Result of FASTA (omim) for
pFN21AE5715
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5715, 631 aa
1>>>pF1KE5715 631 - 631 aa - 631 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.6507+/-0.000635; mu= 6.9556+/- 0.040
mean_var=347.6649+/-78.654, 0's: 0 Z-trim(115.5): 214 B-trim: 3000 in 2/49
Lambda= 0.068785
statistics sampled from 25590 (25938) to 25590 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.644), E-opt: 0.2 (0.304), width: 16
Scan time: 8.320
The best scores are: opt bits E(85289)
NP_112241 (OMIM: 604680) polyadenylate-binding pro ( 631) 4146 426.4 1.5e-118
XP_005250918 (OMIM: 604679) PREDICTED: polyadenyla ( 636) 3818 393.8 9.6e-109
NP_002559 (OMIM: 604679) polyadenylate-binding pro ( 636) 3818 393.8 9.6e-109
NP_001129126 (OMIM: 603407) polyadenylate-binding ( 631) 2941 306.8 1.5e-82
NP_003810 (OMIM: 603407) polyadenylate-binding pro ( 644) 2403 253.4 1.8e-66
NP_001129125 (OMIM: 603407) polyadenylate-binding ( 660) 2398 252.9 2.6e-66
NP_543022 (OMIM: 300407) polyadenylate-binding pro ( 382) 1509 164.4 6.7e-40
NP_003243 (OMIM: 603413) nucleolysin TIAR isoform ( 375) 441 58.4 5.4e-08
XP_011531379 (OMIM: 603518,604454) PREDICTED: nucl ( 385) 413 55.6 3.7e-07
NP_071505 (OMIM: 603518,604454) nucleolysin TIA-1 ( 386) 413 55.6 3.7e-07
XP_005264584 (OMIM: 603518,604454) PREDICTED: nucl ( 374) 410 55.3 4.5e-07
NP_071320 (OMIM: 603518,604454) nucleolysin TIA-1 ( 375) 410 55.3 4.5e-07
NP_001310898 (OMIM: 603413) nucleolysin TIAR isofo ( 336) 396 53.9 1.1e-06
NP_001310899 (OMIM: 603413) nucleolysin TIAR isofo ( 353) 393 53.6 1.4e-06
NP_001029097 (OMIM: 603413) nucleolysin TIAR isofo ( 392) 393 53.6 1.5e-06
NP_005841 (OMIM: 154400,605593) splicing factor 3B ( 424) 381 52.5 3.6e-06
XP_016860278 (OMIM: 603518,604454) PREDICTED: nucl ( 349) 370 51.3 6.8e-06
NP_001310897 (OMIM: 603413) nucleolysin TIAR isofo ( 360) 368 51.1 7.9e-06
XP_016860279 (OMIM: 603518,604454) PREDICTED: nucl ( 338) 367 51.0 8.2e-06
XP_005264585 (OMIM: 603518,604454) PREDICTED: nucl ( 321) 315 45.8 0.00028
XP_016860280 (OMIM: 603518,604454) PREDICTED: nucl ( 310) 312 45.5 0.00034
XP_016872095 (OMIM: 603413) PREDICTED: nucleolysin ( 252) 304 44.6 0.00052
NP_001310894 (OMIM: 603413) nucleolysin TIAR isofo ( 252) 304 44.6 0.00052
NP_001310893 (OMIM: 603413) nucleolysin TIAR isofo ( 252) 304 44.6 0.00052
NP_001310896 (OMIM: 603413) nucleolysin TIAR isofo ( 252) 304 44.6 0.00052
XP_005264588 (OMIM: 603518,604454) PREDICTED: nucl ( 285) 301 44.3 0.00069
XP_016860284 (OMIM: 603518,604454) PREDICTED: nucl ( 285) 301 44.3 0.00069
NP_005372 (OMIM: 164035) nucleolin [Homo sapiens] ( 710) 281 42.9 0.0047
XP_011516078 (OMIM: 601673) PREDICTED: ELAV-like p ( 376) 270 41.4 0.0069
NP_001164668 (OMIM: 601673) ELAV-like protein 2 is ( 346) 266 41.0 0.0086
XP_016869914 (OMIM: 601673) PREDICTED: ELAV-like p ( 346) 266 41.0 0.0086
NP_001164666 (OMIM: 601673) ELAV-like protein 2 is ( 346) 266 41.0 0.0086
XP_016869913 (OMIM: 601673) PREDICTED: ELAV-like p ( 346) 266 41.0 0.0086
XP_016869908 (OMIM: 601673) PREDICTED: ELAV-like p ( 359) 266 41.0 0.0088
XP_016869909 (OMIM: 601673) PREDICTED: ELAV-like p ( 359) 266 41.0 0.0088
XP_016869910 (OMIM: 601673) PREDICTED: ELAV-like p ( 359) 266 41.0 0.0088
XP_016869911 (OMIM: 601673) PREDICTED: ELAV-like p ( 359) 266 41.0 0.0088
NP_004423 (OMIM: 601673) ELAV-like protein 2 isofo ( 359) 266 41.0 0.0088
XP_016869912 (OMIM: 601673) PREDICTED: ELAV-like p ( 359) 266 41.0 0.0088
XP_011516086 (OMIM: 601673) PREDICTED: ELAV-like p ( 360) 266 41.0 0.0088
XP_011516088 (OMIM: 601673) PREDICTED: ELAV-like p ( 360) 266 41.0 0.0088
XP_011516087 (OMIM: 601673) PREDICTED: ELAV-like p ( 360) 266 41.0 0.0088
XP_006716799 (OMIM: 601673) PREDICTED: ELAV-like p ( 360) 266 41.0 0.0088
XP_016869907 (OMIM: 601673) PREDICTED: ELAV-like p ( 360) 266 41.0 0.0088
XP_005251451 (OMIM: 601673) PREDICTED: ELAV-like p ( 360) 266 41.0 0.0088
XP_005251450 (OMIM: 601673) PREDICTED: ELAV-like p ( 360) 266 41.0 0.0088
XP_005251452 (OMIM: 601673) PREDICTED: ELAV-like p ( 360) 266 41.0 0.0088
XP_016869906 (OMIM: 601673) PREDICTED: ELAV-like p ( 373) 266 41.0 0.009
XP_011516085 (OMIM: 601673) PREDICTED: ELAV-like p ( 374) 266 41.0 0.009
XP_016869905 (OMIM: 601673) PREDICTED: ELAV-like p ( 375) 266 41.0 0.009
>>NP_112241 (OMIM: 604680) polyadenylate-binding protein (631 aa)
initn: 4146 init1: 4146 opt: 4146 Z-score: 2249.2 bits: 426.4 E(85289): 1.5e-118
Smith-Waterman score: 4146; 100.0% identity (100.0% similar) in 631 aa overlap (1-631:1-631)
10 20 30 40 50 60
pF1KE5 MNPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 MNPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 HTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 HTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 AFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKERE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 AFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKERE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 AELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 AELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 LDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 LDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 KPLYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQNHAAYYPPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 KPLYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQNHAAYYPPS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 QIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRPASSQVPRVMSTQRVANTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 QIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRPASSQVPRVMSTQRVANTS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 TQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQHRNAQPQVTMQQLAVHVQGQETL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 TQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQHRNAQPQVTMQQLAVHVQGQETL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 TASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 TASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRS
550 560 570 580 590 600
610 620 630
pF1KE5 KVDEAVAVLQAHQAKEATQKAVNSATGVPTV
:::::::::::::::::::::::::::::::
NP_112 KVDEAVAVLQAHQAKEATQKAVNSATGVPTV
610 620 630
>>XP_005250918 (OMIM: 604679) PREDICTED: polyadenylate-b (636 aa)
initn: 3248 init1: 2425 opt: 3818 Z-score: 2073.3 bits: 393.8 E(85289): 9.6e-109
Smith-Waterman score: 3818; 92.0% identity (95.9% similar) in 637 aa overlap (1-631:1-636)
10 20 30 40 50 60
pF1KE5 MNPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQ
::::.:::: :::::::::::::::::::::::::::::::.:::.:: : .:::::::
XP_005 MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 HTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVS
. :::.:::::::::::::::::::::::::::::::::::.:::::::.::::::: :
XP_005 QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 AFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKERE
::::::::.::::::::::::::::::.:::::::.:::::::: ::::::.::::::::
XP_005 AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 AELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
:::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKN
:::::::::::::::::::::::::::::::::::::: ::::::::::::: :::::::
XP_005 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 LDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
310 320 330 340 350 360
370 380 390 400 410
pF1KE5 KPLYVALAQRKEERQAYLTNEYMQRMASVRAVPN------QRAPPSGYFMTAVPQTQNHA
::::::::::::::::.:::.::::::::::::: : ::::::::.:.:::::.:
XP_005 KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRA
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE5 AYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRPASSQVPRVMSTQ
:::::::::.::::::::::::::::::: :.::::.::: :::::::::::::::::::
XP_005 AYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQ
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE5 RVANTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQHRNAQPQVTMQQLAVHV
:::::::::.::::::::::: ::::::::.::::::::::::: :::::::::: ::::
XP_005 RVANTSTQTMGPRPAAAAAAA-TPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHV
490 500 510 520 530
540 550 560 570 580 590
pF1KE5 QGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLES
:::: :::: :::::::.:::::::::::::::::::::::::::::::::::::.::::
XP_005 QGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLES
540 550 560 570 580 590
600 610 620 630
pF1KE5 PESLRSKVDEAVAVLQAHQAKEATQKAVNSATGVPTV
:::::::::::::::::::::::.:::::::::::::
XP_005 PESLRSKVDEAVAVLQAHQAKEAAQKAVNSATGVPTV
600 610 620 630
>>NP_002559 (OMIM: 604679) polyadenylate-binding protein (636 aa)
initn: 3248 init1: 2425 opt: 3818 Z-score: 2073.3 bits: 393.8 E(85289): 9.6e-109
Smith-Waterman score: 3818; 92.0% identity (95.9% similar) in 637 aa overlap (1-631:1-636)
10 20 30 40 50 60
pF1KE5 MNPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQ
::::.:::: :::::::::::::::::::::::::::::::.:::.:: : .:::::::
NP_002 MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 HTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVS
. :::.:::::::::::::::::::::::::::::::::::.:::::::.::::::: :
NP_002 QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 AFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKERE
::::::::.::::::::::::::::::.:::::::.:::::::: ::::::.::::::::
NP_002 AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 AELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
:::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 AELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKN
:::::::::::::::::::::::::::::::::::::: ::::::::::::: :::::::
NP_002 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 LDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
NP_002 LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
310 320 330 340 350 360
370 380 390 400 410
pF1KE5 KPLYVALAQRKEERQAYLTNEYMQRMASVRAVPN------QRAPPSGYFMTAVPQTQNHA
::::::::::::::::.:::.::::::::::::: : ::::::::.:.:::::.:
NP_002 KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRA
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE5 AYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRPASSQVPRVMSTQ
:::::::::.::::::::::::::::::: :.::::.::: :::::::::::::::::::
NP_002 AYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQ
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE5 RVANTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQHRNAQPQVTMQQLAVHV
:::::::::.::::::::::: ::::::::.::::::::::::: :::::::::: ::::
NP_002 RVANTSTQTMGPRPAAAAAAA-TPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHV
490 500 510 520 530
540 550 560 570 580 590
pF1KE5 QGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLES
:::: :::: :::::::.:::::::::::::::::::::::::::::::::::::.::::
NP_002 QGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLES
540 550 560 570 580 590
600 610 620 630
pF1KE5 PESLRSKVDEAVAVLQAHQAKEATQKAVNSATGVPTV
:::::::::::::::::::::::.:::::::::::::
NP_002 PESLRSKVDEAVAVLQAHQAKEAAQKAVNSATGVPTV
600 610 620 630
>>NP_001129126 (OMIM: 603407) polyadenylate-binding prot (631 aa)
initn: 2768 init1: 2159 opt: 2941 Z-score: 1602.9 bits: 306.8 E(85289): 1.5e-82
Smith-Waterman score: 2962; 73.2% identity (87.4% similar) in 641 aa overlap (1-626:1-630)
10 20 30 40 50 60
pF1KE5 MNPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQ
:: .. ::: ::::::::: ::::::::::::::::.::::.:::.:: : .:::::::
NP_001 MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 HTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVS
. :::.::::::::::::::.::::::::::::::::::.:.:::::::.::::::: :
NP_001 QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 AFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKERE
::::::::.:::::::::::.::::::.:::..::.:::::::: ::::::.::::::::
NP_001 AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 AELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
:::::.:::: :::::::::..::: ::.::..:: .:::::: : .::::::::::.:.
NP_001 AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKN
::::.:::.::::::..:: :.:::::::::::.:::: :::.::.::.::: ::::.::
NP_001 HEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 LDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
::: ::::.::: :::::.:::::::.: :::::::::::::::::::::::::::::..
NP_001 LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
310 320 330 340 350 360
370 380 390 400 410
pF1KE5 KPLYVALAQRKEERQAYLTNEYMQRMASVRAVP-----NQRAPPSG-YFMTAVPQTQNHA
::::::::::::::.:.:::.::::.:..::.: :: : .: ::. ::::.:..
NP_001 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
370 380 390 400 410 420
420 430 440 450 460
pF1KE5 AYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRP-----ASSQVPR
:: :.:.:..::.::: ::.::. ::. ::::: ..:: . . : :: .:
NP_001 PYYTPNQLAQMRPNPRWQ-QGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPT
430 440 450 460 470
470 480 490 500 510 520
pF1KE5 VMSTQRVA-NTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQHRNAQPQVTMQ
.::::. :..:...:: ::.:::.: :.: ::::..::.: : :: .
NP_001 --TTQRVGVPTAVQNLAPR---AAVAAAAP--RAVAPYKYASSVRSP--HPAIQP-LQAP
480 490 500 510 520
530 540 550 560 570 580
pF1KE5 QLAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL
: :::::::: :::: ::.::::.::::::::::::::.:: .:::::::::::::::::
NP_001 QPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSEL
530 540 550 560 570 580
590 600 610 620 630
pF1KE5 LYMLESPESLRSKVDEAVAVLQAHQAK-EATQK--AVNSATGVPTV
:.::::::::::::::::::::::.:: ::.:: :: .::
NP_001 LHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVAAATS
590 600 610 620 630
>>NP_003810 (OMIM: 603407) polyadenylate-binding protein (644 aa)
initn: 2768 init1: 2159 opt: 2403 Z-score: 1314.3 bits: 253.4 E(85289): 1.8e-66
Smith-Waterman score: 2937; 71.7% identity (86.0% similar) in 650 aa overlap (1-626:1-643)
10 20 30 40 50 60
pF1KE5 MNPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQ
:: .. ::: ::::::::: ::::::::::::::::.::::.:::.:: : .:::::::
NP_003 MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 HTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVS
. :::.::::::::::::::.::::::::::::::::::.:.:::::::.::::::: :
NP_003 QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 AFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKERE
::::::::.:::::::::::.::::::.:::..::.:::::::: ::::::.::::::::
NP_003 AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 AELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
:::::.:::: :::::::::..::: ::.::..:: .:::::: : .::::::::::.:.
NP_003 AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKN
::::.:::.::::::..:: :.:::::::::::.:::: :::.::.::.::: ::::.::
NP_003 HEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 LDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
::: ::::.::: :::::.:::::::.: :::::::::::::::::::::::::::::..
NP_003 LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
310 320 330 340 350 360
370 380 390 400 410
pF1KE5 KPLYVALAQRKEERQAYLTNEYMQRMASVRAVP-----NQRAPPSG-YFMTAVPQTQNHA
::::::::::::::.:.:::.::::.:..::.: :: : .: ::. ::::.:..
NP_003 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE5 AYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRPASSQVPRVMS--
:: :.:.:..::.::: ::.::. ::. ::::: ..:: . . :..:. : ..
NP_003 PYYTPNQLAQMRPNPRWQ-QGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGSECPDRLAMD
430 440 450 460 470
480 490 500 510
pF1KE5 ------TQRVANTSTQTVGPRPAA-------AAAAAATPAVRTVPRYKYAAGVRNPQQHR
.:. . : :. : :.: ::.:::.: :.: ::::..::.: :
NP_003 FGGAGAAQQGLTDSCQS-GGVPTAVQNLAPRAAVAAAAP--RAVAPYKYASSVRSP--HP
480 490 500 510 520 530
520 530 540 550 560 570
pF1KE5 NAQPQVTMQQLAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGM
:: . : :::::::: :::: ::.::::.::::::::::::::.:: .::::::::
NP_003 AIQP-LQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGM
540 550 560 570 580 590
580 590 600 610 620 630
pF1KE5 LLEIDNSELLYMLESPESLRSKVDEAVAVLQAHQAK-EATQK--AVNSATGVPTV
::::::::::.::::::::::::::::::::::.:: ::.:: :: .::
NP_003 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVAAATS
600 610 620 630 640
>>NP_001129125 (OMIM: 603407) polyadenylate-binding prot (660 aa)
initn: 2768 init1: 2159 opt: 2398 Z-score: 1311.5 bits: 252.9 E(85289): 2.6e-66
Smith-Waterman score: 2907; 70.3% identity (83.8% similar) in 667 aa overlap (1-626:1-659)
10 20 30 40 50 60
pF1KE5 MNPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQ
:: .. ::: ::::::::: ::::::::::::::::.::::.:::.:: : .:::::::
NP_001 MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 HTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVS
. :::.::::::::::::::.::::::::::::::::::.:.:::::::.::::::: :
NP_001 QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 AFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKERE
::::::::.:::::::::::.::::::.:::..::.:::::::: ::::::.::::::::
NP_001 AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 AELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
:::::.:::: :::::::::..::: ::.::..:: .:::::: : .::::::::::.:.
NP_001 AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKN
::::.:::.::::::..:: :.:::::::::::.:::: :::.::.::.::: ::::.::
NP_001 HEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 LDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
::: ::::.::: :::::.:::::::.: :::::::::::::::::::::::::::::..
NP_001 LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
310 320 330 340 350 360
370 380 390 400 410
pF1KE5 KPLYVALAQRKEERQAYLTNEYMQRMASVRAVP-----NQRAPPSG-YFMTAVPQTQNHA
::::::::::::::.:.:::.::::.:..::.: :: : .: ::. ::::.:..
NP_001 KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
370 380 390 400 410 420
420 430 440 450 460
pF1KE5 AYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRP-----ASSQVPR
:: :.:.:..::.::: ::.::. ::. ::::: ..:: . . : :: .:
NP_001 PYYTPNQLAQMRPNPRWQ-QGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPT
430 440 450 460 470
470 480 490 500
pF1KE5 VMSTQRVAN--------------------TSTQTVGPRPAA-------AAAAAATPAVRT
.::::.. :.. : :.: ::.:::.: :.
NP_001 --TTQRVGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVQNLAPRAAVAAAAP--RA
480 490 500 510 520 530
510 520 530 540 550 560
pF1KE5 VPRYKYAAGVRNPQQHRNAQPQVTMQQLAVHVQGQETLTASRLASAPPQKQKQMLGERLF
: ::::..::.: : :: . : :::::::: :::: ::.::::.::::::::::
NP_001 VAPYKYASSVRSP--HPAIQP-LQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLF
540 550 560 570 580 590
570 580 590 600 610 620
pF1KE5 PLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRSKVDEAVAVLQAHQAK-EATQK-
::::.:: .::::::::::::::::::.::::::::::::::::::::::.:: ::.::
NP_001 PLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKV
600 610 620 630 640 650
630
pF1KE5 -AVNSATGVPTV
:: .::
NP_001 GAVAAATS
660
>>NP_543022 (OMIM: 300407) polyadenylate-binding protein (382 aa)
initn: 1681 init1: 764 opt: 1509 Z-score: 837.3 bits: 164.4 E(85289): 6.7e-40
Smith-Waterman score: 1509; 61.1% identity (82.0% similar) in 373 aa overlap (2-371:7-379)
10 20 30 40 50
pF1KE5 MNPS--TPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSN
::. .: :.:::::: ::::: :::.:: ::::. ::::: .: . .
NP_543 MGSGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 YAYVNFQHTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNK
:.::::. ::: ::.:::::.:.::: :.:::: : ::::::::::.:::::::.:.
NP_543 YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE5 ALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQF
::. :::::::::.::::.::::::..:::.. ::.::: .:::. ::.:.:.::.:
NP_543 ALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRF
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE5 KSRKEREAELGARAKE-FPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKG
: .:: ::. .: . : ::..::.:.:.:::.::.:: ..::. ::::. : ::::::
NP_543 KFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKG
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE5 FGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQ
:::: .: :: ::::: ...:: ..:: .::::::::.:: .::.: ::... . .:
NP_543 FGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPP
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE5 VVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTE
: .:.::::. :.::.:.. :: ::.:. :::::: :..:::: ::::: ::::::: :
NP_543 GVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE5 MNGRIVATKPLYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQN
::::::..:::.:.:.: .
NP_543 MNGRIVGSKPLHVTLGQARRRC
370 380
>>NP_003243 (OMIM: 603413) nucleolysin TIAR isoform 1 [H (375 aa)
initn: 357 init1: 148 opt: 441 Z-score: 264.6 bits: 58.4 E(85289): 5.4e-08
Smith-Waterman score: 441; 27.2% identity (60.7% similar) in 364 aa overlap (101-450:11-361)
80 90 100 110 120 130
pF1KE5 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNV
..: ::...... . . : .: ::..
NP_003 MMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKM
10 20 30 40
140 150 160 170 180 190
pF1KE5 VCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEF
. ..... : ::.: :. : :. ::: . :..: :. . . .. . ...:
NP_003 ITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDT---SNHF
50 60 70 80 90
200 210 220 230 240
pF1KE5 PNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVD
.:.. ... .. : .:. :. :: ...:. : .:::::.::::: . ::..:.
NP_003 -HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIV
100 110 120 130 140 150
250 260 270 280 290 300
pF1KE5 EMNGKELNGKQIYVGRAQKK--VERQTELKRTFEQMK-QDRITRYQVVN--LYVKNLDDG
.:.:. :.:.:: .. : .: . ..:. . : .:.. .: ... . : .: .. .:
NP_003 HMGGQWLGGRQIRTNWATRKPPAPKSTQENNT-KQLRFEDVVNQSSPKNCTVYCGGIASG
160 170 180 190 200 210
310 320 330 340 350 360
pF1KE5 IDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLY
. :. .:..::::: : .:. : ::..:: ::. : :..:.. .:: . . .
NP_003 LTDQLMRQTFSPFGQIMEIRVFPE----KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK
220 230 240 250 260 270
370 380 390 400 410 420
pF1KE5 VALAQRKEE-RQAYLTNEYMQ--RMASVRAVPNQRAPPSGYFMTAVPQTQNHAAYYPP-S
.... . . . .: : . ..: . :.: : .:. :. ...: : .
NP_003 CYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQY----GQYMANGWQVPPYGVYGQPWN
280 290 300 310 320
430 440 450 460 470
pF1KE5 QIA---RLRPSPRWTAQ-GARPHPFQNKPSAIRPGAPRVPFSTMRPASSQVPRVMSTQRV
: . :: : . ::.: : : .: :
NP_003 QQGFGVDQSPSAAWMGGFGAQPPQGQAPPPVIPPPNQAGYGMASYQTQ
330 340 350 360 370
480 490 500 510 520 530
pF1KE5 ANTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQHRNAQPQVTMQQLAVHVQG
>>XP_011531379 (OMIM: 603518,604454) PREDICTED: nucleoly (385 aa)
initn: 367 init1: 150 opt: 413 Z-score: 249.4 bits: 55.6 E(85289): 3.7e-07
Smith-Waterman score: 422; 25.2% identity (56.0% similar) in 400 aa overlap (101-482:9-385)
80 90 100 110 120 130
pF1KE5 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNV
..: ::...... . . : .: .:..
XP_011 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKM
10 20 30
140 150 160 170 180
pF1KE5 VCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGA-----
. : :. : ::.:. :. : :. ::: . :..: :. . . .. . ..
XP_011 IMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVS
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE5 --RAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE
:... .:.. ... .. : .: :. :: ...:. : .:::::.::::: .
XP_011 TQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKW
100 110 120 130 140 150
250 260 270 280 290
pF1KE5 DAQKAVDEMNGKELNGKQIYVGRAQKKVER-QTELKRTFEQMKQDRITRYQV---VNLYV
::..:...:.:. :.:.:: .. : .: .. . . .:.. :... . ..:
XP_011 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC
160 170 180 190 200 210
300 310 320 330 340 350
pF1KE5 KNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIV
.. .:. .. .:..::::: : .:. . ::..:: :.: : :..:.. .:: .
XP_011 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD----KGYSFVRFNSHESAAHAIVSVNGTTI
220 230 240 250 260 270
360 370 380 390 400 410
pF1KE5 ATKPLYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQNHAAYYP
. . . : .: .. . :. : : . ..:. . :.:
XP_011 EGHVV-----------KCYWGKETLDMINPVQQNQIGYPQPYGQWGQWYGNAQQIGQYMP
280 290 300 310 320
420 430 440 450 460 470
pF1KE5 PS-QI-ARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRPASSQ----VPRVMS
. :. : . :. :: :.. :: : : ..: ..: .: :
XP_011 NGWQVPAYGMYGQAWNQQGFN----QTQSSAPWMG----PNYGVQPPQGQNGSMLPNQPS
330 340 350 360 370
480 490 500 510 520 530
pF1KE5 TQRVANTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQHRNAQPQVTMQQLAV
:::. ::
XP_011 GYRVAGYETQ
380
>>NP_071505 (OMIM: 603518,604454) nucleolysin TIA-1 isof (386 aa)
initn: 260 init1: 152 opt: 413 Z-score: 249.4 bits: 55.6 E(85289): 3.7e-07
Smith-Waterman score: 419; 25.4% identity (56.4% similar) in 401 aa overlap (101-482:9-386)
80 90 100 110 120 130
pF1KE5 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNV
..: ::...... . . : .: .:..
NP_071 MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKM
10 20 30
140 150 160 170 180
pF1KE5 VCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGA-----
. : :. : ::.:. :. : :. ::: . :..: :. . . .. . ..
NP_071 IMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVS
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE5 --RAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHE
:... .:.. ... .. : .: :. :: ...:. : .:::::.::::: .
NP_071 TQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKW
100 110 120 130 140 150
250 260 270 280 290
pF1KE5 DAQKAVDEMNGKELNGKQIYVGRAQKKVER-QTELKRTFEQMKQDRITRYQV---VNLYV
::..:...:.:. :.:.:: .. : .: .. . . .:.. :... . ..:
NP_071 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYC
160 170 180 190 200 210
300 310 320 330 340 350
pF1KE5 KNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIV
.. .:. .. .:..::::: : .:. . ::..:: :.: : :..:.. .:: .
NP_071 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD----KGYSFVRFNSHESAAHAIVSVNGTTI
220 230 240 250 260 270
360 370 380 390 400 410
pF1KE5 ATKPLYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAP-PSGYFMTAVPQTQNHAAYY
. . . : .: .. . :. . : : : . ..:. . :.
NP_071 EGHVV-----------KCYWGKETLDMINPVQQQNQIGYPQPYGQWGQWYGNAQQIGQYM
280 290 300 310 320
420 430 440 450 460 470
pF1KE5 PPS-QI-ARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRPASSQ----VPRVM
: . :. : . :. :: :.. :: : : ..: ..: .:
NP_071 PNGWQVPAYGMYGQAWNQQGFN----QTQSSAPWMG----PNYGVQPPQGQNGSMLPNQP
330 340 350 360 370
480 490 500 510 520 530
pF1KE5 STQRVANTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQHRNAQPQVTMQQLA
: :::. ::
NP_071 SGYRVAGYETQ
380
631 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 04:23:59 2016 done: Tue Nov 8 04:24:01 2016
Total Scan time: 8.320 Total Display time: 0.140
Function used was FASTA [36.3.4 Apr, 2011]