FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE5717, 657 aa
  1>>>pF1KE5717 657 - 657 aa - 657 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 15.2150+/-0.00144; mu= -23.4877+/- 0.086
 mean_var=663.0885+/-138.256, 0's: 0 Z-trim(114.9): 55  B-trim: 159 in 1/50
 Lambda= 0.049807
 statistics sampled from 15433 (15478) to 15433 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.756), E-opt: 0.2 (0.475), width:  16
 Scan time:  4.250

The best scores are:                                      opt bits E(32554)
CCDS13504.1 OGFR gene_id:11054|Hs108|chr20         ( 677) 4413 332.3 1.3e-90
CCDS34482.1 OGFRL1 gene_id:79627|Hs108|chr6        ( 451)  896 79.5 1.2e-14


>>CCDS13504.1 OGFR gene_id:11054|Hs108|chr20              (677 aa)
 initn: 4413 init1: 4413 opt: 4413  Z-score: 1740.2  bits: 332.3 E(32554): 1.3e-90
Smith-Waterman score: 4560; 97.0% identity (97.0% similar) in 677 aa overlap (1-657:1-677)

               10        20        30        40        50        60
pF1KE5 MDDPDCDSTWEEDEEDAEDAEDEDCEDGEAAGARDADAGDEDEESEEPRAARPSSFQSRM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MDDPDCDSTWEEDEEDAEDAEDEDCEDGEAAGARDADAGDEDEESEEPRAARPSSFQSRM
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 TGSRNWRATRDMCRYRHNYPDLVERDCNGDTPNLSFYRNEIRFLPNGCFIEDILQNWTDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TGSRNWRATRDMCRYRHNYPDLVERDCNGDTPNLSFYRNEIRFLPNGCFIEDILQNWTDN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 YDLLEDNHSYIQWLFPLREPGVNWHAKPLTLREVEVFKSSQEIQERLVRAYELMLGFYGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 YDLLEDNHSYIQWLFPLREPGVNWHAKPLTLREVEVFKSSQEIQERLVRAYELMLGFYGI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 RLEDRGTGTVGRAQNYQKRFQNLNWRSHNNLRITRILKSLGELGLEHFQAPLVRFFLEET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 RLEDRGTGTVGRAQNYQKRFQNLNWRSHNNLRITRILKSLGELGLEHFQAPLVRFFLEET
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE5 LVRRELPGVRQSALDYFMFAVRCRHQRRQLVHFAWEHFRPRCKFVWGPQDKLRRFKPSSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LVRRELPGVRQSALDYFMFAVRCRHQRRQLVHFAWEHFRPRCKFVWGPQDKLRRFKPSSL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE5 PHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPEHSKGGGRVDEGPQPRSVEPQDAGPLER
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE5 SQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SQGDEAGGHGEDRPEPLSPKESKKRKLELSRREQPPTEPGPQSASEVEKIALNLEGCALS
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE5 QGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QGSLRTGTQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLA
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE5 LAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSE
              490       500       510       520       530       540

              550       560                           570       580
pF1KE5 TPGPRPAGPAGDEPAESPSETPGP--------------------SPAGPTRDEPAESPSE
       ::::::::::::::::::::::::                    ::::::::::::::::
CCDS13 TPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSE
              550       560       570       580       590       600

              590       600       610       620       630       640
pF1KE5 TPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 TPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEA
              610       620       630       640       650       660

              650       
pF1KE5 AELQDAEVESSAKSGKP
       :::::::::::::::::
CCDS13 AELQDAEVESSAKSGKP
              670       

>>CCDS34482.1 OGFRL1 gene_id:79627|Hs108|chr6             (451 aa)
 initn: 880 init1: 421 opt: 896  Z-score: 376.8  bits: 79.5 E(32554): 1.2e-14
Smith-Waterman score: 929; 38.4% identity (67.0% similar) in 424 aa overlap (5-409:18-417)

                            10                    20         30    
pF1KE5              MDDPDCDSTWEEDEE------------DAEDAEDED-CEDGEAAGAR
                        ::::::. : :            ..   :.:.  .  : ::.:
CCDS34 MGNLLGGVSFREPTTVEDCDSTWQTDSEPEPEEPGPGGGSEGPGQESEQPAQPPEQAGGR
               10        20        30        40        50        60

           40        50         60        70        80        90   
pF1KE5 DADAGDEDEESEEPRAARPS-SFQSRMTGSRNWRATRDMCRYRHNYPDLVERDCNGDTPN
        . .   ::..:   : . . : ..    .:.. :.::. .:::.::.. .   ..:  :
CCDS34 PGASPAPDEDAEAAGAEQGGDSTEATAKPKRSFYAARDLYKYRHQYPNFKDIRYQNDLSN
               70        80        90       100       110       120

           100       110       120       130       140       150   
pF1KE5 LSFYRNEIRFLPNGCFIEDILQNWTDNYDLLEDNHSYIQWLFPLREPGVNWHAKPLTLRE
       : ::.:.: : :.: .::..:..:  .:. :: ::.:::::::::: :.:..:: ::  :
CCDS34 LRFYKNKIPFKPDGVYIEEVLSKWKGDYEKLEHNHTYIQWLFPLREQGLNFYAKELTTYE
              130       140       150       160       170       180

           160       170       180       190       200       210   
pF1KE5 VEVFKSSQEIQERLVRAYELMLGFYGIRLEDRGTGTVGRAQNYQKRFQNLNWRSHNNLRI
       .: ::...:  .:.. ::..:: :.::.: :. ::.:.:: :.:.:::.::  .:: :::
CCDS34 IEEFKKTKEAIRRFLLAYKMMLEFFGIKLTDK-TGNVARAVNWQERFQHLNESQHNYLRI
              190       200       210        220       230         

           220       230       240       250       260       270   
pF1KE5 TRILKSLGELGLEHFQAPLVRFFLEETLVRRELPGVRQSALDYFMFAVRCRHQRRQLVHF
       ::::::::::: : :..:::.:.:.:.::.  .:...::::.::....: :..::.:..:
CCDS34 TRILKSLGELGYESFKSPLVKFILHEALVENTIPNIKQSALEYFVYTIRDRRERRKLLRF
     240       250       260       270       280       290         

           280       290       300       310       320       330   
pF1KE5 AWEHFRPRCKFVWGPQDKLRRFKPSSLPHPLEGSRKVEEEGSPGDPDHEASTQGRTCGPE
       : .:. :  .:.:::  : .           ::: :... .::   .:...:. .  . .
CCDS34 AQKHYTPSENFIWGPPRKEQS----------EGS-KAQKMSSPLASSHNSQTSMHKKAKD
     300       310       320                  330       340        

           340          350       360       370       380          
pF1KE5 HSKGGGRV---DEGPQPRSVEPQDAGPLERSQGDEAGGHGEDRPEPLSPKESKK-RKLEL
        ..... :   ..  . ..: :..  :.:..          ::: :   .:. : :. : 
CCDS34 SKNSSSAVHLNSKTAEDKKVAPKE--PVEET----------DRPSPEPSNEAAKPRNTEK
      350       360       370                   380       390      

      390       400       410       420       430       440        
pF1KE5 -SRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLG
        :  :.  ..:    .. .::                                       
CCDS34 DSNAENMNSQPEKTVTTPTEKKESVSPENNEEGGNDNQDNENPGNTNCHDVVLVQ     
        400       410       420       430       440       450      




657 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 06:01:30 2016 done: Tue Nov  8 06:01:30 2016
 Total Scan time:  4.250 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]