Result of FASTA (ccds) for
pFN21AE5773
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5773, 601 aa
1>>>pF1KE5773 601 - 601 aa - 601 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.7322+/-0.000808; mu= 5.5697+/- 0.049
mean_var=199.6395+/-39.533, 0's: 0 Z-trim(115.2): 8 B-trim: 0 in 0/53
Lambda= 0.090772
statistics sampled from 15747 (15754) to 15747 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.782), E-opt: 0.2 (0.484), width: 16
Scan time: 4.060
The best scores are: opt bits E(32554)
CCDS54586.1 RBM6 gene_id:10180|Hs108|chr3 ( 601) 4096 548.7 7.9e-156
CCDS2809.1 RBM6 gene_id:10180|Hs108|chr3 (1123) 4096 548.9 1.3e-155
CCDS2810.1 RBM5 gene_id:10181|Hs108|chr3 ( 815) 676 100.9 6.7e-21
CCDS78478.1 RBM10 gene_id:8241|Hs108|chrX ( 852) 592 89.9 1.4e-17
CCDS56600.1 RBM10 gene_id:8241|Hs108|chrX ( 853) 592 89.9 1.4e-17
CCDS14274.1 RBM10 gene_id:8241|Hs108|chrX ( 930) 592 90.0 1.5e-17
CCDS75969.1 RBM10 gene_id:8241|Hs108|chrX ( 995) 592 90.0 1.6e-17
>>CCDS54586.1 RBM6 gene_id:10180|Hs108|chr3 (601 aa)
initn: 4096 init1: 4096 opt: 4096 Z-score: 2911.1 bits: 548.7 E(32554): 7.9e-156
Smith-Waterman score: 4096; 100.0% identity (100.0% similar) in 601 aa overlap (1-601:1-601)
10 20 30 40 50 60
pF1KE5 MIQDKEVTLEYVSSLDFWYCKRCKANIGGHRSSCSFCKNPREVTEAKQELITYPQPQKTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MIQDKEVTLEYVSSLDFWYCKRCKANIGGHRSSCSFCKNPREVTEAKQELITYPQPQKTS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 IPAPLEKQPNQPLRPADKEPEPRKREEGQESRLGHQKREAERYLPPSRREGPTFRRDRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 IPAPLEKQPNQPLRPADKEPEPRKREEGQESRLGHQKREAERYLPPSRREGPTFRRDRER
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ESWSGETRQDGESKTIMLKRIYRSTPPEVIVEVLEPYVRLTTANVRIIKNRTGPMGHTYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ESWSGETRQDGESKTIMLKRIYRSTPPEVIVEVLEPYVRLTTANVRIIKNRTGPMGHTYG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 FIDLDSHAEALRVVKILQNLDPPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 FIDLDSHAEALRVVKILQNLDPPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 RDRRGGGRNSDWSSDTNRQGQQSSSDCYIYDSATGYYYDPLAGTYYDPNTQQEVYVPQDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RDRRGGGRNSDWSSDTNRQGQQSSSDCYIYDSATGYYYDPLAGTYYDPNTQQEVYVPQDP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 GLPEEEEIKEKKPTSQGKSSSKKEMSKRDGKEKKDRGVTRFQENASEGKAPAEDVFKKPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GLPEEEEIKEKKPTSQGKSSSKKEMSKRDGKEKKDRGVTRFQENASEGKAPAEDVFKKPL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 PPTVKKEESPPPPKVVNPLIGLLGEYGGDSDYEEEEEEEQTPPPQPRTAQPQKREEQTKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PPTVKKEESPPPPKVVNPLIGLLGEYGGDSDYEEEEEEEQTPPPQPRTAQPQKREEQTKK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 ENEEDKLTDWNKLACLLCRRQFPNKEVLIKHQQLSDLHKQNLEIHRKIKQSEQELAYLER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ENEEDKLTDWNKLACLLCRRQFPNKEVLIKHQQLSDLHKQNLEIHRKIKQSEQELAYLER
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 REREGKFKGRGNDRREKLQSFDSPERKRIKYSRETDSDRKLVDKEDIDTSSKGGCVQQAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 REREGKFKGRGNDRREKLQSFDSPERKRIKYSRETDSDRKLVDKEDIDTSSKGGCVQQAT
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 GWRKGTGLGYGHPGLASSEEAEGRMRGPSVGASGRTSKRQSNETYRDAVRRVMFARYKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GWRKGTGLGYGHPGLASSEEAEGRMRGPSVGASGRTSKRQSNETYRDAVRRVMFARYKEL
550 560 570 580 590 600
pF1KE5 D
:
CCDS54 D
>>CCDS2809.1 RBM6 gene_id:10180|Hs108|chr3 (1123 aa)
initn: 4096 init1: 4096 opt: 4096 Z-score: 2907.2 bits: 548.9 E(32554): 1.3e-155
Smith-Waterman score: 4096; 100.0% identity (100.0% similar) in 601 aa overlap (1-601:523-1123)
10 20 30
pF1KE5 MIQDKEVTLEYVSSLDFWYCKRCKANIGGH
::::::::::::::::::::::::::::::
CCDS28 NTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIQDKEVTLEYVSSLDFWYCKRCKANIGGH
500 510 520 530 540 550
40 50 60 70 80 90
pF1KE5 RSSCSFCKNPREVTEAKQELITYPQPQKTSIPAPLEKQPNQPLRPADKEPEPRKREEGQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS28 RSSCSFCKNPREVTEAKQELITYPQPQKTSIPAPLEKQPNQPLRPADKEPEPRKREEGQE
560 570 580 590 600 610
100 110 120 130 140 150
pF1KE5 SRLGHQKREAERYLPPSRREGPTFRRDRERESWSGETRQDGESKTIMLKRIYRSTPPEVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS28 SRLGHQKREAERYLPPSRREGPTFRRDRERESWSGETRQDGESKTIMLKRIYRSTPPEVI
620 630 640 650 660 670
160 170 180 190 200 210
pF1KE5 VEVLEPYVRLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLDPPFSIDGKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS28 VEVLEPYVRLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLDPPFSIDGKM
680 690 700 710 720 730
220 230 240 250 260 270
pF1KE5 VAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGGRNSDWSSDTNRQGQQSSSDCYIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS28 VAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGGRNSDWSSDTNRQGQQSSSDCYIY
740 750 760 770 780 790
280 290 300 310 320 330
pF1KE5 DSATGYYYDPLAGTYYDPNTQQEVYVPQDPGLPEEEEIKEKKPTSQGKSSSKKEMSKRDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS28 DSATGYYYDPLAGTYYDPNTQQEVYVPQDPGLPEEEEIKEKKPTSQGKSSSKKEMSKRDG
800 810 820 830 840 850
340 350 360 370 380 390
pF1KE5 KEKKDRGVTRFQENASEGKAPAEDVFKKPLPPTVKKEESPPPPKVVNPLIGLLGEYGGDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS28 KEKKDRGVTRFQENASEGKAPAEDVFKKPLPPTVKKEESPPPPKVVNPLIGLLGEYGGDS
860 870 880 890 900 910
400 410 420 430 440 450
pF1KE5 DYEEEEEEEQTPPPQPRTAQPQKREEQTKKENEEDKLTDWNKLACLLCRRQFPNKEVLIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS28 DYEEEEEEEQTPPPQPRTAQPQKREEQTKKENEEDKLTDWNKLACLLCRRQFPNKEVLIK
920 930 940 950 960 970
460 470 480 490 500 510
pF1KE5 HQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGKFKGRGNDRREKLQSFDSPERKRIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS28 HQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGKFKGRGNDRREKLQSFDSPERKRIK
980 990 1000 1010 1020 1030
520 530 540 550 560 570
pF1KE5 YSRETDSDRKLVDKEDIDTSSKGGCVQQATGWRKGTGLGYGHPGLASSEEAEGRMRGPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS28 YSRETDSDRKLVDKEDIDTSSKGGCVQQATGWRKGTGLGYGHPGLASSEEAEGRMRGPSV
1040 1050 1060 1070 1080 1090
580 590 600
pF1KE5 GASGRTSKRQSNETYRDAVRRVMFARYKELD
:::::::::::::::::::::::::::::::
CCDS28 GASGRTSKRQSNETYRDAVRRVMFARYKELD
1100 1110 1120
>>CCDS2810.1 RBM5 gene_id:10181|Hs108|chr3 (815 aa)
initn: 1114 init1: 591 opt: 676 Z-score: 488.7 bits: 100.9 E(32554): 6.7e-21
Smith-Waterman score: 827; 31.9% identity (53.7% similar) in 626 aa overlap (117-601:210-815)
90 100 110 120 130 140
pF1KE5 EGQESRLGHQKREAERYLPPSRREGPTFRRDRERESWSGETRQ----DGESKTIMLKRIY
: :.: : :.. : ::.:. :
CCDS28 PKFEDWLCNKCCLNNFRKRLKCFRCGADKFDSEQEVPPGTTESVQSVDYYCDTIILRNIA
180 190 200 210 220 230
150 160 170 180 190 200
pF1KE5 RSTPPEVIVEVLEPYVRLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLDP
: . :. .: ::. :.. :.:.::.. ... ..:..:.: .: ....:::.: :
CCDS28 PHTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQSLHP
240 250 260 270 280 290
210 220
pF1KE5 PFSIDGKMVAVNLATGKRRN-----------------------------DSG-----DHS
:..:::: ..:..: . :.. .:: :.:
CCDS28 PLKIDGKTIGVDFAKSARKDLVLSDGNRVSAFSVASTAIAAAQWSSTQSQSGEGGSVDYS
300 310 320 330 340 350
230 240 250
pF1KE5 ----------DHMHYYQGKKYFRDRRGGGRNSDWSS-----------------------D
.. .: : . : ....:: .:: ::
CCDS28 YLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDASSASGTAVTTTSAAVVSQSPQLYNQT
360 370 380 390 400 410
260 270 280
pF1KE5 TNRQG------QQSSS------------------------DCYIYDSATGYYYDPLAGTY
.: : : :.: . : :: ..:::::: .: :
CCDS28 SNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQYDESSGYYYDPTTGLY
420 430 440 450 460 470
290 300 310 320
pF1KE5 YDPNTQ----------------QEVYVP-------QDPGLPEEEEIKEKKPTSQGKSSSK
::::.: .:.::: :. ::: .: :::: ..:....
CCDS28 YDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQSGLPPAKEGKEKKEKPKSKTAQQ
480 490 500 510 520 530
330 340 350 360 370
pF1KE5 --KEM---SKRDGKEKKD-----RGVTRFQENASEGKAPAEDVFKKPLPPTVKKEESPPP
:.: .: .:.:.. . :. ..:. . .: :. : . :..
CCDS28 IAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGFALFEKKGALAERQQLI
540 550 560 570 580 590
380 390 400 410 420
pF1KE5 PKVV------NPLI-GLLGEYGGDSDYEEEEEEEQTPPPQPRTAQPQKREEQTKKENEED
:..: ::: ::.. :.:::: ::: : . :.::.
CCDS28 PELVRNGDEENPLKRGLVAAYSGDSDNEEELVE--------------------RLESEEE
600 610 620 630
430 440 450 460 470 480
pF1KE5 KLTDWNKLACLLCRRQFPNKEVLIKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREG
::.::.:.::::::::::::..:..:::::::::::..:.:. . ::::: :: ::::
CCDS28 KLADWKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREM
640 650 660 670 680 690
490 500 510 520 530 540
pF1KE5 KFKGRGNDRREKLQSFDSPERKRIKYSRETDSDRKLVDKEDIDTSSKGGCVQQATGWRKG
:.. :. .:::: . :: :: : . . :. :: :. :. . :: :::.:
CCDS28 KYRDRAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREG
700 710 720 730 740 750
550 560 570 580 590 600
pF1KE5 TGLGYGHPGLASSEEAEGRMRGPSVGASGRTSKRQSNETYRDAVRRVMFARYKELD
.::: :... ::. :..: ..::.: . .. ..:.::::..::::. :..
CCDS28 SGLGRKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME
760 770 780 790 800 810
>>CCDS78478.1 RBM10 gene_id:8241|Hs108|chrX (852 aa)
initn: 745 init1: 295 opt: 592 Z-score: 429.0 bits: 89.9 E(32554): 1.4e-17
Smith-Waterman score: 673; 35.6% identity (64.1% similar) in 357 aa overlap (268-599:494-850)
240 250 260 270 280 290
pF1KE5 KYFRDRRGGGRNSDWSSDTNRQGQQSSSDCYIYDSATGYYYDPLAGTYYDPNTQQEVYVP
: :: ..:::::: .: :::::.: .
CCDS78 PTHPSSALPPATSPTAQESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQ
470 480 490 500 510 520
300 310 320 330 340 350
pF1KE5 QDPGLPEEEEIKEKKPTSQGKSSSKKEMS--KRDGKEKKDRGVTRF-QENASEGKAPAED
.. : . : . :. . .....:: . ...:::::.. :. :. :.. . :..
CCDS78 SQQYLYWDGERRTYVPALEQSADGHKETGAPSKEGKEKKEKHKTKTAQQIAKDMERWARS
530 540 550 560 570 580
360 370 380 390 400
pF1KE5 V------FKKPLPP--TVKKEE-----SPPPPKVVNPLIGLLGEYGGDS-DYEEEEEEEQ
. ::. . : ... .: . .. : :.: : : . ...
CCDS78 LNKQKENFKNSFQPISSLRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDR
590 600 610 620 630 640
410 420 430 440 450
pF1KE5 TPPPQPRTA----QPQKREEQTKKENE-EDKLTDWNKLACLLCRRQFPNKEVLIKHQQLS
::. .: . ...::: . : :.:::::.::::::::::::.::.::.:::::
CCDS78 PSPPRGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLS
650 660 670 680 690 700
460 470 480 490 500 510
pF1KE5 DLHKQNLEIHRKIKQSEQELAYLERREREG-KFKGRGNDRREKLQSFDSPERKRIKYS--
::::::::::. . ::.:: ::. . : :.. :. .:::: . :: :: ::.
CCDS78 GLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGI
710 720 730 740 750 760
520 530 540 550 560 570
pF1KE5 RETDSDRKLVDKEDIDTSSKGGCVQQATGWRKGTGLGYGHPGLASSEEAEGRMRGPSVGA
.. : . .. . ... :. . :: ::..:.::: . :... ::. :.:: ..::
CCDS78 STASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA
770 780 790 800 810 820
580 590 600
pF1KE5 SGRTSKRQSNETYRDAVRRVMFARYKELD
: . :.:.:.......: .:..:
CCDS78 RGSSYGVTSTESYKETLHKTMVTRFNEAQ
830 840 850
>>CCDS56600.1 RBM10 gene_id:8241|Hs108|chrX (853 aa)
initn: 853 init1: 295 opt: 592 Z-score: 429.0 bits: 89.9 E(32554): 1.4e-17
Smith-Waterman score: 673; 35.6% identity (64.1% similar) in 357 aa overlap (268-599:495-851)
240 250 260 270 280 290
pF1KE5 KYFRDRRGGGRNSDWSSDTNRQGQQSSSDCYIYDSATGYYYDPLAGTYYDPNTQQEVYVP
: :: ..:::::: .: :::::.: .
CCDS56 PTHPSSALPPATSPTAQESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQ
470 480 490 500 510 520
300 310 320 330 340 350
pF1KE5 QDPGLPEEEEIKEKKPTSQGKSSSKKEMS--KRDGKEKKDRGVTRF-QENASEGKAPAED
.. : . : . :. . .....:: . ...:::::.. :. :. :.. . :..
CCDS56 SQQYLYWDGERRTYVPALEQSADGHKETGAPSKEGKEKKEKHKTKTAQQIAKDMERWARS
530 540 550 560 570 580
360 370 380 390 400
pF1KE5 V------FKKPLPP--TVKKEE-----SPPPPKVVNPLIGLLGEYGGDS-DYEEEEEEEQ
. ::. . : ... .: . .. : :.: : : . ...
CCDS56 LNKQKENFKNSFQPISSLRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDR
590 600 610 620 630 640
410 420 430 440 450
pF1KE5 TPPPQPRTA----QPQKREEQTKKENE-EDKLTDWNKLACLLCRRQFPNKEVLIKHQQLS
::. .: . ...::: . : :.:::::.::::::::::::.::.::.:::::
CCDS56 PSPPRGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLS
650 660 670 680 690 700
460 470 480 490 500 510
pF1KE5 DLHKQNLEIHRKIKQSEQELAYLERREREG-KFKGRGNDRREKLQSFDSPERKRIKYS--
::::::::::. . ::.:: ::. . : :.. :. .:::: . :: :: ::.
CCDS56 GLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGI
710 720 730 740 750 760
520 530 540 550 560 570
pF1KE5 RETDSDRKLVDKEDIDTSSKGGCVQQATGWRKGTGLGYGHPGLASSEEAEGRMRGPSVGA
.. : . .. . ... :. . :: ::..:.::: . :... ::. :.:: ..::
CCDS56 STASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA
770 780 790 800 810 820
580 590 600
pF1KE5 SGRTSKRQSNETYRDAVRRVMFARYKELD
: . :.:.:.......: .:..:
CCDS56 RGSSYGVTSTESYKETLHKTMVTRFNEAQ
830 840 850
>>CCDS14274.1 RBM10 gene_id:8241|Hs108|chrX (930 aa)
initn: 799 init1: 295 opt: 592 Z-score: 428.5 bits: 90.0 E(32554): 1.5e-17
Smith-Waterman score: 673; 35.6% identity (64.1% similar) in 357 aa overlap (268-599:572-928)
240 250 260 270 280 290
pF1KE5 KYFRDRRGGGRNSDWSSDTNRQGQQSSSDCYIYDSATGYYYDPLAGTYYDPNTQQEVYVP
: :: ..:::::: .: :::::.: .
CCDS14 PTHPSSALPPATSPTAQESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQ
550 560 570 580 590 600
300 310 320 330 340 350
pF1KE5 QDPGLPEEEEIKEKKPTSQGKSSSKKEMS--KRDGKEKKDRGVTRF-QENASEGKAPAED
.. : . : . :. . .....:: . ...:::::.. :. :. :.. . :..
CCDS14 SQQYLYWDGERRTYVPALEQSADGHKETGAPSKEGKEKKEKHKTKTAQQIAKDMERWARS
610 620 630 640 650 660
360 370 380 390 400
pF1KE5 V------FKKPLPP--TVKKEE-----SPPPPKVVNPLIGLLGEYGGDS-DYEEEEEEEQ
. ::. . : ... .: . .. : :.: : : . ...
CCDS14 LNKQKENFKNSFQPISSLRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDR
670 680 690 700 710 720
410 420 430 440 450
pF1KE5 TPPPQPRTA----QPQKREEQTKKENE-EDKLTDWNKLACLLCRRQFPNKEVLIKHQQLS
::. .: . ...::: . : :.:::::.::::::::::::.::.::.:::::
CCDS14 PSPPRGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLS
730 740 750 760 770 780
460 470 480 490 500 510
pF1KE5 DLHKQNLEIHRKIKQSEQELAYLERREREG-KFKGRGNDRREKLQSFDSPERKRIKYS--
::::::::::. . ::.:: ::. . : :.. :. .:::: . :: :: ::.
CCDS14 GLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGI
790 800 810 820 830 840
520 530 540 550 560 570
pF1KE5 RETDSDRKLVDKEDIDTSSKGGCVQQATGWRKGTGLGYGHPGLASSEEAEGRMRGPSVGA
.. : . .. . ... :. . :: ::..:.::: . :... ::. :.:: ..::
CCDS14 STASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA
850 860 870 880 890 900
580 590 600
pF1KE5 SGRTSKRQSNETYRDAVRRVMFARYKELD
: . :.:.:.......: .:..:
CCDS14 RGSSYGVTSTESYKETLHKTMVTRFNEAQ
910 920 930
>>CCDS75969.1 RBM10 gene_id:8241|Hs108|chrX (995 aa)
initn: 799 init1: 295 opt: 592 Z-score: 428.0 bits: 90.0 E(32554): 1.6e-17
Smith-Waterman score: 673; 35.6% identity (64.1% similar) in 357 aa overlap (268-599:637-993)
240 250 260 270 280 290
pF1KE5 KYFRDRRGGGRNSDWSSDTNRQGQQSSSDCYIYDSATGYYYDPLAGTYYDPNTQQEVYVP
: :: ..:::::: .: :::::.: .
CCDS75 PTHPSSALPPATSPTAQESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQ
610 620 630 640 650 660
300 310 320 330 340 350
pF1KE5 QDPGLPEEEEIKEKKPTSQGKSSSKKEMS--KRDGKEKKDRGVTRF-QENASEGKAPAED
.. : . : . :. . .....:: . ...:::::.. :. :. :.. . :..
CCDS75 SQQYLYWDGERRTYVPALEQSADGHKETGAPSKEGKEKKEKHKTKTAQQIAKDMERWARS
670 680 690 700 710 720
360 370 380 390 400
pF1KE5 V------FKKPLPP--TVKKEE-----SPPPPKVVNPLIGLLGEYGGDS-DYEEEEEEEQ
. ::. . : ... .: . .. : :.: : : . ...
CCDS75 LNKQKENFKNSFQPISSLRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDR
730 740 750 760 770 780
410 420 430 440 450
pF1KE5 TPPPQPRTA----QPQKREEQTKKENE-EDKLTDWNKLACLLCRRQFPNKEVLIKHQQLS
::. .: . ...::: . : :.:::::.::::::::::::.::.::.:::::
CCDS75 PSPPRGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLS
790 800 810 820 830 840
460 470 480 490 500 510
pF1KE5 DLHKQNLEIHRKIKQSEQELAYLERREREG-KFKGRGNDRREKLQSFDSPERKRIKYS--
::::::::::. . ::.:: ::. . : :.. :. .:::: . :: :: ::.
CCDS75 GLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGI
850 860 870 880 890 900
520 530 540 550 560 570
pF1KE5 RETDSDRKLVDKEDIDTSSKGGCVQQATGWRKGTGLGYGHPGLASSEEAEGRMRGPSVGA
.. : . .. . ... :. . :: ::..:.::: . :... ::. :.:: ..::
CCDS75 STASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA
910 920 930 940 950 960
580 590 600
pF1KE5 SGRTSKRQSNETYRDAVRRVMFARYKELD
: . :.:.:.......: .:..:
CCDS75 RGSSYGVTSTESYKETLHKTMVTRFNEAQ
970 980 990
601 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 06:31:29 2016 done: Tue Nov 8 06:31:30 2016
Total Scan time: 4.060 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]