Result of FASTA (ccds) for
pFN21AE5663
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5663, 519 aa
1>>>pF1KE5663 519 - 519 aa - 519 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8585+/-0.00103; mu= 14.5534+/- 0.061
mean_var=65.1860+/-12.779, 0's: 0 Z-trim(102.8): 28 B-trim: 0 in 0/49
Lambda= 0.158854
statistics sampled from 7103 (7108) to 7103 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.587), E-opt: 0.2 (0.218), width: 16
Scan time: 2.990
The best scores are: opt bits E(32554)
CCDS3422.1 LAP3 gene_id:51056|Hs108|chr4 ( 519) 3410 790.8 0
CCDS56201.1 NPEPL1 gene_id:79716|Hs108|chr20 ( 475) 470 117.0 4.7e-26
CCDS56200.1 NPEPL1 gene_id:79716|Hs108|chr20 ( 495) 470 117.0 4.9e-26
CCDS46621.1 NPEPL1 gene_id:79716|Hs108|chr20 ( 523) 470 117.1 5.1e-26
>>CCDS3422.1 LAP3 gene_id:51056|Hs108|chr4 (519 aa)
initn: 3410 init1: 3410 opt: 3410 Z-score: 4222.0 bits: 790.8 E(32554): 0
Smith-Waterman score: 3410; 100.0% identity (100.0% similar) in 519 aa overlap (1-519:1-519)
10 20 30 40 50 60
pF1KE5 MFLLPLPAAGRVVVRRLAVRRFGSRSLSTADMTKGLVLGIYSKEKEDDVPQFTSAGENFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MFLLPLPAAGRVVVRRLAVRRFGSRSLSTADMTKGLVLGIYSKEKEDDVPQFTSAGENFD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 KLLAGKLRETLNISGPPLKAGKTRTFYGLHQDFPSVVLVGLGKKAAGIDEQENWHEGKEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 KLLAGKLRETLNISGPPLKAGKTRTFYGLHQDFPSVVLVGLGKKAAGIDEQENWHEGKEN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 IRAAVAAGCRQIQDLELSSVEVDPCGDAQAAAEGAVLGLYEYDDLKQKKKMAVSAKLYGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 IRAAVAAGCRQIQDLELSSVEVDPCGDAQAAAEGAVLGLYEYDDLKQKKKMAVSAKLYGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 GDQEAWQKGVLFASGQNLARQLMETPANEMTPTRFAEIIEKNLKSASSKTEVHIRPKSWI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 GDQEAWQKGVLFASGQNLARQLMETPANEMTPTRFAEIIEKNLKSASSKTEVHIRPKSWI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 EEQAMGSFLSVAKGSDEPPVFLEIHYKGSPNANEPPLVFVGKGITFDSGGISIKASANMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 EEQAMGSFLSVAKGSDEPPVFLEIHYKGSPNANEPPLVFVGKGITFDSGGISIKASANMD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 LMRADMGGAATICSAIVSAAKLNLPINIIGLAPLCENMPSGKANKPGDVVRAKNGKTIQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LMRADMGGAATICSAIVSAAKLNLPINIIGLAPLCENMPSGKANKPGDVVRAKNGKTIQV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 DNTDAEGRLILADALCYAHTFNPKVILNAATLTGAMDVALGSGATGVFTNSSWLWNKLFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 DNTDAEGRLILADALCYAHTFNPKVILNAATLTGAMDVALGSGATGVFTNSSWLWNKLFE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 ASIETGDRVWRMPLFEHYTRQVVDCQLADVNNIGKYRSAGACTAAAFLKEFVTHPKWAHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 ASIETGDRVWRMPLFEHYTRQVVDCQLADVNNIGKYRSAGACTAAAFLKEFVTHPKWAHL
430 440 450 460 470 480
490 500 510
pF1KE5 DIAGVMTNKDEVPYLRKGMTGRPTRTLIEFLLRFSQDNA
:::::::::::::::::::::::::::::::::::::::
CCDS34 DIAGVMTNKDEVPYLRKGMTGRPTRTLIEFLLRFSQDNA
490 500 510
>>CCDS56201.1 NPEPL1 gene_id:79716|Hs108|chr20 (475 aa)
initn: 448 init1: 289 opt: 470 Z-score: 581.2 bits: 117.0 E(32554): 4.7e-26
Smith-Waterman score: 470; 34.1% identity (63.9% similar) in 302 aa overlap (195-483:129-418)
170 180 190 200 210 220
pF1KE5 LKQKKKMAVSAKLYGSGDQEAWQKGVLFASGQNLARQLMETPANEMTPTRFAEIIEKNLK
: :: ....:: :::. : : :.: :
CCDS56 KTVTVEFFLVGQDNGPVEVSTLQCLANATDGVRLAARIVDTPCNEMNTDTFLEEINKVGK
100 110 120 130 140 150
230 240 250 260 270 280
pF1KE5 SASSKTEVHIRPKSWIEEQAMGSFLSVAKGSDEPPVFLEIHYKGSPNANEPPLVFVGKGI
. . :: . .. ...:.. .:.:.. .::.. . . .:.. ...:::::
CCDS56 ELGIIPTI-IRDEE-LKTRGFGGIYGVGKAALHPPALAVLSH--TPDGATQTIAWVGKGI
160 170 180 190 200 210
290 300 310 320 330 340
pF1KE5 TFDSGGISIKASANMDLMRADMGGAATICSAIVSAAKLNLPINIIGLAPLCENMPSGKAN
..:.::.:::....: :. : ::::.. .:. .: : .. :. .. : :: . .:.
CCDS56 VYDTGGLSIKGKTTMPGMKRDCGGAAAVLGAFRAAIKQGFKDNLHAVFCLAENSVGPNAT
220 230 240 250 260 270
350 360 370 380 390 400
pF1KE5 KPGDVVRAKNGKTIQVDNTDAEGRLILADALCYA-HTFNPKVILNAATLTGAMDVALGSG
.: :. .:::....::::::::.:::.. :: . .. .::. ::::::. .: :.
CCDS56 RPDDIHLLYSGKTVEINNTDAEGRLVLADGVSYACKDLGADIILDMATLTGAQGIATGKY
280 290 300 310 320 330
410 420 430 440 450
pF1KE5 ATGVFTNSSWLWNKLFEASIETGDRVWRMPL-------FEHYTRQVVDCQ--LADVNNIG
..:.:::. .:. . :: : :: : ..: :.: . .:: .:
CCDS56 HAAVLTNSAEWEAACVKAGRKCGDLV--HPLVYCPELHFSEFTSAVADMKNSVADRDN--
340 350 360 370 380 390
460 470 480 490 500 510
pF1KE5 KYRSAGACTAAAFLKEFVTH--PK-WAHLDIAGVMTNKDEVPYLRKGMTGRPTRTLIEFL
: ..: :. :. . : :.:::::
CCDS56 ---SPSSC-AGLFIASHIGFDWPGVWVHLDIAAPVHAGERATGFGVALLLALFGRASEDP
400 410 420 430 440
pF1KE5 LRFSQDNA
CCDS56 LLNLVSPLGCEVDVEEGDLGRDSKRRRLV
450 460 470
>>CCDS56200.1 NPEPL1 gene_id:79716|Hs108|chr20 (495 aa)
initn: 448 init1: 289 opt: 470 Z-score: 580.9 bits: 117.0 E(32554): 4.9e-26
Smith-Waterman score: 470; 34.1% identity (63.9% similar) in 302 aa overlap (195-483:149-438)
170 180 190 200 210 220
pF1KE5 LKQKKKMAVSAKLYGSGDQEAWQKGVLFASGQNLARQLMETPANEMTPTRFAEIIEKNLK
: :: ....:: :::. : : :.: :
CCDS56 KTVTVEFFLVGQDNGPVEVSTLQCLANATDGVRLAARIVDTPCNEMNTDTFLEEINKVGK
120 130 140 150 160 170
230 240 250 260 270 280
pF1KE5 SASSKTEVHIRPKSWIEEQAMGSFLSVAKGSDEPPVFLEIHYKGSPNANEPPLVFVGKGI
. . :: . .. ...:.. .:.:.. .::.. . . .:.. ...:::::
CCDS56 ELGIIPTI-IRDEE-LKTRGFGGIYGVGKAALHPPALAVLSH--TPDGATQTIAWVGKGI
180 190 200 210 220 230
290 300 310 320 330 340
pF1KE5 TFDSGGISIKASANMDLMRADMGGAATICSAIVSAAKLNLPINIIGLAPLCENMPSGKAN
..:.::.:::....: :. : ::::.. .:. .: : .. :. .. : :: . .:.
CCDS56 VYDTGGLSIKGKTTMPGMKRDCGGAAAVLGAFRAAIKQGFKDNLHAVFCLAENSVGPNAT
240 250 260 270 280 290
350 360 370 380 390 400
pF1KE5 KPGDVVRAKNGKTIQVDNTDAEGRLILADALCYA-HTFNPKVILNAATLTGAMDVALGSG
.: :. .:::....::::::::.:::.. :: . .. .::. ::::::. .: :.
CCDS56 RPDDIHLLYSGKTVEINNTDAEGRLVLADGVSYACKDLGADIILDMATLTGAQGIATGKY
300 310 320 330 340 350
410 420 430 440 450
pF1KE5 ATGVFTNSSWLWNKLFEASIETGDRVWRMPL-------FEHYTRQVVDCQ--LADVNNIG
..:.:::. .:. . :: : :: : ..: :.: . .:: .:
CCDS56 HAAVLTNSAEWEAACVKAGRKCGDLV--HPLVYCPELHFSEFTSAVADMKNSVADRDN--
360 370 380 390 400 410
460 470 480 490 500 510
pF1KE5 KYRSAGACTAAAFLKEFVTH--PK-WAHLDIAGVMTNKDEVPYLRKGMTGRPTRTLIEFL
: ..: :. :. . : :.:::::
CCDS56 ---SPSSC-AGLFIASHIGFDWPGVWVHLDIAAPVHAGERATGFGVALLLALFGRASEDP
420 430 440 450 460
pF1KE5 LRFSQDNA
CCDS56 LLNLVSPLGCEVDVEEGDLGRDSKRRRLV
470 480 490
>>CCDS46621.1 NPEPL1 gene_id:79716|Hs108|chr20 (523 aa)
initn: 448 init1: 289 opt: 470 Z-score: 580.5 bits: 117.1 E(32554): 5.1e-26
Smith-Waterman score: 470; 34.1% identity (63.9% similar) in 302 aa overlap (195-483:177-466)
170 180 190 200 210 220
pF1KE5 LKQKKKMAVSAKLYGSGDQEAWQKGVLFASGQNLARQLMETPANEMTPTRFAEIIEKNLK
: :: ....:: :::. : : :.: :
CCDS46 KTVTVEFFLVGQDNGPVEVSTLQCLANATDGVRLAARIVDTPCNEMNTDTFLEEINKVGK
150 160 170 180 190 200
230 240 250 260 270 280
pF1KE5 SASSKTEVHIRPKSWIEEQAMGSFLSVAKGSDEPPVFLEIHYKGSPNANEPPLVFVGKGI
. . :: . .. ...:.. .:.:.. .::.. . . .:.. ...:::::
CCDS46 ELGIIPTI-IRDEE-LKTRGFGGIYGVGKAALHPPALAVLSH--TPDGATQTIAWVGKGI
210 220 230 240 250 260
290 300 310 320 330 340
pF1KE5 TFDSGGISIKASANMDLMRADMGGAATICSAIVSAAKLNLPINIIGLAPLCENMPSGKAN
..:.::.:::....: :. : ::::.. .:. .: : .. :. .. : :: . .:.
CCDS46 VYDTGGLSIKGKTTMPGMKRDCGGAAAVLGAFRAAIKQGFKDNLHAVFCLAENSVGPNAT
270 280 290 300 310 320
350 360 370 380 390 400
pF1KE5 KPGDVVRAKNGKTIQVDNTDAEGRLILADALCYA-HTFNPKVILNAATLTGAMDVALGSG
.: :. .:::....::::::::.:::.. :: . .. .::. ::::::. .: :.
CCDS46 RPDDIHLLYSGKTVEINNTDAEGRLVLADGVSYACKDLGADIILDMATLTGAQGIATGKY
330 340 350 360 370 380
410 420 430 440 450
pF1KE5 ATGVFTNSSWLWNKLFEASIETGDRVWRMPL-------FEHYTRQVVDCQ--LADVNNIG
..:.:::. .:. . :: : :: : ..: :.: . .:: .:
CCDS46 HAAVLTNSAEWEAACVKAGRKCGDLV--HPLVYCPELHFSEFTSAVADMKNSVADRDN--
390 400 410 420 430
460 470 480 490 500 510
pF1KE5 KYRSAGACTAAAFLKEFVTH--PK-WAHLDIAGVMTNKDEVPYLRKGMTGRPTRTLIEFL
: ..: :. :. . : :.:::::
CCDS46 ---SPSSC-AGLFIASHIGFDWPGVWVHLDIAAPVHAGERATGFGVALLLALFGRASEDP
440 450 460 470 480 490
pF1KE5 LRFSQDNA
CCDS46 LLNLVSPLGCEVDVEEGDLGRDSKRRRLV
500 510 520
519 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 05:39:15 2016 done: Tue Nov 8 05:39:15 2016
Total Scan time: 2.990 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]