Result of FASTA (omim) for
pFN21AE6116
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6116, 146 aa
1>>>pF1KE6116 146 - 146 aa - 146 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8704+/-0.000301; mu= 14.9544+/- 0.019
mean_var=79.8082+/-15.529, 0's: 0 Z-trim(118.4): 73 B-trim: 240 in 1/53
Lambda= 0.143566
statistics sampled from 31145 (31234) to 31145 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.755), E-opt: 0.2 (0.366), width: 16
Scan time: 3.660
The best scores are: opt bits E(85289)
NP_644808 (OMIM: 607788,613625) multiple coagulati ( 146) 988 213.2 1.2e-55
NP_001164979 (OMIM: 607788,613625) multiple coagul ( 146) 988 213.2 1.2e-55
NP_001164978 (OMIM: 607788,613625) multiple coagul ( 146) 988 213.2 1.2e-55
NP_001164977 (OMIM: 607788,613625) multiple coagul ( 146) 988 213.2 1.2e-55
NP_001164982 (OMIM: 607788,613625) multiple coagul ( 127) 639 140.8 6.4e-34
NP_001164981 (OMIM: 607788,613625) multiple coagul ( 94) 623 137.4 5.2e-33
NP_001164980 (OMIM: 607788,613625) multiple coagul ( 94) 623 137.4 5.2e-33
NP_001025052 (OMIM: 610646) calcium and integrin-b ( 185) 150 39.7 0.0026
XP_011530816 (OMIM: 610646) PREDICTED: calcium and ( 201) 150 39.7 0.0027
NP_006560 (OMIM: 606137) cell growth regulator wit ( 318) 149 39.7 0.0043
NP_001159711 (OMIM: 606137) cell growth regulator ( 318) 149 39.7 0.0043
XP_016858818 (OMIM: 610646) PREDICTED: calcium and ( 162) 140 37.6 0.0098
>>NP_644808 (OMIM: 607788,613625) multiple coagulation f (146 aa)
initn: 988 init1: 988 opt: 988 Z-score: 1119.9 bits: 213.2 E(85289): 1.2e-55
Smith-Waterman score: 988; 100.0% identity (100.0% similar) in 146 aa overlap (1-146:1-146)
10 20 30 40 50 60
pF1KE6 MTMRSLLRTPFLCGLLWAFCAPGARAEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_644 MTMRSLLRTPFLCGLLWAFCAPGARAEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 NKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_644 NKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINI
70 80 90 100 110 120
130 140
pF1KE6 IDGVLRDDDKNNDGYIDYAEFAKSLQ
::::::::::::::::::::::::::
NP_644 IDGVLRDDDKNNDGYIDYAEFAKSLQ
130 140
>>NP_001164979 (OMIM: 607788,613625) multiple coagulatio (146 aa)
initn: 988 init1: 988 opt: 988 Z-score: 1119.9 bits: 213.2 E(85289): 1.2e-55
Smith-Waterman score: 988; 100.0% identity (100.0% similar) in 146 aa overlap (1-146:1-146)
10 20 30 40 50 60
pF1KE6 MTMRSLLRTPFLCGLLWAFCAPGARAEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTMRSLLRTPFLCGLLWAFCAPGARAEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 NKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINI
70 80 90 100 110 120
130 140
pF1KE6 IDGVLRDDDKNNDGYIDYAEFAKSLQ
::::::::::::::::::::::::::
NP_001 IDGVLRDDDKNNDGYIDYAEFAKSLQ
130 140
>>NP_001164978 (OMIM: 607788,613625) multiple coagulatio (146 aa)
initn: 988 init1: 988 opt: 988 Z-score: 1119.9 bits: 213.2 E(85289): 1.2e-55
Smith-Waterman score: 988; 100.0% identity (100.0% similar) in 146 aa overlap (1-146:1-146)
10 20 30 40 50 60
pF1KE6 MTMRSLLRTPFLCGLLWAFCAPGARAEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTMRSLLRTPFLCGLLWAFCAPGARAEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 NKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINI
70 80 90 100 110 120
130 140
pF1KE6 IDGVLRDDDKNNDGYIDYAEFAKSLQ
::::::::::::::::::::::::::
NP_001 IDGVLRDDDKNNDGYIDYAEFAKSLQ
130 140
>>NP_001164977 (OMIM: 607788,613625) multiple coagulatio (146 aa)
initn: 988 init1: 988 opt: 988 Z-score: 1119.9 bits: 213.2 E(85289): 1.2e-55
Smith-Waterman score: 988; 100.0% identity (100.0% similar) in 146 aa overlap (1-146:1-146)
10 20 30 40 50 60
pF1KE6 MTMRSLLRTPFLCGLLWAFCAPGARAEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTMRSLLRTPFLCGLLWAFCAPGARAEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 NKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINI
70 80 90 100 110 120
130 140
pF1KE6 IDGVLRDDDKNNDGYIDYAEFAKSLQ
::::::::::::::::::::::::::
NP_001 IDGVLRDDDKNNDGYIDYAEFAKSLQ
130 140
>>NP_001164982 (OMIM: 607788,613625) multiple coagulatio (127 aa)
initn: 639 init1: 639 opt: 639 Z-score: 730.0 bits: 140.8 E(85289): 6.4e-34
Smith-Waterman score: 639; 87.6% identity (92.0% similar) in 113 aa overlap (34-146:15-127)
10 20 30 40 50 60
pF1KE6 RSLLRTPFLCGLLWAFCAPGARAEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVINKP
:: : .... .:::::::::::::
NP_001 MLSVCSCRTSSGMRSQWPSARQRSSSLSTFRHIMEHLEGVINKP
10 20 30 40
70 80 90 100 110 120
pF1KE6 EAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDG
50 60 70 80 90 100
130 140
pF1KE6 VLRDDDKNNDGYIDYAEFAKSLQ
:::::::::::::::::::::::
NP_001 VLRDDDKNNDGYIDYAEFAKSLQ
110 120
>>NP_001164981 (OMIM: 607788,613625) multiple coagulatio (94 aa)
initn: 623 init1: 623 opt: 623 Z-score: 713.7 bits: 137.4 E(85289): 5.2e-33
Smith-Waterman score: 623; 100.0% identity (100.0% similar) in 94 aa overlap (53-146:1-94)
30 40 50 60 70 80
pF1KE6 GARAEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDY
::::::::::::::::::::::::::::::
NP_001 MEHLEGVINKPEAEMSPQELQLHYFKMHDY
10 20 30
90 100 110 120 130 140
pF1KE6 DGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFA
40 50 60 70 80 90
pF1KE6 KSLQ
::::
NP_001 KSLQ
>>NP_001164980 (OMIM: 607788,613625) multiple coagulatio (94 aa)
initn: 623 init1: 623 opt: 623 Z-score: 713.7 bits: 137.4 E(85289): 5.2e-33
Smith-Waterman score: 623; 100.0% identity (100.0% similar) in 94 aa overlap (53-146:1-94)
30 40 50 60 70 80
pF1KE6 GARAEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDY
::::::::::::::::::::::::::::::
NP_001 MEHLEGVINKPEAEMSPQELQLHYFKMHDY
10 20 30
90 100 110 120 130 140
pF1KE6 DGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFA
40 50 60 70 80 90
pF1KE6 KSLQ
::::
NP_001 KSLQ
>>NP_001025052 (OMIM: 610646) calcium and integrin-bindi (185 aa)
initn: 139 init1: 90 opt: 150 Z-score: 180.5 bits: 39.7 E(85289): 0.0026
Smith-Waterman score: 150; 24.3% identity (61.2% similar) in 152 aa overlap (6-145:23-168)
10 20 30 40
pF1KE6 MTMRSLLRTPFLC--GLLWAFCAPGARAEEPAASFSQPGSM-G
: :. .:: . .: :: .: . ...: .:. .
NP_001 MGQCLRYQMHWEDLEEYQALTFLTRNEILCIHDTFLKLCPPGKYYKEATLTMDQVSSLPA
10 20 30 40 50 60
50 60 70 80 90
pF1KE6 LDKNTVHDQ-EHIMEH-----LEGVINKPE--AEMSPQELQLHY-FKMHDYDGNNLLDGL
: : .:. ... : .: :.. .:.. :...: :...:.. :...:
NP_001 LRVNPFRDRICRVFSHKGMFSFEDVLGMASVFSEQACPSLKIEYAFRIYDFNENGFIDEE
70 80 90 100 110 120
100 110 120 130 140
pF1KE6 ELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSLQ
.:. : .. . . :::: :... . :: ..: .::......:: ...
NP_001 DLQRIILRLLNSDD------MSEDLLMDLTNHVLSESDLDNDNMLSFSEFEHAMAKSPDF
130 140 150 160 170
NP_001 MNSFRIHFWGC
180
>>XP_011530816 (OMIM: 610646) PREDICTED: calcium and int (201 aa)
initn: 125 init1: 90 opt: 150 Z-score: 180.1 bits: 39.7 E(85289): 0.0027
Smith-Waterman score: 150; 24.3% identity (61.2% similar) in 152 aa overlap (6-145:39-184)
10 20 30
pF1KE6 MTMRSLLRTPFLC--GLLWAFCAPGARAEEPAASF
: :. .:: . .: :: .: . ..
XP_011 GGPGRVPGATAGMNGVDTSLLCDLLQALTFLTRNEILCIHDTFLKLCPPGKYYKEATLTM
10 20 30 40 50 60
40 50 60 70 80
pF1KE6 SQPGSM-GLDKNTVHDQ-EHIMEH-----LEGVINKPE--AEMSPQELQLHY-FKMHDYD
.: .:. .: : .:. ... : .: :.. .:.. :...: :...:..
XP_011 DQVSSLPALRVNPFRDRICRVFSHKGMFSFEDVLGMASVFSEQACPSLKIEYAFRIYDFN
70 80 90 100 110 120
90 100 110 120 130 140
pF1KE6 GNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAK
:...: .:. : .. . . :::: :... . :: ..: .::......:: .
XP_011 ENGFIDEEDLQRIILRLLNSDD------MSEDLLMDLTNHVLSESDLDNDNMLSFSEFEH
130 140 150 160 170 180
pF1KE6 SLQ
..
XP_011 AMAKSPDFMNSFRIHFWGC
190 200
>>NP_006560 (OMIM: 606137) cell growth regulator with EF (318 aa)
initn: 105 init1: 73 opt: 149 Z-score: 176.5 bits: 39.7 E(85289): 0.0043
Smith-Waterman score: 149; 32.3% identity (66.7% similar) in 93 aa overlap (52-141:51-139)
30 40 50 60 70
pF1KE6 PGARAEEPAASFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEM---SPQELQLHYFK
.. .:.: ... :... : ... :. :
NP_006 PKDGVTRPDSEVQHQLLPNPFQPGQEQLGLLQSYLKG-LGRTEVQLEHLSREQVLLYLFA
30 40 50 60 70
80 90 100 110 120 130
pF1KE6 MHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDY
.:::: .. :::::: . .: . :. ..: . . .: :.: ::. .: :.:: .
NP_006 LHDYDQSGQLDGLELLSMLTAALAP-GAANSP--TTNPVILIVDKVLETQDLNGDGLMTP
80 90 100 110 120 130
140
pF1KE6 AEFAKSLQ
::.
NP_006 AELINFPGVALRHVEPGEPLAPSPQEPQAVGRQSLLAKSPLRQETQEAPGPREEAKGQVE
140 150 160 170 180 190
146 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 09:35:07 2016 done: Tue Nov 8 09:35:08 2016
Total Scan time: 3.660 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]