Result of FASTA (omim) for
pFN21AE5781
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5781, 644 aa
1>>>pF1KE5781 644 - 644 aa - 644 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1967+/-0.000371; mu= 19.9458+/- 0.023
mean_var=69.6912+/-14.189, 0's: 0 Z-trim(113.6): 281 B-trim: 0 in 0/50
Lambda= 0.153633
statistics sampled from 22659 (22973) to 22659 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.641), E-opt: 0.2 (0.269), width: 16
Scan time: 8.690
The best scores are: opt bits E(85289)
NP_001019799 (OMIM: 602069) neuropilin-1 isoform b ( 644) 4452 996.3 0
NP_001316997 (OMIM: 602069) neuropilin-1 isoform f ( 906) 4433 992.2 0
NP_003864 (OMIM: 602069) neuropilin-1 isoform a pr ( 923) 4433 992.2 0
XP_006717589 (OMIM: 602069) PREDICTED: neuropilin- ( 663) 4428 991.0 0
XP_006717585 (OMIM: 602069) PREDICTED: neuropilin- ( 907) 4428 991.1 0
XP_006717584 (OMIM: 602069) PREDICTED: neuropilin- ( 924) 4428 991.1 0
NP_001231902 (OMIM: 602069) neuropilin-1 isoform e ( 916) 4360 976.0 0
NP_001231901 (OMIM: 602069) neuropilin-1 isoform d ( 917) 4360 976.0 0
XP_011518057 (OMIM: 602069) PREDICTED: neuropilin- ( 656) 4355 974.8 0
XP_016872354 (OMIM: 602069) PREDICTED: neuropilin- ( 899) 4355 974.9 0
XP_006717588 (OMIM: 602069) PREDICTED: neuropilin- ( 888) 4073 912.4 0
XP_006717587 (OMIM: 602069) PREDICTED: neuropilin- ( 889) 4073 912.4 0
NP_001019800 (OMIM: 602069) neuropilin-1 isoform c ( 609) 4070 911.6 0
XP_011518058 (OMIM: 602069) PREDICTED: neuropilin- ( 628) 4065 910.5 0
XP_016872355 (OMIM: 602069) PREDICTED: neuropilin- ( 742) 3136 704.6 3.1e-202
XP_016860677 (OMIM: 602070) PREDICTED: neuropilin- ( 848) 2185 493.9 9.8e-139
XP_016860676 (OMIM: 602070) PREDICTED: neuropilin- ( 853) 2185 493.9 9.9e-139
XP_016860675 (OMIM: 602070) PREDICTED: neuropilin- ( 901) 2185 493.9 1e-138
NP_957719 (OMIM: 602070) neuropilin-2 isoform 5 pr ( 901) 2185 493.9 1e-138
NP_061004 (OMIM: 602070) neuropilin-2 isoform 4 pr ( 906) 2185 493.9 1e-138
NP_958436 (OMIM: 602070) neuropilin-2 isoform 3 pr ( 909) 2185 493.9 1e-138
NP_003863 (OMIM: 602070) neuropilin-2 isoform 2 pr ( 926) 2185 493.9 1.1e-138
XP_016860674 (OMIM: 602070) PREDICTED: neuropilin- ( 926) 2185 493.9 1.1e-138
NP_957718 (OMIM: 602070) neuropilin-2 isoform 1 pr ( 931) 2185 493.9 1.1e-138
XP_005246990 (OMIM: 602070) PREDICTED: neuropilin- ( 931) 2185 493.9 1.1e-138
XP_005246991 (OMIM: 602070) PREDICTED: neuropilin- ( 931) 2185 493.9 1.1e-138
NP_957716 (OMIM: 602070) neuropilin-2 isoform 6 pr ( 555) 1998 452.3 2.1e-126
NP_002584 (OMIM: 600270) procollagen C-endopeptida ( 449) 546 130.4 1.3e-29
NP_005919 (OMIM: 602281) lactadherin isoform a pre ( 387) 541 129.3 2.6e-29
NP_001265571 (OMIM: 606018) EGF-like repeat and di ( 470) 539 128.9 4.1e-29
NP_005702 (OMIM: 606018) EGF-like repeat and disco ( 480) 539 128.9 4.2e-29
NP_001297249 (OMIM: 602281) lactadherin isoform c ( 379) 534 127.7 7.4e-29
NP_001297248 (OMIM: 602281) lactadherin isoform d ( 343) 528 126.4 1.7e-28
NP_001297250 (OMIM: 602281) lactadherin isoform e ( 275) 506 121.4 4.2e-27
XP_011530516 (OMIM: 606742,613087) PREDICTED: toll ( 837) 475 114.9 1.2e-24
XP_016864059 (OMIM: 606742,613087) PREDICTED: toll ( 964) 475 114.9 1.4e-24
NP_036596 (OMIM: 606742,613087) tolloid-like prote (1013) 475 114.9 1.4e-24
XP_011518013 (OMIM: 261100,602997) PREDICTED: cubi (2237) 407 100.1 9.1e-20
XP_011518012 (OMIM: 261100,602997) PREDICTED: cubi (2277) 407 100.1 9.2e-20
XP_011518011 (OMIM: 261100,602997) PREDICTED: cubi (2285) 407 100.1 9.3e-20
XP_011518010 (OMIM: 261100,602997) PREDICTED: cubi (2867) 407 100.2 1.1e-19
NP_963840 (OMIM: 612320) CUB domain-containing pro ( 449) 397 97.4 1.2e-19
NP_001072 (OMIM: 261100,602997) cubilin precursor (3623) 407 100.2 1.3e-19
NP_001108086 (OMIM: 602281) lactadherin isoform b ( 335) 381 93.8 1.1e-18
NP_063916 (OMIM: 134500,300841,306700) coagulation ( 216) 356 88.1 3.6e-17
NP_036597 (OMIM: 606743) tolloid-like protein 2 pr (1015) 358 89.0 9e-17
XP_011542919 (OMIM: 112264,614856) PREDICTED: bone ( 622) 353 87.7 1.3e-16
XP_016869227 (OMIM: 112264,614856) PREDICTED: bone ( 717) 353 87.8 1.5e-16
NP_001190 (OMIM: 112264,614856) bone morphogenetic ( 730) 353 87.8 1.5e-16
XP_006716449 (OMIM: 112264,614856) PREDICTED: bone ( 813) 353 87.8 1.6e-16
>>NP_001019799 (OMIM: 602069) neuropilin-1 isoform b pre (644 aa)
initn: 4452 init1: 4452 opt: 4452 Z-score: 5329.0 bits: 996.3 E(85289): 0
Smith-Waterman score: 4452; 100.0% identity (100.0% similar) in 644 aa overlap (1-644:1-644)
10 20 30 40 50 60
pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
550 560 570 580 590 600
610 620 630 640
pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK
::::::::::::::::::::::::::::::::::::::::::::
NP_001 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK
610 620 630 640
>>NP_001316997 (OMIM: 602069) neuropilin-1 isoform f pre (906 aa)
initn: 4433 init1: 4433 opt: 4433 Z-score: 5304.1 bits: 992.2 E(85289): 0
Smith-Waterman score: 4433; 100.0% identity (100.0% similar) in 641 aa overlap (1-641:1-641)
10 20 30 40 50 60
pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
550 560 570 580 590 600
610 620 630 640
pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK
:::::::::::::::::::::::::::::::::::::::::
NP_001 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSEFPTYGFNCEFGWGSHKTF
610 620 630 640 650 660
NP_001 CHWEHDNHVQLKWSVLTSKTGPIQDHTGDGNFIYSQADENQKGKVARLVSPVVYSQNSAH
670 680 690 700 710 720
>>NP_003864 (OMIM: 602069) neuropilin-1 isoform a precur (923 aa)
initn: 4433 init1: 4433 opt: 4433 Z-score: 5304.0 bits: 992.2 E(85289): 0
Smith-Waterman score: 4433; 100.0% identity (100.0% similar) in 641 aa overlap (1-641:1-641)
10 20 30 40 50 60
pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
550 560 570 580 590 600
610 620 630 640
pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK
:::::::::::::::::::::::::::::::::::::::::
NP_003 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSEFPTYGFNCEFGWGSHKTF
610 620 630 640 650 660
NP_003 CHWEHDNHVQLKWSVLTSKTGPIQDHTGDGNFIYSQADENQKGKVARLVSPVVYSQNSAH
670 680 690 700 710 720
>>XP_006717589 (OMIM: 602069) PREDICTED: neuropilin-1 is (663 aa)
initn: 4428 init1: 4428 opt: 4428 Z-score: 5300.1 bits: 991.0 E(85289): 0
Smith-Waterman score: 4428; 99.8% identity (100.0% similar) in 641 aa overlap (1-641:1-641)
10 20 30 40 50 60
pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
XP_006 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
550 560 570 580 590 600
610 620 630 640
pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK
:::::::::::::::::::::::::::::::::::::::::
XP_006 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSARLEVSTLNLSLHNPPQQK
610 620 630 640 650 660
XP_006 ALI
>>XP_006717585 (OMIM: 602069) PREDICTED: neuropilin-1 is (907 aa)
initn: 4428 init1: 4428 opt: 4428 Z-score: 5298.1 bits: 991.1 E(85289): 0
Smith-Waterman score: 4428; 99.8% identity (100.0% similar) in 641 aa overlap (1-641:1-641)
10 20 30 40 50 60
pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
XP_006 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
550 560 570 580 590 600
610 620 630 640
pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK
:::::::::::::::::::::::::::::::::::::::::
XP_006 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSEFPTYGFNCEFGWGSHKTF
610 620 630 640 650 660
XP_006 CHWEHDNHVQLKWSVLTSKTGPIQDHTAGDGNFIYSQADENQKGKVARLVSPVVYSQNSA
670 680 690 700 710 720
>>XP_006717584 (OMIM: 602069) PREDICTED: neuropilin-1 is (924 aa)
initn: 4428 init1: 4428 opt: 4428 Z-score: 5298.0 bits: 991.1 E(85289): 0
Smith-Waterman score: 4428; 99.8% identity (100.0% similar) in 641 aa overlap (1-641:1-641)
10 20 30 40 50 60
pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
XP_006 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
550 560 570 580 590 600
610 620 630 640
pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK
:::::::::::::::::::::::::::::::::::::::::
XP_006 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSEFPTYGFNCEFGWGSHKTF
610 620 630 640 650 660
XP_006 CHWEHDNHVQLKWSVLTSKTGPIQDHTAGDGNFIYSQADENQKGKVARLVSPVVYSQNSA
670 680 690 700 710 720
>>NP_001231902 (OMIM: 602069) neuropilin-1 isoform e pre (916 aa)
initn: 4274 init1: 4274 opt: 4360 Z-score: 5216.6 bits: 976.0 E(85289): 0
Smith-Waterman score: 4360; 98.9% identity (98.9% similar) in 641 aa overlap (1-641:1-634)
10 20 30 40 50 60
pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
550 560 570 580 590 600
610 620 630 640
pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK
::::::::::::: :::::::::::::::::::::
NP_001 DECDDDQANCHSG-------TGGTTVLATEKPTVIDSTIQSEFPTYGFNCEFGWGSHKTF
610 620 630 640 650
NP_001 CHWEHDNHVQLKWSVLTSKTGPIQDHTGDGNFIYSQADENQKGKVARLVSPVVYSQNSAH
660 670 680 690 700 710
>>NP_001231901 (OMIM: 602069) neuropilin-1 isoform d pre (917 aa)
initn: 4274 init1: 4274 opt: 4360 Z-score: 5216.6 bits: 976.0 E(85289): 0
Smith-Waterman score: 4360; 98.9% identity (98.9% similar) in 641 aa overlap (1-641:1-634)
10 20 30 40 50 60
pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
550 560 570 580 590 600
610 620 630 640
pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK
::::::::::::: :::::::::::::::::::::
NP_001 DECDDDQANCHSG-------TGGTTVLATEKPTVIDSTIQSEFPTYGFNCEFGWGSHKTF
610 620 630 640 650
NP_001 CHWEHDNHVQLKWSVLTSKTGPIQDHTAGDGNFIYSQADENQKGKVARLVSPVVYSQNSA
660 670 680 690 700 710
>>XP_011518057 (OMIM: 602069) PREDICTED: neuropilin-1 is (656 aa)
initn: 4269 init1: 4269 opt: 4355 Z-score: 5212.7 bits: 974.8 E(85289): 0
Smith-Waterman score: 4355; 98.8% identity (98.9% similar) in 641 aa overlap (1-641:1-634)
10 20 30 40 50 60
pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
XP_011 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
550 560 570 580 590 600
610 620 630 640
pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK
::::::::::::: :::::::::::::::::::::
XP_011 DECDDDQANCHSG-------TGGTTVLATEKPTVIDSTIQSARLEVSTLNLSLHNPPQQK
610 620 630 640 650
XP_011 ALI
>>XP_016872354 (OMIM: 602069) PREDICTED: neuropilin-1 is (899 aa)
initn: 4269 init1: 4269 opt: 4355 Z-score: 5210.7 bits: 974.9 E(85289): 0
Smith-Waterman score: 4355; 98.8% identity (98.9% similar) in 641 aa overlap (1-641:1-634)
10 20 30 40 50 60
pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
XP_016 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
550 560 570 580 590 600
610 620 630 640
pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK
::::::::::::: :::::::::::::::::::::
XP_016 DECDDDQANCHSG-------TGGTTVLATEKPTVIDSTIQSEFPTYGFNCEFGWGSHKTF
610 620 630 640 650
XP_016 CHWEHDNHVQLKWSVLTSKTGPIQDHTGDGNFIYSQADENQKGKVARLVSPVVYSQNSAH
660 670 680 690 700 710
644 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 06:35:22 2016 done: Tue Nov 8 06:35:23 2016
Total Scan time: 8.690 Total Display time: 0.150
Function used was FASTA [36.3.4 Apr, 2011]