Result of FASTA (ccds) for
pFN21AE5807
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5807, 1406 aa
1>>>pF1KE5807 1406 - 1406 aa - 1406 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.2774+/-0.00132; mu= -2.2999+/- 0.079
mean_var=388.4303+/-83.625, 0's: 0 Z-trim(110.3): 151 B-trim: 479 in 2/53
Lambda= 0.065076
statistics sampled from 11348 (11476) to 11348 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.353), width: 16
Scan time: 5.590
The best scores are: opt bits E(32554)
CCDS43789.1 CNTLN gene_id:54875|Hs108|chr9 (1406) 8805 842.4 0
CCDS47953.1 CNTLN gene_id:54875|Hs108|chr9 ( 391) 2429 243.3 1e-63
>>CCDS43789.1 CNTLN gene_id:54875|Hs108|chr9 (1406 aa)
initn: 8805 init1: 8805 opt: 8805 Z-score: 4485.4 bits: 842.4 E(32554): 0
Smith-Waterman score: 8805; 100.0% identity (100.0% similar) in 1406 aa overlap (1-1406:1-1406)
10 20 30 40 50 60
pF1KE5 MAARSPPSPHPSPPARQLGPRSPRVGRGAEVHAMRSEASGFAGAAREVVADESDKIWVGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MAARSPPSPHPSPPARQLGPRSPRVGRGAEVHAMRSEASGFAGAAREVVADESDKIWVGE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 EGSGGRRGPGGAAPAHAPLLSAPMGSRRLEGISVEEAMVTRTQLLEEELSSLKEELALCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EGSGGRRGPGGAAPAHAPLLSAPMGSRRLEGISVEEAMVTRTQLLEEELSSLKEELALCQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ADKEFVWSLWKRLQVTNPDLTQVVSLVVEREKQKSEAKDRKVLEILQVKDAKIQEFEQRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ADKEFVWSLWKRLQVTNPDLTQVVSLVVEREKQKSEAKDRKVLEILQVKDAKIQEFEQRE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SVLKQEINDLVKRKIAVDEENAFLRKEFSDLEKKFKDKSQEIKDTKECVQNKEEQNRLVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SVLKQEINDLVKRKIAVDEENAFLRKEFSDLEKKFKDKSQEIKDTKECVQNKEEQNRLVI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 KNLEEENKKLSTRCTDLLNDLEKLRKQEAHLRKEKYSTDAKIKTFEDNLIEARKEVEVSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KNLEEENKKLSTRCTDLLNDLEKLRKQEAHLRKEKYSTDAKIKTFEDNLIEARKEVEVSQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 SKYNALSLQLSNKQTELIQKDMDITLVRKELQELQNLYKQNSTHTAQQAELIQQLQVLNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SKYNALSLQLSNKQTELIQKDMDITLVRKELQELQNLYKQNSTHTAQQAELIQQLQVLNM
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 DTQKVLRNQEDVHTAESISYQKLYNELHICFETTKSNEAMLRQSVTNLQDQLLQKEQENA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DTQKVLRNQEDVHTAESISYQKLYNELHICFETTKSNEAMLRQSVTNLQDQLLQKEQENA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 KLKEKLQESQGAPLPLPQESDPDYSAQVPHRPSLSSLETLMVSQKSEIEYLQEKLKIANE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KLKEKLQESQGAPLPLPQESDPDYSAQVPHRPSLSSLETLMVSQKSEIEYLQEKLKIANE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 KLSENISANKGFSRKSIMTSAEGKHKEPPVKRSRSLSPKSSFTDSEELQKLRKAERKIEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KLSENISANKGFSRKSIMTSAEGKHKEPPVKRSRSLSPKSSFTDSEELQKLRKAERKIEN
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 LEKALQLKSQENDELRDAHEKRKERLQMLQTNYRAVKEQLKQWEEGSGMTEIRKIKRADP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LEKALQLKSQENDELRDAHEKRKERLQMLQTNYRAVKEQLKQWEEGSGMTEIRKIKRADP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE5 QQLRQEDSDAVWNELAYFKRENQELMIQKMNLEEELDELKVHISIDKAAIQELNRCVAER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QQLRQEDSDAVWNELAYFKRENQELMIQKMNLEEELDELKVHISIDKAAIQELNRCVAER
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE5 REEQLFRSGEDDEVKRSTPEKNGKEMLEQTLQKVTELENRLKSFEKRSRKLKEGNKKLMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 REEQLFRSGEDDEVKRSTPEKNGKEMLEQTLQKVTELENRLKSFEKRSRKLKEGNKKLMK
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE5 ENDFLKSLLKQQQEDTETREKELEQIIKGSKDVEKENTELQVKISELETEVTSLRRQVAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ENDFLKSLLKQQQEDTETREKELEQIIKGSKDVEKENTELQVKISELETEVTSLRRQVAE
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE5 ANALRNENEELINPMEKSHQSADRAKSEMATMKVRSGRYDCKTTMTKVKFKAAKKNCSVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ANALRNENEELINPMEKSHQSADRAKSEMATMKVRSGRYDCKTTMTKVKFKAAKKNCSVG
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE5 RHHTVLNHSIKVMSNVFENLSKDGWEDVSESSSDSEAQTSQTLGTIIVETSQKISPTEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RHHTVLNHSIKVMSNVFENLSKDGWEDVSESSSDSEAQTSQTLGTIIVETSQKISPTEDG
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE5 KDQKESDPTEDSQTQGKEIVQTYLNIDGKTPKDYFHDKNAKKPTFQKKNCKMQKSSHTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KDQKESDPTEDSQTQGKEIVQTYLNIDGKTPKDYFHDKNAKKPTFQKKNCKMQKSSHTAV
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE5 PTRVNREKYKNITAQKSSSNIILLRERIISLQQQNSVLQNAKKTAELSVKEYKEVNEKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PTRVNREKYKNITAQKSSSNIILLRERIISLQQQNSVLQNAKKTAELSVKEYKEVNEKLL
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE5 HQQQVSDQRFQTSRQTIKKLNLDLAGLRKEKEDLLKKLESSSEITSLAEENSQVTFPRIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 HQQQVSDQRFQTSRQTIKKLNLDLAGLRKEKEDLLKKLESSSEITSLAEENSQVTFPRIQ
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE5 VTSLSPSRSMDLEMKQLQYKLKNATNELTKQSSNVKTLKFELLAKEEHIKEMHEKISRME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VTSLSPSRSMDLEMKQLQYKLKNATNELTKQSSNVKTLKFELLAKEEHIKEMHEKISRME
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE5 RDITMKRHLIEDLKFRQKVNLESNKSFSEMLQNLDKKVKTLTEECSNKKVSIDSLKQRLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RDITMKRHLIEDLKFRQKVNLESNKSFSEMLQNLDKKVKTLTEECSNKKVSIDSLKQRLN
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE5 VAVKEKSQYEQMYQKSKEELEKKDLKLTLLVSRISETESAMAEIETAASKQLQELALQSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VAVKEKSQYEQMYQKSKEELEKKDLKLTLLVSRISETESAMAEIETAASKQLQELALQSE
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE5 QVLEGAQKTLLLANEKVEEFTTFVKALAKELQNDVHVVRRQIRELKKMKKNRDACKTSTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QVLEGAQKTLLLANEKVEEFTTFVKALAKELQNDVHVVRRQIRELKKMKKNRDACKTSTH
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KE5 KAQTLAASILNISRSDLEEILDTEDQVEIEKTKIDAENDKEWMLYIQKLLEGQLPFASYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KAQTLAASILNISRSDLEEILDTEDQVEIEKTKIDAENDKEWMLYIQKLLEGQLPFASYL
1330 1340 1350 1360 1370 1380
1390 1400
pF1KE5 LEAVLEKINEKKKLVEGYFTIMKDIR
::::::::::::::::::::::::::
CCDS43 LEAVLEKINEKKKLVEGYFTIMKDIR
1390 1400
>>CCDS47953.1 CNTLN gene_id:54875|Hs108|chr9 (391 aa)
initn: 2427 init1: 2427 opt: 2429 Z-score: 1257.6 bits: 243.3 E(32554): 1e-63
Smith-Waterman score: 2429; 98.2% identity (98.5% similar) in 391 aa overlap (1-391:1-385)
10 20 30 40 50 60
pF1KE5 MAARSPPSPHPSPPARQLGPRSPRVGRGAEVHAMRSEASGFAGAAREVVADESDKIWVGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MAARSPPSPHPSPPARQLGPRSPRVGRGAEVHAMRSEASGFAGAAREVVADESDKIWVGE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 EGSGGRRGPGGAAPAHAPLLSAPMGSRRLEGISVEEAMVTRTQLLEEELSSLKEELALCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EGSGGRRGPGGAAPAHAPLLSAPMGSRRLEGISVEEAMVTRTQLLEEELSSLKEELALCQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ADKEFVWSLWKRLQVTNPDLTQVVSLVVEREKQKSEAKDRKVLEILQVKDAKIQEFEQRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ADKEFVWSLWKRLQVTNPDLTQVVSLVVEREKQKSEAKDRKVLEILQVKDAKIQEFEQRE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SVLKQEINDLVKRKIAVDEENAFLRKEFSDLEKKFKDKSQEIKDTKECVQNKEEQNRLVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SVLKQEINDLVKRKIAVDEENAFLRKEFSDLEKKFKDKSQEIKDTKECVQNKEEQNRLVI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 KNLEEENKKLSTRCTDLLNDLEKLRKQEAHLRKEKYSTDAKIKTFEDNLIEARKEVEVSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KNLEEENKKLSTRCTDLLNDLEKLRKQEAHLRKEKYSTDAKIKTFEDNLIEARKEVEVSQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 SKYNALSLQLSNKQTELIQKDMDITLVRKELQELQNLYKQNSTHTAQQAELIQQLQVLNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SKYNALSLQLSNKQTELIQKDMDITLVRKELQELQNLYKQNSTHTAQQAELIQQLQVLNM
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 DTQKVLRNQEDVHTAESISYQKLYNELHICFETTKSNEAMLRQSVTNLQDQLLQKEQENA
:::::::::::::::::::::: .::
CCDS47 DTQKVLRNQEDVHTAESISYQK------VCFYSVIKM
370 380 390
430 440 450 460 470 480
pF1KE5 KLKEKLQESQGAPLPLPQESDPDYSAQVPHRPSLSSLETLMVSQKSEIEYLQEKLKIANE
1406 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 06:47:01 2016 done: Tue Nov 8 06:47:02 2016
Total Scan time: 5.590 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]