Result of FASTA (ccds) for
pFN21AE5761
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5761, 811 aa
1>>>pF1KE5761 811 - 811 aa - 811 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.2620+/-0.000948; mu= 3.2655+/- 0.057
mean_var=234.9963+/-48.189, 0's: 0 Z-trim(112.3): 38 B-trim: 135 in 1/53
Lambda= 0.083665
statistics sampled from 13048 (13066) to 13048 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.739), E-opt: 0.2 (0.401), width: 16
Scan time: 3.890
The best scores are: opt bits E(32554)
CCDS54520.1 EIF4ENIF1 gene_id:56478|Hs108|chr22 ( 811) 5397 665.0 1.4e-190
CCDS13898.1 EIF4ENIF1 gene_id:56478|Hs108|chr22 ( 985) 3220 402.3 2e-111
>>CCDS54520.1 EIF4ENIF1 gene_id:56478|Hs108|chr22 (811 aa)
initn: 5397 init1: 5397 opt: 5397 Z-score: 3535.2 bits: 665.0 E(32554): 1.4e-190
Smith-Waterman score: 5397; 100.0% identity (100.0% similar) in 811 aa overlap (1-811:1-811)
10 20 30 40 50 60
pF1KE5 MDRRSMGETESGDAFLDLKKPPASKCPHRYTKEELLDIKELPHSKQRPSCLSEKYDSDGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MDRRSMGETESGDAFLDLKKPPASKCPHRYTKEELLDIKELPHSKQRPSCLSEKYDSDGV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 WDPEKWHASLYPASGRSSPVESLKKELDTDRPSLVRRIVGIVECNGGVAEEDEVEVILAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 WDPEKWHASLYPASGRSSPVESLKKELDTDRPSLVRRIVGIVECNGGVAEEDEVEVILAQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 EPAADQEVPRDAVLPEQSPGDFDFNEFFNLDKVPCLASMIEDVLGEGSVSASRFSRWFSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 EPAADQEVPRDAVLPEQSPGDFDFNEFFNLDKVPCLASMIEDVLGEGSVSASRFSRWFSN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 PSRSGSRSSSLGSTPHEELERLAGLEQAILSPGQNSGNYFAPIPLEDHAENKVDILEMLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PSRSGSRSSSLGSTPHEELERLAGLEQAILSPGQNSGNYFAPIPLEDHAENKVDILEMLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 KAKVDLKPLLSSLSANKEKLKESSHSGVVLSVEEVEAGLKGLKVDQQVKNSTPFMAEHLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 KAKVDLKPLLSSLSANKEKLKESSHSGVVLSVEEVEAGLKGLKVDQQVKNSTPFMAEHLE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 ETLSAVTNNRQLKKDGDMTAFNKLVSTMKRNLESHLMSPAEIPGQPVPKNILQELLGQPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ETLSAVTNNRQLKKDGDMTAFNKLVSTMKRNLESHLMSPAEIPGQPVPKNILQELLGQPV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 QRPASSNLLSGLMGSLEPTTSLLGQRAPSPPLSQVFQTRAASADYLRPRIPSPIGFTPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QRPASSNLLSGLMGSLEPTTSLLGQRAPSPPLSQVFQTRAASADYLRPRIPSPIGFTPGP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 QQLLGDPFQGMRKPMSPITAQQMSQLELQQAALEGLALPHDLAVQAANFYQPGFGKPQVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QQLLGDPFQGMRKPMSPITAQQMSQLELQQAALEGLALPHDLAVQAANFYQPGFGKPQVD
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 RTRDGFRNRQQRVTKSPAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RTRDGFRNRQQRVTKSPAPVHRGNSSSPAPAASITSMLSPSFTPTSVIRKMYESKEKSKE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 EPASGKAALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 EPASGKAALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKLSALQRSSCSTPLSQA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE5 NRYTKEQDYRPKATGRKTPTLASPVPTTPFLRPVHQVPLVPHVPMVRPAHQLHPGLVQRM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 NRYTKEQDYRPKATGRKTPTLASPVPTTPFLRPVHQVPLVPHVPMVRPAHQLHPGLVQRM
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE5 LAQGVHPQHLPSLLQTGVLPPGMDLSHLQGISGPILGQPFYPLPAASHPLLNPRPGTPLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LAQGVHPQHLPSLLQTGVLPPGMDLSHLQGISGPILGQPFYPLPAASHPLLNPRPGTPLH
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE5 LAMVQQQLQRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLPHMHSQLEHRPSQRSSSPVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LAMVQQQLQRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLPHMHSQLEHRPSQRSSSPVG
730 740 750 760 770 780
790 800 810
pF1KE5 LAKWFGSDVLQQPLPSMPAKVISVDELEYRQ
:::::::::::::::::::::::::::::::
CCDS54 LAKWFGSDVLQQPLPSMPAKVISVDELEYRQ
790 800 810
>>CCDS13898.1 EIF4ENIF1 gene_id:56478|Hs108|chr22 (985 aa)
initn: 4613 init1: 2481 opt: 3220 Z-score: 2113.9 bits: 402.3 E(32554): 2e-111
Smith-Waterman score: 4665; 91.6% identity (93.5% similar) in 796 aa overlap (39-811:196-985)
10 20 30 40 50 60
pF1KE5 TESGDAFLDLKKPPASKCPHRYTKEELLDIKELPHSKQRPSCLSEKYDSDGVWDPE-KWH
.:. ::. ..:. .:. . : .:
CCDS13 FEKDHRLSDKDLRDLRDRDRERDFKDKRFRREFGDSKR---VFGERRRNDSYTEEEPEWF
170 180 190 200 210 220
70 80 90 100 110
pF1KE5 ASLYPASGRSSPVESL---KKELDTD---RPSLVRRIV----GIVECNGGVAEEDEVEVI
: :.: .: .: : :. : : :: . ::::::::::::::::::
CCDS13 -SAGPTS-QSETIELTGFDDKILEEDHKGRKRTRRRTASVKEGIVECNGGVAEEDEVEVI
230 240 250 260 270 280
120 130 140 150 160 170
pF1KE5 LAQEPAADQEVPRDAVLPEQSPGDFDFNEFFNLDKVPCLASMIEDVLGEGSVSASRFSRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LAQEPAADQEVPRDAVLPEQSPGDFDFNEFFNLDKVPCLASMIEDVLGEGSVSASRFSRW
290 300 310 320 330 340
180 190 200 210 220 230
pF1KE5 FSNPSRSGSRSSSLGSTPHEELERLAGLEQAILSPGQNSGNYFAPIPLEDHAENKVDILE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 FSNPSRSGSRSSSLGSTPHEELERLAGLEQAILSPGQNSGNYFAPIPLEDHAENKVDILE
350 360 370 380 390 400
240 250 260 270 280 290
pF1KE5 MLQKAKVDLKPLLSSLSANKEKLKESSHSGVVLSVEEVEAGLKGLKVDQQVKNSTPFMAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MLQKAKVDLKPLLSSLSANKEKLKESSHSGVVLSVEEVEAGLKGLKVDQQVKNSTPFMAE
410 420 430 440 450 460
300 310 320 330 340
pF1KE5 HLEETLSAVTNNRQLKKDGDMTAFNKLVSTMK------------RNLESHLMSPAEIPGQ
:::::::::::::::::::::::::::::::: ::::::::::::::::
CCDS13 HLEETLSAVTNNRQLKKDGDMTAFNKLVSTMKASGTLPSQPKVSRNLESHLMSPAEIPGQ
470 480 490 500 510 520
350 360 370 380 390 400
pF1KE5 PVPKNILQELLGQPVQRPASSNLLSGLMGSLEPTTSLLGQRAPSPPLSQVFQTRAASADY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PVPKNILQELLGQPVQRPASSNLLSGLMGSLEPTTSLLGQRAPSPPLSQVFQTRAASADY
530 540 550 560 570 580
410 420 430 440 450 460
pF1KE5 LRPRIPSPIGFTPGPQQLLGDPFQGMRKPMSPITAQQMSQLELQQAALEGLALPHDLAVQ
:::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
CCDS13 LRPRIPSPIGFTPGPQQLLGDPFQGMRKPMSPITAQ-MSQLELQQAALEGLALPHDLAVQ
590 600 610 620 630
470 480 490 500 510 520
pF1KE5 AANFYQPGFGKPQVDRTRDGFRNRQQRVTKSPAPVHRGNSSSPAPAASITSMLSPSFTPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 AANFYQPGFGKPQVDRTRDGFRNRQQRVTKSPAPVHRGNSSSPAPAASITSMLSPSFTPT
640 650 660 670 680 690
530 540 550 560 570 580
pF1KE5 SVIRKMYESKEKSKEEPASGKAALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SVIRKMYESKEKSKEEPASGKAALGDSKEDTQKASEENLLSSSSVPSADRDSSPTTNSKL
700 710 720 730 740 750
590 600 610 620 630 640
pF1KE5 SALQRSSCSTPLSQANRYTKEQDYRPKATGRKTPTLASPVPTTPFLRPVHQVPLVPHVPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SALQRSSCSTPLSQANRYTKEQDYRPKATGRKTPTLASPVPTTPFLRPVHQVPLVPHVPM
760 770 780 790 800 810
650 660 670 680 690 700
pF1KE5 VRPAHQLHPGLVQRMLAQGVHPQHLPSLLQTGVLPPGMDLSHLQGISGPILGQPFYPLPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 VRPAHQLHPGLVQRMLAQGVHPQHLPSLLQTGVLPPGMDLSHLQGISGPILGQPFYPLPA
820 830 840 850 860 870
710 720 730 740 750 760
pF1KE5 ASHPLLNPRPGTPLHLAMVQQQLQRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLPHMHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ASHPLLNPRPGTPLHLAMVQQQLQRSVLHPPGSGSHAAAVSVQTTPQNVPSRSGLPHMHS
880 890 900 910 920 930
770 780 790 800 810
pF1KE5 QLEHRPSQRSSSPVGLAKWFGSDVLQQPLPSMPAKVISVDELEYRQ
::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QLEHRPSQRSSSPVGLAKWFGSDVLQQPLPSMPAKVISVDELEYRQ
940 950 960 970 980
>--
initn: 708 init1: 683 opt: 697 Z-score: 468.0 bits: 97.8 E(32554): 9.5e-20
Smith-Waterman score: 697; 86.0% identity (92.6% similar) in 121 aa overlap (1-121:1-117)
10 20 30 40 50 60
pF1KE5 MDRRSMGETESGDAFLDLKKPPASKCPHRYTKEELLDIKELPHSKQRPSCLSEKYDSDGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MDRRSMGETESGDAFLDLKKPPASKCPHRYTKEELLDIKELPHSKQRPSCLSEKYDSDGV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 WDPEKWHASLYPASGRSSPVESLKKELDTDRPSLVRRIVGIVECNGGVAEEDEVEVILAQ
::::::::::::::::::::::::::::::::::::::: : ..::...:.:.
CCDS13 WDPEKWHASLYPASGRSSPVESLKKELDTDRPSLVRRIVDPRE----RVKEDDLDVVLSP
70 80 90 100 110
130 140 150 160 170 180
pF1KE5 EPAADQEVPRDAVLPEQSPGDFDFNEFFNLDKVPCLASMIEDVLGEGSVSASRFSRWFSN
.
CCDS13 QRRSFGGGCHVTAAVSSRRSGSPLEKDSDGLRLLGGRRIGSGRIISARTFEKDHRLSDKD
120 130 140 150 160 170
811 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 06:25:15 2016 done: Tue Nov 8 06:25:16 2016
Total Scan time: 3.890 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]