19 (142 aa)
initn: 467 init1: 452 opt: 453 Z-score: 629.4 bits: 122.5 E(32554): 9.7e-29
Smith-Waterman score: 453; 44.4% identity (78.9% similar) in 142 aa overlap (1-142:1-139)
10 20 30 40 50 60
pF1KE6 MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK
::.:::. .: :: :: :::. . : :..:. .:. .. : . ..::.....:..:.
CCDS33 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG
:::.:::: .. .::.: :: .: .::.:..:: ::::::..::: :.: ..::....
CCDS33 RYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA
70 80 90 100 110 120
130 140 150 160
pF1KE6 GEIQETSKKIAVKAIEDSDMLQENRLSPRGRDCSEPRSCHCTLA
:::.:::. .:.... :::
CCDS33 GEIRETSQ---TKVLKQLLMLQSLE
130 140
>>CCDS77322.1 AP2S1 gene_id:1175|Hs108|chr19 (144 aa)
initn: 455 init1: 440 opt: 446 Z-score: 619.7 bits: 120.8 E(32554): 3.4e-28
Smith-Waterman score: 446; 44.0% identity (78.7% similar) in 141 aa overlap (2-142:4-141)
10 20 30 40 50
pF1KE6 MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLV
:.:::. .: :: :: :::. . : :..:. .:. .. : . ..::.....:..
CCDS77 MVWIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKII
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 YKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFI
:.:::.:::: .. .::.: :: .: .::.:..:: ::::::..::: :.: ..::..
CCDS77 YRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMF
70 80 90 100 110 120
120 130 140 150 160
pF1KE6 IGGEIQETSKKIAVKAIEDSDMLQENRLSPRGRDCSEPRSCHCTLA
..:::.:::. .:.... :::
CCDS77 LAGEIRETSQ---TKVLKQLLMLQSLE
130 140
>>CCDS77321.1 AP2S1 gene_id:1175|Hs108|chr19 (158 aa)
initn: 455 init1: 440 opt: 446 Z-score: 619.0 bits: 120.8 E(32554): 3.7e-28
Smith-Waterman score: 446; 44.0% identity (78.7% similar) in 141 aa overlap (2-142:18-155)
10 20 30 40
pF1KE6 MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGH
:.:::. .: :: :: :::. . : :..:. .:. .. :
CCDS77 MKLKGLGKRCKRREDLEIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDA
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE6 RTSSFVDWKELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDII
. ..::.....:..:.:::.:::: .. .::.: :: .: .::.:..:: ::::::..
CCDS77 KHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLV
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE6 FNFEKAYFILDEFIIGGEIQETSKKIAVKAIEDSDMLQENRLSPRGRDCSEPRSCHCTLA
::: :.: ..::....:::.:::. .:.... :::
CCDS77 FNFYKVYTVVDEMFLAGEIRETSQ---TKVLKQLLMLQSLE
130 140 150
>>CCDS45093.1 AP4S1 gene_id:11154|Hs108|chr14 (144 aa)
initn: 365 init1: 365 opt: 366 Z-score: 509.9 bits: 100.5 E(32554): 4.4e-22
Smith-Waterman score: 366; 36.1% identity (76.4% similar) in 144 aa overlap (1-144:1-144)
10 20 30 40 50 60
pF1KE6 MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKELKLVYK
::.:.:. ..::. ::.:.: . ..: . :... :::... ::...:..::.:.
CCDS45 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNEQCSFIEYKDFKLIYR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 RYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFIIG
.::.:.. .... .::. :..: .::.::.::. : ::::.::..:...::::....
CCDS45 QYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMFNLDKVHIILDEMVLN
70 80 90 100 110 120
130 140 150 160
pF1KE6 GEIQETSKKIAVKAIEDSDMLQENRLSPRGRDCSEPRSCHCTLA
: : ::.. . . : ..:.
CCDS45 GCIVETNRARILAPLLILDKMSES
130 140
>>CCDS10357.1 AP3S2 gene_id:10239|Hs108|chr15 (193 aa)
initn: 350 init1: 257 opt: 348 Z-score: 483.1 bits: 95.9 E(32554): 1.4e-20
Smith-Waterman score: 348; 36.7% identity (72.0% similar) in 150 aa overlap (1-144:1-150)
10 20 30 40 50
pF1KE6 MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKEL-----
::. ::.:. .:: :: ..: .:.. ...:.:: ...:.: .:.. :
CCDS10 MIQAILVFNNHGKPRLVRFYQRFPEEIQQQIVRETFHLVLKRDDNICNFLEGGSLIGGSD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 -KLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFIL
::.:..::.::: ......:: :.... .:: ::: : ::::::.::...:...::
CCDS10 YKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHMDKVHYIL
70 80 90 100 110 120
120 130 140 150 160
pF1KE6 DEFIIGGEIQETSKKIAVKAIEDSDMLQENRLSPRGRDCSEPRSCHCTLA
.: ..:: . ::. . : :: .. :...
CCDS10 QEVVMGGMVLETNMNEIVAQIEAQNRLEKSEGGLSAAPARAVSAVKNINLPEIPRNINIG
130 140 150 160 170 180
>>CCDS83021.1 AP3S1 gene_id:1176|Hs108|chr5 (162 aa)
initn: 320 init1: 233 opt: 322 Z-score: 448.7 bits: 89.3 E(32554): 1.1e-18
Smith-Waterman score: 322; 35.2% identity (67.9% similar) in 159 aa overlap (1-149:1-159)
10 20 30 40 50
pF1KE6 MIHFILLFSRQGKLRLQKWYITLPDKERKKITREIVQIILSRGHRTSSFVDWKEL-----
::. ::.:. .:: ::.:.: . ...: :: ... .: . . .:.. :
CCDS83 MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE6 -KLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFIL
::.:..::.::: ......:: :.... .:: ::: : ::::::.::. .:.. ::
CCDS83 NKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNIL
70 80 90 100 110 120
120 130 140 150 160
pF1KE6 DEFIIGGEIQETSKKIAVKAIEDSDMLQENRL----SPRGRDCSEPRSCHCTLA
:...:: . ::. . : :. .. :.... :::
CCDS83 AEMVMGGMVLETNMNEIVTQIDAQNKLEKSETFIFQSPRQDR
130 140 150 160
164 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 10:10:31 2016 done: Tue Nov 8 10:10:31 2016
Total Scan time: 1.450 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]