Result of FASTA (ccds) for
pFN21AE5667
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5667, 523 aa
1>>>pF1KE5667 523 - 523 aa - 523 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8681+/-0.00119; mu= 10.2589+/- 0.070
mean_var=89.2474+/-18.049, 0's: 0 Z-trim(102.7): 28 B-trim: 0 in 0/49
Lambda= 0.135761
statistics sampled from 7043 (7056) to 7043 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.557), E-opt: 0.2 (0.217), width: 16
Scan time: 2.490
The best scores are: opt bits E(32554)
CCDS58971.1 PKD2L2 gene_id:27039|Hs108|chr5 ( 523) 3469 690.1 1.6e-198
CCDS43367.1 PKD2L2 gene_id:27039|Hs108|chr5 ( 613) 2589 517.8 1.4e-146
CCDS78062.1 PKD2L2 gene_id:27039|Hs108|chr5 ( 624) 2589 517.8 1.4e-146
CCDS58972.1 PKD2L2 gene_id:27039|Hs108|chr5 ( 602) 2199 441.4 1.4e-123
CCDS3627.1 PKD2 gene_id:5311|Hs108|chr4 ( 968) 1231 251.8 2.5e-66
CCDS7492.1 PKD2L1 gene_id:9033|Hs108|chr10 ( 805) 1221 249.9 8.3e-66
>>CCDS58971.1 PKD2L2 gene_id:27039|Hs108|chr5 (523 aa)
initn: 3469 init1: 3469 opt: 3469 Z-score: 3677.6 bits: 690.1 E(32554): 1.6e-198
Smith-Waterman score: 3469; 99.8% identity (99.8% similar) in 523 aa overlap (1-523:1-523)
10 20 30 40 50 60
pF1KE5 MAEASRWHRGGASKHKLHYRKEVEITTTLQELLLYFIFLINLCILTFGMVNPHMYYLNKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MAEASRWHRGGASKHKLHYRKEVEITTTLQELLLYFIFLINLCILTFGMVNPHMYYLNKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 MSSLFLDTSVPGEERTNFKSIRSITDFWKFMEGPLLEGLYWDSWYNNQQLYNLKNSSRIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MSSLFLDTSVPGEERTNFKSIRSITDFWKFMEGPLLEGLYWDSWYNNQQLYNLKNSSRIY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 YENILLGVPRVRQLKVRNNTCKVYSSFQSLMSECYGKYTSANEDLSNFGLQINTEWRYST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 YENILLGVPRVRQLKVRNNTCKVYSSFQSLMSECYGKYTSANEDLSNFGLQINTEWRYST
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SNTNSPWHWGFLGVYRNGGYIFTLSKSKSETKNKFIDLRLNSWITRGTRVIFIDFSLYNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SNTNSPWHWGFLGVYRNGGYIFTLSKSKSETKNKFIDLRLNSWITRGTRVIFIDFSLYNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 NVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSYYDYFIASCEITFCIFLFVFTTQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSYYDYFIASCEITFCIFLFVFTTQE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 VKKIKEFKSAYFKSIWNWLELLLLLLCFVAVSFNTYYNVQIFLLLGQLLKSTEKYSDFYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VKKIKEFKSAYFKSIWNWLELLLLLLCFVAVSFNTYYNVQIFLLLGQLLKSTEKYSDFYF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 LACWHIYYNNIIAITIFFAWIKNMFLAIINDTYSEVKADYSIGRRPDFELGKMIKQSYKN
::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::
CCDS58 LACWHIYYNNIIAITIFFAWIKNMFLAIINDTYSEVKADYSIGRRLDFELGKMIKQSYKN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 VLEKFRLKKAQKDEDKKTKGSGDLAEQARREGFDENEIQNAEQMKKWKERLEKKYYSMEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VLEKFRLKKAQKDEDKKTKGSGDLAEQARREGFDENEIQNAEQMKKWKERLEKKYYSMEI
430 440 450 460 470 480
490 500 510 520
pF1KE5 QDDYQPVTQEEFRELFLYAVELEKELHYINLKLNQVVRKVSAL
:::::::::::::::::::::::::::::::::::::::::::
CCDS58 QDDYQPVTQEEFRELFLYAVELEKELHYINLKLNQVVRKVSAL
490 500 510 520
>>CCDS43367.1 PKD2L2 gene_id:27039|Hs108|chr5 (613 aa)
initn: 3278 init1: 2576 opt: 2589 Z-score: 2744.9 bits: 517.8 E(32554): 1.4e-146
Smith-Waterman score: 2815; 81.6% identity (81.6% similar) in 555 aa overlap (1-454:1-555)
10 20 30 40 50 60
pF1KE5 MAEASRWHRGGASKHKLHYRKEVEITTTLQELLLYFIFLINLCILTFGMVNPHMYYLNKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MAEASRWHRGGASKHKLHYRKEVEITTTLQELLLYFIFLINLCILTFGMVNPHMYYLNKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 MSSLFLDTSVPGEERTNFKSIRSITDFWKFMEGPLLEGLYWDSWYNNQQLYNLKNSSRIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MSSLFLDTSVPGEERTNFKSIRSITDFWKFMEGPLLEGLYWDSWYNNQQLYNLKNSSRIY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 YENILLGVPRVRQLKVRNNTCKVYSSFQSLMSECYGKYTSANEDLSNFGLQINTEWRYST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 YENILLGVPRVRQLKVRNNTCKVYSSFQSLMSECYGKYTSANEDLSNFGLQINTEWRYST
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SNTNSPWHWGFLGVYRNGGYIFTLSKSKSETKNKFIDLRLNSWITRGTRVIFIDFSLYNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SNTNSPWHWGFLGVYRNGGYIFTLSKSKSETKNKFIDLRLNSWITRGTRVIFIDFSLYNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 NVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSYYDYFIASCEITFCIFLFVFTTQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSYYDYFIASCEITFCIFLFVFTTQE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 VKKIKEFKSAYFKSIWNWLELLLLLLCFVAVSFNTYYNVQIFLLLGQLLKSTEKYSDFYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VKKIKEFKSAYFKSIWNWLELLLLLLCFVAVSFNTYYNVQIFLLLGQLLKSTEKYSDFYF
310 320 330 340 350 360
370 380
pF1KE5 LACWHIYYNNIIAITIFFAWIK--------------------------------------
::::::::::::::::::::::
CCDS43 LACWHIYYNNIIAITIFFAWIKIFKFISFNKTMSQLSSTLSRCVKDIVGFAIMFFIIFFA
370 380 390 400 410 420
pF1KE5 ------------------------------------------------------------
CCDS43 YAQLGFLVFGSQVDDFSTFQNSIFAQFRIVLGDFNFAGIQQANPILGPIYFITFIFFVFF
430 440 450 460 470 480
390 400 410 420 430
pF1KE5 ---NMFLAIINDTYSEVKADYSIGRRPDFELGKMIKQSYKNVLEKFRLKKAQKDEDKKTK
::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
CCDS43 VLLNMFLAIINDTYSEVKADYSIGRRLDFELGKMIKQSYKNVLEKFRLKKAQKDEDKKTK
490 500 510 520 530 540
440 450 460 470 480 490
pF1KE5 GSGDLAEQARREGFDENEIQNAEQMKKWKERLEKKYYSMEIQDDYQPVTQEEFRELFLYA
:::::::::::::::
CCDS43 GSGDLAEQARREGFDENEIQNAEQMKKWKERLEKKYYSMEIQDDYQPVTQEEFRDGTTTK
550 560 570 580 590 600
>>CCDS78062.1 PKD2L2 gene_id:27039|Hs108|chr5 (624 aa)
initn: 3455 init1: 2576 opt: 2589 Z-score: 2744.8 bits: 517.8 E(32554): 1.4e-146
Smith-Waterman score: 2815; 81.6% identity (81.6% similar) in 555 aa overlap (1-454:1-555)
10 20 30 40 50 60
pF1KE5 MAEASRWHRGGASKHKLHYRKEVEITTTLQELLLYFIFLINLCILTFGMVNPHMYYLNKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 MAEASRWHRGGASKHKLHYRKEVEITTTLQELLLYFIFLINLCILTFGMVNPHMYYLNKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 MSSLFLDTSVPGEERTNFKSIRSITDFWKFMEGPLLEGLYWDSWYNNQQLYNLKNSSRIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 MSSLFLDTSVPGEERTNFKSIRSITDFWKFMEGPLLEGLYWDSWYNNQQLYNLKNSSRIY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 YENILLGVPRVRQLKVRNNTCKVYSSFQSLMSECYGKYTSANEDLSNFGLQINTEWRYST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 YENILLGVPRVRQLKVRNNTCKVYSSFQSLMSECYGKYTSANEDLSNFGLQINTEWRYST
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SNTNSPWHWGFLGVYRNGGYIFTLSKSKSETKNKFIDLRLNSWITRGTRVIFIDFSLYNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 SNTNSPWHWGFLGVYRNGGYIFTLSKSKSETKNKFIDLRLNSWITRGTRVIFIDFSLYNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 NVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSYYDYFIASCEITFCIFLFVFTTQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 NVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSYYDYFIASCEITFCIFLFVFTTQE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 VKKIKEFKSAYFKSIWNWLELLLLLLCFVAVSFNTYYNVQIFLLLGQLLKSTEKYSDFYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 VKKIKEFKSAYFKSIWNWLELLLLLLCFVAVSFNTYYNVQIFLLLGQLLKSTEKYSDFYF
310 320 330 340 350 360
370 380
pF1KE5 LACWHIYYNNIIAITIFFAWIK--------------------------------------
::::::::::::::::::::::
CCDS78 LACWHIYYNNIIAITIFFAWIKIFKFISFNKTMSQLSSTLSRCVKDIVGFAIMFFIIFFA
370 380 390 400 410 420
pF1KE5 ------------------------------------------------------------
CCDS78 YAQLGFLVFGSQVDDFSTFQNSIFAQFRIVLGDFNFAGIQQANPILGPIYFITFIFFVFF
430 440 450 460 470 480
390 400 410 420 430
pF1KE5 ---NMFLAIINDTYSEVKADYSIGRRPDFELGKMIKQSYKNVLEKFRLKKAQKDEDKKTK
::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
CCDS78 VLLNMFLAIINDTYSEVKADYSIGRRLDFELGKMIKQSYKNVLEKFRLKKAQKDEDKKTK
490 500 510 520 530 540
440 450 460 470 480 490
pF1KE5 GSGDLAEQARREGFDENEIQNAEQMKKWKERLEKKYYSMEIQDDYQPVTQEEFRELFLYA
:::::::::::::::
CCDS78 GSGDLAEQARREGFDENEIQNAEQMKKWKERLEKKYYSMEIQDDYQPVTQEEFRELFLYA
550 560 570 580 590 600
>--
initn: 442 init1: 442 opt: 442 Z-score: 472.1 bits: 97.3 E(32554): 5.6e-20
Smith-Waterman score: 442; 100.0% identity (100.0% similar) in 69 aa overlap (455-523:556-624)
430 440 450 460 470 480
pF1KE5 FRLKKAQKDEDKKTKGSGDLAEQARREGFDENEIQNAEQMKKWKERLEKKYYSMEIQDDY
::::::::::::::::::::::::::::::
CCDS78 FRLKKAQKDEDKKTKGSGDLAEQARREGFDENEIQNAEQMKKWKERLEKKYYSMEIQDDY
530 540 550 560 570 580
490 500 510 520
pF1KE5 QPVTQEEFRELFLYAVELEKELHYINLKLNQVVRKVSAL
:::::::::::::::::::::::::::::::::::::::
CCDS78 QPVTQEEFRELFLYAVELEKELHYINLKLNQVVRKVSAL
590 600 610 620
>>CCDS58972.1 PKD2L2 gene_id:27039|Hs108|chr5 (602 aa)
initn: 3078 init1: 2199 opt: 2199 Z-score: 2332.2 bits: 441.4 E(32554): 1.4e-123
Smith-Waterman score: 2765; 78.5% identity (78.5% similar) in 577 aa overlap (1-476:1-555)
10 20 30 40 50 60
pF1KE5 MAEASRWHRGGASKHKLHYRKEVEITTTLQELLLYFIFLINLCILTFGMVNPHMYYLNKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MAEASRWHRGGASKHKLHYRKEVEITTTLQELLLYFIFLINLCILTFGMVNPHMYYLNKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 MSSLFLDTSVPGEERTNFKSIRSITDFWKFMEGPLLEGLYWDSWYNNQQLYNLKNSSRIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MSSLFLDTSVPGEERTNFKSIRSITDFWKFMEGPLLEGLYWDSWYNNQQLYNLKNSSRIY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 YENILLGVPRVRQLKVRNNTCKVYSSFQSLMSECYGKYTSANEDLSNFGLQINTEWRYST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 YENILLGVPRVRQLKVRNNTCKVYSSFQSLMSECYGKYTSANEDLSNFGLQINTEWRYST
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SNTNSPWHWGFLGVYRNGGYIFTLSKSKSETKNKFIDLRLNSWITRGTRVIFIDFSLYNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SNTNSPWHWGFLGVYRNGGYIFTLSKSKSETKNKFIDLRLNSWITRGTRVIFIDFSLYNA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 NVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSYYDYFIASCEITFCIFLFVFTTQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSYYDYFIASCEITFCIFLFVFTTQE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 VKKIKEFKSAYFKSIWNWLELLLLLLCFVAVSFNTYYNVQIFLLLGQLLKSTEKYSDFYF
:::::::::::::::::::::::::: ::::::::::::
CCDS58 VKKIKEFKSAYFKSIWNWLELLLLLL----------------------LKSTEKYSDFYF
310 320 330
370 380
pF1KE5 LACWHIYYNNIIAITIFFAWIK--------------------------------------
::::::::::::::::::::::
CCDS58 LACWHIYYNNIIAITIFFAWIKIFKFISFNKTMSQLSSTLSRCVKDIVGFAIMFFIIFFA
340 350 360 370 380 390
pF1KE5 ------------------------------------------------------------
CCDS58 YAQLGFLVFGSQVDDFSTFQNSIFAQFRIVLGDFNFAGIQQANPILGPIYFITFIFFVFF
400 410 420 430 440 450
390 400 410 420 430
pF1KE5 ---NMFLAIINDTYSEVKADYSIGRRPDFELGKMIKQSYKNVLEKFRLKKAQKDEDKKTK
::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
CCDS58 VLLNMFLAIINDTYSEVKADYSIGRRLDFELGKMIKQSYKNVLEKFRLKKAQKDEDKKTK
460 470 480 490 500 510
440 450 460 470 480 490
pF1KE5 GSGDLAEQARREGFDENEIQNAEQMKKWKERLEKKYYSMEIQDDYQPVTQEEFRELFLYA
:::::::::::::::::::::::::::::::::::::
CCDS58 GSGDLAEQARREGFDENEIQNAEQMKKWKERLEKKYYSMEIQDDYQPVTQEEFRELFLYA
520 530 540 550 560 570
500 510 520
pF1KE5 VELEKELHYINLKLNQVVRKVSAL
CCDS58 VELEKELHYINLKLNQVVRKVSAL
580 590 600
>>CCDS3627.1 PKD2 gene_id:5311|Hs108|chr4 (968 aa)
initn: 1183 init1: 582 opt: 1231 Z-score: 1304.1 bits: 251.8 E(32554): 2.5e-66
Smith-Waterman score: 1231; 45.0% identity (77.5% similar) in 382 aa overlap (21-401:213-591)
10 20 30 40 50
pF1KE5 MAEASRWHRGGASKHKLHYRKEVEITTTLQELLLYFIFLINLCILTFGMV
.: . ..:.::. :..::: :::::.::.
CCDS36 QPPRVAWAERLVRGLRGLWGTRLMEESSTNREKYLKSVLRELVTYLLFLIVLCILTYGMM
190 200 210 220 230 240
60 70 80 90 100 110
pF1KE5 NPHMYYLNKVMSSLFLDTSVPGEERTNFKSIRSITDFWKFMEGPLLEGLYWDSWYNNQQL
. ..:: ...::.::::: : :.::::.. :. ::::: :: ::.:::: .::
CCDS36 SSNVYYYTRMMSQLFLDTPVSKTEKTNFKTLSSMEDFWKFTEGSLLDGLYWKMQPSNQTE
250 260 270 280 290 300
120 130 140 150 160 170
pF1KE5 YNLKNSSRIYYENILLGVPRVRQLKVRNNTCKVYSSFQSLMSECYGKYTSANEDLSNFGL
. : : :.:::.::::::.:::.:::..:.. ..... ..::: :. ..:: . ::
CCDS36 AD--NRSFIFYENLLLGVPRIRQLRVRNGSCSIPQDLRDEIKECYDVYSVSSEDRAPFGP
310 320 330 340 350 360
180 190 200 210 220
pF1KE5 QINTEWRYST-SNTNSPWHWGFLGVYRNGGYIFTLSKSKSETKNKFIDLRLNSWITRGTR
. .: : :.. .. :. :::....: ..:: . ::... :: . .:. : :. ::::
CCDS36 RNGTAWIYTSEKDLNGSSHWGIIATYSGAGYYLDLSRTREETAAQVASLKKNVWLDRGTR
370 380 390 400 410 420
230 240 250 260 270 280
pF1KE5 VIFIDFSLYNANVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSYYDYFIASCEITF
. :::::.::::.::::..::..:::::::.. :::: .::.:::. .:.:.:.::: :
CCDS36 ATFIDFSVYNANINLFCVVRLLVEFPATGGVIPSWQFQPLKLIRYVTTFDFFLAACEIIF
430 440 450 460 470 480
290 300 310 320 330 340
pF1KE5 CIFLFVFTTQEVKKIKEFKSAYFKSIWNWLELLLLLLCFVAVSFNTYYNVQIFLLLGQLL
:.:.: ....:. .:. : ::.:.:: :......: ::...: : . .. .:: :.:
CCDS36 CFFIFYYVVEEILEIRIHKLHYFRSFWNCLDVVIVVLSVVAIGINIYRTSNVEVLL-QFL
490 500 510 520 530
350 360 370 380 390 400
pF1KE5 KSTEKYSDFYFLACWHIYYNNIIAITIFFAWIKNMFLAIINDTYSEVKADYSIGRRPDFE
.. . . .: :: :.: .::: :.:.::.::: . . .: :.:.... .:
CCDS36 EDQNTFPNFEHLAYWQIQFNNIAAVTVFFVWIKLFKFINFNRTMSQLSTTMSRCAKDLFG
540 550 560 570 580 590
410 420 430 440 450 460
pF1KE5 LGKMIKQSYKNVLEKFRLKKAQKDEDKKTKGSGDLAEQARREGFDENEIQNAEQMKKWKE
CCDS36 FAIMFFIIFLAYAQLAYLVFGTQVDDFSTFQECIFTQFRIILGDINFAEIEEANRVLGPI
600 610 620 630 640 650
>>CCDS7492.1 PKD2L1 gene_id:9033|Hs108|chr10 (805 aa)
initn: 1051 init1: 819 opt: 1221 Z-score: 1294.9 bits: 249.9 E(32554): 8.3e-66
Smith-Waterman score: 1221; 45.9% identity (76.3% similar) in 379 aa overlap (21-398:93-468)
10 20 30 40 50
pF1KE5 MAEASRWHRGGASKHKLHYRKEVEITTTLQELLLYFIFLINLCILTFGMV
.:. : :::.:::.:..::...:.::.::.
CCDS74 RTQVSSCCLHICQGIRGLWGTTLTENTAENRELYIKTTLRELLVYIVFLVDICLLTYGMT
70 80 90 100 110 120
60 70 80 90 100 110
pF1KE5 NPHMYYLNKVMSSLFLDTSVPGEERTNFKSIRSITDFWKFMEGPLLEGLYWDSWYNNQQL
. :: .:::: ::: : :.. ..:..: :..::: : .::::..::: .:::::.:
CCDS74 SSSAYYYTKVMSELFLHT--PSDTGVSFQAISSMADFWDFAQGPLLDSLYWTKWYNNQSL
130 140 150 160 170 180
120 130 140 150 160 170
pF1KE5 YNLKNSSRIYYENILLGVPRVRQLKVRNNTCKVYSSFQSLMSECYGKYTSANEDLSNFGL
. . : :::::.::::::.:::::::..: :. .:. . :: :. .:. ::
CCDS74 GH-GSHSFIYYENMLLGVPRLRQLKVRNDSCVVHEDFREDILSCYDVYSPDKEEQLPFGP
190 200 210 220 230
180 190 200 210 220
pF1KE5 QINTEWRYSTSNTNSPW-HWGFLGVYRNGGYIFTLSKSKSETKNKFIDLRLNSWITRGTR
.: : : ... . . ::: : : .::: . : :.. . . . :. . :. ::::
CCDS74 FNGTAWTYHSQDELGGFSHWGRLTSYSGGGYYLDLPGSRQGSAEALRALQEGLWLDRGTR
240 250 260 270 280 290
230 240 250 260 270 280
pF1KE5 VIFIDFSLYNANVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSYYDYFIASCEITF
:.:::::.::::.::::..:::.::::::: . :::. .:::.:::: .:.::..::. :
CCDS74 VVFIDFSVYNANINLFCVLRLVVEFPATGGAIPSWQIRTVKLIRYVSNWDFFIVGCEVIF
300 310 320 330 340 350
290 300 310 320 330 340
pF1KE5 CIFLFVFTTQEVKKIKEFKSAYFKSIWNWLELLLLLLCFVAVSFNTYYNVQIFLLLGQLL
:.:.: ....:. ... . :..:::: :.:...:: .:::.:. . .... :.:.::
CCDS74 CVFIFYYVVEEILELHIHRLRYLSSIWNILDLVVILLSIVAVGFHIFRTLEVNRLMGKLL
360 370 380 390 400 410
350 360 370 380 390 400
pF1KE5 KSTEKYSDFYFLACWHIYYNNIIAITIFFAWIKNMFLAIINDTYSEVKADYSIGRRPDFE
.. . :.:: ::: :. :::. :...:::::: . .: :......
CCDS74 QQPNTYADFEFLAFWQTQYNNMNAVNLFFAWIKIFKYISFNKTMTQLSSTLARCAKDILG
420 430 440 450 460 470
410 420 430 440 450 460
pF1KE5 LGKMIKQSYKNVLEKFRLKKAQKDEDKKTKGSGDLAEQARREGFDENEIQNAEQMKKWKE
CCDS74 FAVMFFIVFFAYAQLGYLLFGTQVENFSTFIKCIFTQFRIILGDFDYNAIDNANRILGPA
480 490 500 510 520 530
523 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 05:41:42 2016 done: Tue Nov 8 05:41:43 2016
Total Scan time: 2.490 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]