Result of FASTA (ccds) for
pFN21AE5707
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5707, 654 aa
1>>>pF1KE5707 654 - 654 aa - 654 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.6102+/-0.000909; mu= 13.2623+/- 0.055
mean_var=88.0743+/-17.750, 0's: 0 Z-trim(107.9): 21 B-trim: 43 in 1/50
Lambda= 0.136663
statistics sampled from 9886 (9895) to 9886 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.666), E-opt: 0.2 (0.304), width: 16
Scan time: 3.090
The best scores are: opt bits E(32554)
CCDS33719.1 NGLY1 gene_id:55768|Hs108|chr3 ( 654) 4409 879.5 0
CCDS46777.1 NGLY1 gene_id:55768|Hs108|chr3 ( 612) 4152 828.8 0
CCDS46779.1 NGLY1 gene_id:55768|Hs108|chr3 ( 558) 3649 729.6 2.7e-210
CCDS46778.1 NGLY1 gene_id:55768|Hs108|chr3 ( 636) 2248 453.4 4.4e-127
>>CCDS33719.1 NGLY1 gene_id:55768|Hs108|chr3 (654 aa)
initn: 4409 init1: 4409 opt: 4409 Z-score: 4697.5 bits: 879.5 E(32554): 0
Smith-Waterman score: 4409; 100.0% identity (100.0% similar) in 654 aa overlap (1-654:1-654)
10 20 30 40 50 60
pF1KE5 MAAAALGSSSGSASPAVAELCQNTPETFLEASKLLLTYADNILRNPNDEKYRSIRIGNTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MAAAALGSSSGSASPAVAELCQNTPETFLEASKLLLTYADNILRNPNDEKYRSIRIGNTA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 FSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSNKSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 FSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSNKSH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 KVKSSQQPAASTQLPTTPSSNPSGLNQHTRNRQGQSSDPPSASTVAADSAILEVLQSNIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KVKSSQQPAASTQLPTTPSSNPSGLNQHTRNRQGQSSDPPSASTVAADSAILEVLQSNIQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 HVLVYENPALQEKALACIPVQELKRKSQEKLSRARKLDKGINISDEDFLLLELLHWFKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 HVLVYENPALQEKALACIPVQELKRKSQEKLSRARKLDKGINISDEDFLLLELLHWFKEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 FFHWVNNVLCSKCGGQTRSRDRSLLPSDDELKWGAKEVEDHYCDACQFSNRFPRYNNPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 FFHWVNNVLCSKCGGQTRSRDRSLLPSDDELKWGAKEVEDHYCDACQFSNRFPRYNNPEK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 LLETRCGRCGEWANCFTLCCRAVGFEARYVWDYTDHVWTEVYSPSQQRWLHCDACEDVCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LLETRCGRCGEWANCFTLCCRAVGFEARYVWDYTDHVWTEVYSPSQQRWLHCDACEDVCD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 KPLLYEIGWGKKLSYVIAFSKDEVVDVTWRYSCKHEEVIARRTKVKEALLRDTINGLNKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KPLLYEIGWGKKLSYVIAFSKDEVVDVTWRYSCKHEEVIARRTKVKEALLRDTINGLNKQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 RQLFLSENRRKELLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKETL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 RQLFLSENRRKELLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKETL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 FIPCENEKISKQLHLCYNIVKDRYVRVSNNNQTISGWENGVWKMESIFRKVETDWHMVYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 FIPCENEKISKQLHLCYNIVKDRYVRVSNNNQTISGWENGVWKMESIFRKVETDWHMVYL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 ARKEGSSFAYISWKFECGSVGLKVDSISIRTSSQTFQTGTVEWKLRSDTAQVELTGDNSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ARKEGSSFAYISWKFECGSVGLKVDSISIRTSSQTFQTGTVEWKLRSDTAQVELTGDNSL
550 560 570 580 590 600
610 620 630 640 650
pF1KE5 HSYADFSGATEVILEAELSRGDGDVAWQHTQLFRQSLNDHEENCLEIIIKFSDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 HSYADFSGATEVILEAELSRGDGDVAWQHTQLFRQSLNDHEENCLEIIIKFSDL
610 620 630 640 650
>>CCDS46777.1 NGLY1 gene_id:55768|Hs108|chr3 (612 aa)
initn: 4152 init1: 4152 opt: 4152 Z-score: 4424.1 bits: 828.8 E(32554): 0
Smith-Waterman score: 4152; 99.8% identity (100.0% similar) in 612 aa overlap (43-654:1-612)
20 30 40 50 60 70
pF1KE5 ASPAVAELCQNTPETFLEASKLLLTYADNILRNPNDEKYRSIRIGNTAFSTRLLPVRGAV
.:::::::::::::::::::::::::::::
CCDS46 MRNPNDEKYRSIRIGNTAFSTRLLPVRGAV
10 20 30
80 90 100 110 120 130
pF1KE5 ECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSNKSHKVKSSQQPAAST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSNKSHKVKSSQQPAAST
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE5 QLPTTPSSNPSGLNQHTRNRQGQSSDPPSASTVAADSAILEVLQSNIQHVLVYENPALQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QLPTTPSSNPSGLNQHTRNRQGQSSDPPSASTVAADSAILEVLQSNIQHVLVYENPALQE
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE5 KALACIPVQELKRKSQEKLSRARKLDKGINISDEDFLLLELLHWFKEEFFHWVNNVLCSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KALACIPVQELKRKSQEKLSRARKLDKGINISDEDFLLLELLHWFKEEFFHWVNNVLCSK
160 170 180 190 200 210
260 270 280 290 300 310
pF1KE5 CGGQTRSRDRSLLPSDDELKWGAKEVEDHYCDACQFSNRFPRYNNPEKLLETRCGRCGEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 CGGQTRSRDRSLLPSDDELKWGAKEVEDHYCDACQFSNRFPRYNNPEKLLETRCGRCGEW
220 230 240 250 260 270
320 330 340 350 360 370
pF1KE5 ANCFTLCCRAVGFEARYVWDYTDHVWTEVYSPSQQRWLHCDACEDVCDKPLLYEIGWGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ANCFTLCCRAVGFEARYVWDYTDHVWTEVYSPSQQRWLHCDACEDVCDKPLLYEIGWGKK
280 290 300 310 320 330
380 390 400 410 420 430
pF1KE5 LSYVIAFSKDEVVDVTWRYSCKHEEVIARRTKVKEALLRDTINGLNKQRQLFLSENRRKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LSYVIAFSKDEVVDVTWRYSCKHEEVIARRTKVKEALLRDTINGLNKQRQLFLSENRRKE
340 350 360 370 380 390
440 450 460 470 480 490
pF1KE5 LLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKETLFIPCENEKISKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKETLFIPCENEKISKQ
400 410 420 430 440 450
500 510 520 530 540 550
pF1KE5 LHLCYNIVKDRYVRVSNNNQTISGWENGVWKMESIFRKVETDWHMVYLARKEGSSFAYIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LHLCYNIVKDRYVRVSNNNQTISGWENGVWKMESIFRKVETDWHMVYLARKEGSSFAYIS
460 470 480 490 500 510
560 570 580 590 600 610
pF1KE5 WKFECGSVGLKVDSISIRTSSQTFQTGTVEWKLRSDTAQVELTGDNSLHSYADFSGATEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 WKFECGSVGLKVDSISIRTSSQTFQTGTVEWKLRSDTAQVELTGDNSLHSYADFSGATEV
520 530 540 550 560 570
620 630 640 650
pF1KE5 ILEAELSRGDGDVAWQHTQLFRQSLNDHEENCLEIIIKFSDL
::::::::::::::::::::::::::::::::::::::::::
CCDS46 ILEAELSRGDGDVAWQHTQLFRQSLNDHEENCLEIIIKFSDL
580 590 600 610
>>CCDS46779.1 NGLY1 gene_id:55768|Hs108|chr3 (558 aa)
initn: 3678 init1: 3649 opt: 3649 Z-score: 3888.8 bits: 729.6 E(32554): 2.7e-210
Smith-Waterman score: 3649; 99.8% identity (100.0% similar) in 538 aa overlap (1-538:1-538)
10 20 30 40 50 60
pF1KE5 MAAAALGSSSGSASPAVAELCQNTPETFLEASKLLLTYADNILRNPNDEKYRSIRIGNTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAAAALGSSSGSASPAVAELCQNTPETFLEASKLLLTYADNILRNPNDEKYRSIRIGNTA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 FSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSNKSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 FSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSNKSH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 KVKSSQQPAASTQLPTTPSSNPSGLNQHTRNRQGQSSDPPSASTVAADSAILEVLQSNIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KVKSSQQPAASTQLPTTPSSNPSGLNQHTRNRQGQSSDPPSASTVAADSAILEVLQSNIQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 HVLVYENPALQEKALACIPVQELKRKSQEKLSRARKLDKGINISDEDFLLLELLHWFKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 HVLVYENPALQEKALACIPVQELKRKSQEKLSRARKLDKGINISDEDFLLLELLHWFKEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 FFHWVNNVLCSKCGGQTRSRDRSLLPSDDELKWGAKEVEDHYCDACQFSNRFPRYNNPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 FFHWVNNVLCSKCGGQTRSRDRSLLPSDDELKWGAKEVEDHYCDACQFSNRFPRYNNPEK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 LLETRCGRCGEWANCFTLCCRAVGFEARYVWDYTDHVWTEVYSPSQQRWLHCDACEDVCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LLETRCGRCGEWANCFTLCCRAVGFEARYVWDYTDHVWTEVYSPSQQRWLHCDACEDVCD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 KPLLYEIGWGKKLSYVIAFSKDEVVDVTWRYSCKHEEVIARRTKVKEALLRDTINGLNKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KPLLYEIGWGKKLSYVIAFSKDEVVDVTWRYSCKHEEVIARRTKVKEALLRDTINGLNKQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 RQLFLSENRRKELLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKETL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 RQLFLSENRRKELLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKETL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 FIPCENEKISKQLHLCYNIVKDRYVRVSNNNQTISGWENGVWKMESIFRKVETDWHMVYL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS46 FIPCENEKISKQLHLCYNIVKDRYVRVSNNNQTISGWENGVWKMESIFRKVETDWHMITV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 ARKEGSSFAYISWKFECGSVGLKVDSISIRTSSQTFQTGTVEWKLRSDTAQVELTGDNSL
CCDS46 FTPMLIFLVPLKLFWKQN
550
>>CCDS46778.1 NGLY1 gene_id:55768|Hs108|chr3 (636 aa)
initn: 4033 init1: 2248 opt: 2248 Z-score: 2395.1 bits: 453.4 E(32554): 4.4e-127
Smith-Waterman score: 3996; 93.7% identity (94.5% similar) in 655 aa overlap (1-654:1-636)
10 20 30 40 50 60
pF1KE5 MAAAALGSSSGSASPAVAELCQNTPETFLEASKLLLTYADNILRNPNDEKYRSIRIGNTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAAAALGSSSGSASPAVAELCQNTPETFLEASKLLLTYADNILRNPNDEKYRSIRIGNTA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 FSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSNKSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 FSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSNKSH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 KVKSSQQPAASTQLPTTPSSNPSGLNQHTRNRQGQSSDPPSASTVAADSAILEVLQSNIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KVKSSQQPAASTQLPTTPSSNPSGLNQHTRNRQGQSSDPPSASTVAADSAILEVLQSNIQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 HVLVYENPALQEKALACIPVQELKRKSQEKLSRARKLDKGINISDEDFLLLELLHWFKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 HVLVYENPALQEKALACIPVQELKRKSQEKLSRARKLDKGINISDEDFLLLELLHWFKEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 FFHWVNNVLCSKCGGQTRSRDRSLLPSDDELKWGAKEVEDHYCDACQFSNRFPRYNNPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 FFHWVNNVLCSKCGGQTRSRDRSLLPSDDELKWGAKEVEDHYCDACQFSNRFPRYNNPEK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 LLETRCGRCGEWANCFTLCCRAVGFEARYVWDYTDHVWTEVYSPSQQRWLHCDACEDVCD
::::::::::::::::::::::::::::::::::. :: :
CCDS46 LLETRCGRCGEWANCFTLCCRAVGFEARYVWDYTE----------LQRTLSLKLTT----
310 320 330 340
370 380 390 400 410
pF1KE5 KPLLYEIGWGKKLSYVIAFSKD-EVVDVTWRYSCKHEEVIARRTKVKEALLRDTINGLNK
: :: :: . . .: .::::::::::::::::::::::::::::::::::::
CCDS46 ---LKEI--GKTFLRISKRQKLIQVVDVTWRYSCKHEEVIARRTKVKEALLRDTINGLNK
350 360 370 380 390 400
420 430 440 450 460 470
pF1KE5 QRQLFLSENRRKELLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QRQLFLSENRRKELLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKET
410 420 430 440 450 460
480 490 500 510 520 530
pF1KE5 LFIPCENEKISKQLHLCYNIVKDRYVRVSNNNQTISGWENGVWKMESIFRKVETDWHMVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LFIPCENEKISKQLHLCYNIVKDRYVRVSNNNQTISGWENGVWKMESIFRKVETDWHMVY
470 480 490 500 510 520
540 550 560 570 580 590
pF1KE5 LARKEGSSFAYISWKFECGSVGLKVDSISIRTSSQTFQTGTVEWKLRSDTAQVELTGDNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LARKEGSSFAYISWKFECGSVGLKVDSISIRTSSQTFQTGTVEWKLRSDTAQVELTGDNS
530 540 550 560 570 580
600 610 620 630 640 650
pF1KE5 LHSYADFSGATEVILEAELSRGDGDVAWQHTQLFRQSLNDHEENCLEIIIKFSDL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LHSYADFSGATEVILEAELSRGDGDVAWQHTQLFRQSLNDHEENCLEIIIKFSDL
590 600 610 620 630
654 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 05:57:47 2016 done: Tue Nov 8 05:57:47 2016
Total Scan time: 3.090 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]