Result of FASTA (omim) for
pFN21AE5657
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5657, 483 aa
1>>>pF1KE5657 483 - 483 aa - 483 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.3819+/-0.000409; mu= -1.5239+/- 0.026
mean_var=430.8353+/-85.293, 0's: 0 Z-trim(124.0): 362 B-trim: 188 in 1/61
Lambda= 0.061790
statistics sampled from 44321 (44743) to 44321 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.793), E-opt: 0.2 (0.525), width: 16
Scan time: 10.470
The best scores are: opt bits E(85289)
XP_016858302 (OMIM: 602010) PREDICTED: serine/argi ( 483) 3139 293.8 7e-79
NP_001177916 (OMIM: 602010) serine/arginine-rich s ( 483) 3139 293.8 7e-79
XP_016858301 (OMIM: 602010) PREDICTED: serine/argi ( 484) 3127 292.8 1.5e-78
XP_011540729 (OMIM: 602010) PREDICTED: serine/argi ( 484) 3127 292.8 1.5e-78
NP_004759 (OMIM: 602010) serine/arginine-rich spli ( 484) 3127 292.8 1.5e-78
XP_016858300 (OMIM: 602010) PREDICTED: serine/argi ( 490) 3115 291.7 3.1e-78
XP_005271396 (OMIM: 602010) PREDICTED: serine/argi ( 491) 3103 290.6 6.5e-78
XP_005271395 (OMIM: 602010) PREDICTED: serine/argi ( 491) 3103 290.6 6.5e-78
XP_016858304 (OMIM: 602010) PREDICTED: serine/argi ( 431) 2351 223.5 9.1e-58
XP_011540730 (OMIM: 602010) PREDICTED: serine/argi ( 431) 2351 223.5 9.1e-58
XP_011540733 (OMIM: 602010) PREDICTED: serine/argi ( 431) 2351 223.5 9.1e-58
XP_016858303 (OMIM: 602010) PREDICTED: serine/argi ( 431) 2351 223.5 9.1e-58
XP_016858323 (OMIM: 602010) PREDICTED: serine/argi ( 293) 1890 182.2 1.7e-45
XP_016858319 (OMIM: 602010) PREDICTED: serine/argi ( 293) 1890 182.2 1.7e-45
XP_016858320 (OMIM: 602010) PREDICTED: serine/argi ( 293) 1890 182.2 1.7e-45
XP_016858322 (OMIM: 602010) PREDICTED: serine/argi ( 293) 1890 182.2 1.7e-45
XP_016858321 (OMIM: 602010) PREDICTED: serine/argi ( 293) 1890 182.2 1.7e-45
XP_016858312 (OMIM: 602010) PREDICTED: serine/argi ( 294) 1878 181.2 3.5e-45
XP_016858316 (OMIM: 602010) PREDICTED: serine/argi ( 294) 1878 181.2 3.5e-45
XP_016858315 (OMIM: 602010) PREDICTED: serine/argi ( 294) 1878 181.2 3.5e-45
XP_016858317 (OMIM: 602010) PREDICTED: serine/argi ( 294) 1878 181.2 3.5e-45
XP_016858318 (OMIM: 602010) PREDICTED: serine/argi ( 294) 1878 181.2 3.5e-45
XP_016858311 (OMIM: 602010) PREDICTED: serine/argi ( 294) 1878 181.2 3.5e-45
XP_016858313 (OMIM: 602010) PREDICTED: serine/argi ( 294) 1878 181.2 3.5e-45
XP_016858314 (OMIM: 602010) PREDICTED: serine/argi ( 294) 1878 181.2 3.5e-45
XP_016858309 (OMIM: 602010) PREDICTED: serine/argi ( 300) 1866 180.1 7.5e-45
XP_016858310 (OMIM: 602010) PREDICTED: serine/argi ( 300) 1866 180.1 7.5e-45
XP_016858306 (OMIM: 602010) PREDICTED: serine/argi ( 301) 1854 179.0 1.6e-44
XP_016858307 (OMIM: 602010) PREDICTED: serine/argi ( 301) 1854 179.0 1.6e-44
XP_016858305 (OMIM: 602010) PREDICTED: serine/argi ( 301) 1854 179.0 1.6e-44
XP_016858308 (OMIM: 602010) PREDICTED: serine/argi ( 301) 1854 179.0 1.6e-44
NP_001310462 (OMIM: 609268) splicing regulatory gl ( 538) 858 90.6 1.2e-17
NP_001310458 (OMIM: 609268) splicing regulatory gl ( 623) 858 90.6 1.3e-17
NP_001070667 (OMIM: 609268) splicing regulatory gl ( 624) 858 90.6 1.3e-17
XP_016864544 (OMIM: 609268) PREDICTED: splicing re ( 503) 809 86.2 2.4e-16
NP_001257421 (OMIM: 609268) splicing regulatory gl ( 507) 499 58.5 5.1e-08
NP_001310464 (OMIM: 609268) splicing regulatory gl ( 358) 491 57.6 6.6e-08
NP_631907 (OMIM: 609268) splicing regulatory gluta ( 508) 487 57.5 1.1e-07
NP_001310456 (OMIM: 609268) splicing regulatory gl ( 508) 487 57.5 1.1e-07
XP_011541473 (OMIM: 609268) PREDICTED: splicing re ( 508) 487 57.5 1.1e-07
XP_016864545 (OMIM: 609268) PREDICTED: splicing re ( 359) 479 56.6 1.4e-07
NP_001310463 (OMIM: 609268) splicing regulatory gl ( 359) 479 56.6 1.4e-07
NP_005617 (OMIM: 601940) serine/arginine-rich spli ( 494) 369 46.9 0.00015
NP_004809 (OMIM: 612172) probable ATP-dependent RN ( 820) 346 45.1 0.00088
NP_001278340 (OMIM: 182465,617140) protein SON iso (2108) 350 46.0 0.0013
NP_115571 (OMIM: 182465,617140) protein SON isofor (2303) 350 46.0 0.0013
NP_620305 (OMIM: 182465,617140) protein SON isofor (2426) 350 46.0 0.0014
NP_006266 (OMIM: 601944) serine/arginine-rich spli ( 344) 318 42.2 0.0028
NP_067062 (OMIM: 612427) RNA-binding protein 25 [H ( 843) 321 42.9 0.0042
XP_011535346 (OMIM: 612427) PREDICTED: RNA-binding ( 843) 321 42.9 0.0042
>>XP_016858302 (OMIM: 602010) PREDICTED: serine/arginine (483 aa)
initn: 3139 init1: 3139 opt: 3139 Z-score: 1537.1 bits: 293.8 E(85289): 7e-79
Smith-Waterman score: 3139; 100.0% identity (100.0% similar) in 483 aa overlap (1-483:1-483)
10 20 30 40 50 60
pF1KE5 MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKID
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 ELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 PKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 TRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDMD
430 440 450 460 470 480
pF1KE5 MSD
:::
XP_016 MSD
>>NP_001177916 (OMIM: 602010) serine/arginine-rich splic (483 aa)
initn: 3139 init1: 3139 opt: 3139 Z-score: 1537.1 bits: 293.8 E(85289): 7e-79
Smith-Waterman score: 3139; 100.0% identity (100.0% similar) in 483 aa overlap (1-483:1-483)
10 20 30 40 50 60
pF1KE5 MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKID
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 ELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 PKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 TRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDMD
430 440 450 460 470 480
pF1KE5 MSD
:::
NP_001 MSD
>>XP_016858301 (OMIM: 602010) PREDICTED: serine/arginine (484 aa)
initn: 3153 init1: 2713 opt: 3127 Z-score: 1531.4 bits: 292.8 E(85289): 1.5e-78
Smith-Waterman score: 3127; 99.8% identity (99.8% similar) in 484 aa overlap (1-483:1-484)
10 20 30 40 50 60
pF1KE5 MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKID
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 ELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRS
310 320 330 340 350 360
370 380 390 400 410
pF1KE5 PKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVK-
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKQ
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE5 VTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDM
430 440 450 460 470 480
480
pF1KE5 DMSD
::::
XP_016 DMSD
>>XP_011540729 (OMIM: 602010) PREDICTED: serine/arginine (484 aa)
initn: 3153 init1: 2713 opt: 3127 Z-score: 1531.4 bits: 292.8 E(85289): 1.5e-78
Smith-Waterman score: 3127; 99.8% identity (99.8% similar) in 484 aa overlap (1-483:1-484)
10 20 30 40 50 60
pF1KE5 MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKID
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 ELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRS
310 320 330 340 350 360
370 380 390 400 410
pF1KE5 PKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVK-
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKQ
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE5 VTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDM
430 440 450 460 470 480
480
pF1KE5 DMSD
::::
XP_011 DMSD
>>NP_004759 (OMIM: 602010) serine/arginine-rich splicing (484 aa)
initn: 3153 init1: 2713 opt: 3127 Z-score: 1531.4 bits: 292.8 E(85289): 1.5e-78
Smith-Waterman score: 3127; 99.8% identity (99.8% similar) in 484 aa overlap (1-483:1-484)
10 20 30 40 50 60
pF1KE5 MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKID
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 ELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 SLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRS
310 320 330 340 350 360
370 380 390 400 410
pF1KE5 PKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVK-
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 PKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKQ
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE5 VTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 VTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDM
430 440 450 460 470 480
480
pF1KE5 DMSD
::::
NP_004 DMSD
>>XP_016858300 (OMIM: 602010) PREDICTED: serine/arginine (490 aa)
initn: 2228 init1: 2228 opt: 3115 Z-score: 1525.5 bits: 291.7 E(85289): 3.1e-78
Smith-Waterman score: 3115; 98.6% identity (98.6% similar) in 490 aa overlap (1-483:1-490)
10 20 30 40 50 60
pF1KE5 MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKID
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 ELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER
250 260 270 280 290 300
310 320 330 340 350
pF1KE5 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSAS-------RERRRRRSRSGTR
:::::::::::::::::::::::::::::::::::::::: :::::::::::::
XP_016 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASSLHICDSRERRRRRSRSGTR
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE5 SPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSE
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE5 SDKDVKVTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDKDVKVTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDD
430 440 450 460 470 480
480
pF1KE5 HHEEDMDMSD
::::::::::
XP_016 HHEEDMDMSD
490
>>XP_005271396 (OMIM: 602010) PREDICTED: serine/arginine (491 aa)
initn: 3635 init1: 2228 opt: 3103 Z-score: 1519.7 bits: 290.6 E(85289): 6.5e-78
Smith-Waterman score: 3103; 98.4% identity (98.4% similar) in 491 aa overlap (1-483:1-491)
10 20 30 40 50 60
pF1KE5 MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKID
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 ELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER
250 260 270 280 290 300
310 320 330 340 350
pF1KE5 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSAS-------RERRRRRSRSGTR
:::::::::::::::::::::::::::::::::::::::: :::::::::::::
XP_005 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASSLHICDSRERRRRRSRSGTR
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE5 SPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSE
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE5 SDKDVK-VTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGD
:::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SDKDVKQVTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGD
430 440 450 460 470 480
480
pF1KE5 DHHEEDMDMSD
:::::::::::
XP_005 DHHEEDMDMSD
490
>>XP_005271395 (OMIM: 602010) PREDICTED: serine/arginine (491 aa)
initn: 3635 init1: 2228 opt: 3103 Z-score: 1519.7 bits: 290.6 E(85289): 6.5e-78
Smith-Waterman score: 3103; 98.4% identity (98.4% similar) in 491 aa overlap (1-483:1-491)
10 20 30 40 50 60
pF1KE5 MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKID
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 ELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER
250 260 270 280 290 300
310 320 330 340 350
pF1KE5 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSAS-------RERRRRRSRSGTR
:::::::::::::::::::::::::::::::::::::::: :::::::::::::
XP_005 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASSLHICDSRERRRRRSRSGTR
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE5 SPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSE
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE5 SDKDVK-VTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGD
:::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SDKDVKQVTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGD
430 440 450 460 470 480
480
pF1KE5 DHHEEDMDMSD
:::::::::::
XP_005 DHHEEDMDMSD
490
>>XP_016858304 (OMIM: 602010) PREDICTED: serine/arginine (431 aa)
initn: 2638 init1: 1472 opt: 2351 Z-score: 1158.1 bits: 223.5 E(85289): 9.1e-58
Smith-Waterman score: 2351; 97.1% identity (97.6% similar) in 382 aa overlap (110-483:50-431)
80 90 100 110 120 130
pF1KE5 FVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGG
.. :::::::::::::::::::::::::::
XP_016 QTQVVYQGDIFWVFLCVFCLRKECVLMQGCFSAGVIPDEAKALSLLAPANAVAGLLPGGG
20 30 40 50 60 70
140 150 160 170 180 190
pF1KE5 LLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQSLAADQLLKLMSTVDPKLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQSLAADQLLKLMSTVDPKLN
80 90 100 110 120 130
200 210 220 230 240 250
pF1KE5 HVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPDKKEEKRRHSRSRSRSRRRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPDKKEEKRRHSRSRSRSRRRR
140 150 160 170 180 190
260 270 280 290 300 310
pF1KE5 TPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKE
200 210 220 230 240 250
320 330 340 350 360 370
pF1KE5 KKRSKTPPKSYSTARRSRSAS-------RERRRRRSRSGTRSPKKPRSPKRKLSRSPSPR
::::::::::::::::::::: ::::::::::::::::::::::::::::::::
XP_016 KKRSKTPPKSYSTARRSRSASSLHICDSRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPR
260 270 280 290 300 310
380 390 400 410 420 430
pF1KE5 RHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVK-VTRDYDEEEQGY
::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
XP_016 RHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKQVTRDYDEEEQGY
320 330 340 350 360 370
440 450 460 470 480
pF1KE5 DSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDMDMSD
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDMDMSD
380 390 400 410 420 430
>>XP_011540730 (OMIM: 602010) PREDICTED: serine/arginine (431 aa)
initn: 2638 init1: 1472 opt: 2351 Z-score: 1158.1 bits: 223.5 E(85289): 9.1e-58
Smith-Waterman score: 2351; 97.1% identity (97.6% similar) in 382 aa overlap (110-483:50-431)
80 90 100 110 120 130
pF1KE5 FVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGLLPGGG
.. :::::::::::::::::::::::::::
XP_011 QTQVVYQGDIFWVFLCVFCLRKECVLMQGCFSAGVIPDEAKALSLLAPANAVAGLLPGGG
20 30 40 50 60 70
140 150 160 170 180 190
pF1KE5 LLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQSLAADQLLKLMSTVDPKLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQSLAADQLLKLMSTVDPKLN
80 90 100 110 120 130
200 210 220 230 240 250
pF1KE5 HVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPDKKEEKRRHSRSRSRSRRRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPDKKEEKRRHSRSRSRSRRRR
140 150 160 170 180 190
260 270 280 290 300 310
pF1KE5 TPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKE
200 210 220 230 240 250
320 330 340 350 360 370
pF1KE5 KKRSKTPPKSYSTARRSRSAS-------RERRRRRSRSGTRSPKKPRSPKRKLSRSPSPR
::::::::::::::::::::: ::::::::::::::::::::::::::::::::
XP_011 KKRSKTPPKSYSTARRSRSASSLHICDSRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPR
260 270 280 290 300 310
380 390 400 410 420 430
pF1KE5 RHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVK-VTRDYDEEEQGY
::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
XP_011 RHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKQVTRDYDEEEQGY
320 330 340 350 360 370
440 450 460 470 480
pF1KE5 DSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDMDMSD
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDMDMSD
380 390 400 410 420 430
483 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 05:35:49 2016 done: Tue Nov 8 05:35:51 2016
Total Scan time: 10.470 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]