Result of FASTA (ccds) for
pFN21AE5650
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5650, 498 aa
1>>>pF1KE5650 498 - 498 aa - 498 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8840+/-0.000892; mu= 10.3300+/- 0.054
mean_var=93.1158+/-18.465, 0's: 0 Z-trim(108.6): 24 B-trim: 5 in 1/49
Lambda= 0.132911
statistics sampled from 10326 (10341) to 10326 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.684), E-opt: 0.2 (0.318), width: 16
Scan time: 2.570
The best scores are: opt bits E(32554)
CCDS31580.1 BEST1 gene_id:7439|Hs108|chr11 ( 585) 1845 364.0 2.5e-100
CCDS44623.1 BEST1 gene_id:7439|Hs108|chr11 ( 604) 1816 358.5 1.2e-98
CCDS61193.1 BEST3 gene_id:144453|Hs108|chr12 ( 398) 1109 222.9 5.3e-58
CCDS8992.2 BEST3 gene_id:144453|Hs108|chr12 ( 668) 1109 222.9 8.5e-58
CCDS42506.1 BEST2 gene_id:54831|Hs108|chr19 ( 509) 1060 213.5 4.5e-55
CCDS61192.1 BEST3 gene_id:144453|Hs108|chr12 ( 562) 838 170.9 3.2e-42
CCDS514.1 BEST4 gene_id:266675|Hs108|chr1 ( 473) 825 168.4 1.5e-41
CCDS41810.1 BEST3 gene_id:144453|Hs108|chr12 ( 455) 303 68.3 2e-11
>>CCDS31580.1 BEST1 gene_id:7439|Hs108|chr11 (585 aa)
initn: 1844 init1: 1844 opt: 1845 Z-score: 1914.8 bits: 364.0 E(32554): 2.5e-100
Smith-Waterman score: 3347; 94.9% identity (94.9% similar) in 525 aa overlap (1-498:61-585)
10 20 30
pF1KE5 MFEKLTLYCDSYIQLIPISFVLGFYVTLVV
::::::::::::::::::::::::::::::
CCDS31 LLYGEFLIFLLCYYIIRFIYRLALTEEQQLMFEKLTLYCDSYIQLIPISFVLGFYVTLVV
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE5 TRWWNQYENLPWPDRLMSLVSGFVEGKDEQGRLLRRTLIRYANLGNVLILRSVSTAVYKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TRWWNQYENLPWPDRLMSLVSGFVEGKDEQGRLLRRTLIRYANLGNVLILRSVSTAVYKR
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE5 FPSAQHLVQAGFMTPAEHKQLEKLSLPHNMFWVPWVWFANLSMKAWLGGRIRDPILLQSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 FPSAQHLVQAGFMTPAEHKQLEKLSLPHNMFWVPWVWFANLSMKAWLGGRIRDPILLQSL
160 170 180 190 200 210
160 170 180 190 200 210
pF1KE5 LNEMNTLRTQCGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPGHELD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LNEMNTLRTQCGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPGHELD
220 230 240 250 260 270
220 230 240
pF1KE5 LVVPVFTFLQFFFYVGWLKV---------------------------SLLAVDEMHQDLP
:::::::::::::::::::: :::::::::::::
CCDS31 LVVPVFTFLQFFFYVGWLKVAEQLINPFGEDDDDFETNWIVDRNLQVSLLAVDEMHQDLP
280 290 300 310 320 330
250 260 270 280 290 300
pF1KE5 RMEPDMYWNKPEPQPPYTAASAQFRRASFMGSTFNISLNKEEMEFQPNQEDEEDAHAGII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RMEPDMYWNKPEPQPPYTAASAQFRRASFMGSTFNISLNKEEMEFQPNQEDEEDAHAGII
340 350 360 370 380 390
310 320 330 340 350 360
pF1KE5 GRFLGLQSHDHHPPRANSRTKLLWPKRESLLHEGLPKNHKAAKQNVRGQEDNKAWKLKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GRFLGLQSHDHHPPRANSRTKLLWPKRESLLHEGLPKNHKAAKQNVRGQEDNKAWKLKAV
400 410 420 430 440 450
370 380 390 400 410 420
pF1KE5 DAFKSAPLYQRPGYYSAPQTPLSPTPMFFPLEPSAPSKLHSVTGIDTKDKSLKTVSSGAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DAFKSAPLYQRPGYYSAPQTPLSPTPMFFPLEPSAPSKLHSVTGIDTKDKSLKTVSSGAK
460 470 480 490 500 510
430 440 450 460 470 480
pF1KE5 KSFELLSESDGALMEHPEVSQVRRKTVEFNLTDMPEIPENHLKEPLEQSPTNIHTTLKDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KSFELLSESDGALMEHPEVSQVRRKTVEFNLTDMPEIPENHLKEPLEQSPTNIHTTLKDH
520 530 540 550 560 570
490
pF1KE5 MDPYWALENRDEAHS
:::::::::::::::
CCDS31 MDPYWALENRDEAHS
580
>>CCDS44623.1 BEST1 gene_id:7439|Hs108|chr11 (604 aa)
initn: 1810 init1: 1810 opt: 1816 Z-score: 1884.5 bits: 358.5 E(32554): 1.2e-98
Smith-Waterman score: 3318; 94.3% identity (94.5% similar) in 524 aa overlap (1-497:1-524)
10 20 30 40 50 60
pF1KE5 MFEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MFEKLTLYCDSYIQLIPISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDEQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 GRLLRRTLIRYANLGNVLILRSVSTAVYKRFPSAQHLVQAGFMTPAEHKQLEKLSLPHNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GRLLRRTLIRYANLGNVLILRSVSTAVYKRFPSAQHLVQAGFMTPAEHKQLEKLSLPHNM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 FWVPWVWFANLSMKAWLGGRIRDPILLQSLLNEMNTLRTQCGHLYAYDWISIPLVYTQVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 FWVPWVWFANLSMKAWLGGRIRDPILLQSLLNEMNTLRTQCGHLYAYDWISIPLVYTQVV
130 140 150 160 170 180
190 200 210 220 230
pF1KE5 TVAVYSFFLTCLVGRQFLNPAKAYPGHELDLVVPVFTFLQFFFYVGWLKV----------
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TVAVYSFFLTCLVGRQFLNPAKAYPGHELDLVVPVFTFLQFFFYVGWLKVAEQLINPFGE
190 200 210 220 230 240
240 250 260 270
pF1KE5 -----------------SLLAVDEMHQDLPRMEPDMYWNKPEPQPPYTAASAQFRRASFM
:::::::::::::::::::::::::::::::::::::::::::
CCDS44 DDDDFETNWIVDRNLQVSLLAVDEMHQDLPRMEPDMYWNKPEPQPPYTAASAQFRRASFM
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE5 GSTFNISLNKEEMEFQPNQEDEEDAHAGIIGRFLGLQSHDHHPPRANSRTKLLWPKRESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GSTFNISLNKEEMEFQPNQEDEEDAHAGIIGRFLGLQSHDHHPPRANSRTKLLWPKRESL
310 320 330 340 350 360
340 350 360 370 380 390
pF1KE5 LHEGLPKNHKAAKQNVRGQEDNKAWKLKAVDAFKSAPLYQRPGYYSAPQTPLSPTPMFFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LHEGLPKNHKAAKQNVRGQEDNKAWKLKAVDAFKSAPLYQRPGYYSAPQTPLSPTPMFFP
370 380 390 400 410 420
400 410 420 430 440 450
pF1KE5 LEPSAPSKLHSVTGIDTKDKSLKTVSSGAKKSFELLSESDGALMEHPEVSQVRRKTVEFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LEPSAPSKLHSVTGIDTKDKSLKTVSSGAKKSFELLSESDGALMEHPEVSQVRRKTVEFN
430 440 450 460 470 480
460 470 480 490
pF1KE5 LTDMPEIPENHLKEPLEQSPTNIHTTLKDHMDPYWALENRDEAHS
::::::::::::::::::::::::::::::::::::::::. :
CCDS44 LTDMPEIPENHLKEPLEQSPTNIHTTLKDHMDPYWALENRSVLHLNQGHCIALCPTPASL
490 500 510 520 530 540
CCDS44 ALSLPFLHNFLGFHHCQSTLDLRPALAWGIYLATFTGILGKCSGPFLTSPWYHPEDFLGP
550 560 570 580 590 600
>>CCDS61193.1 BEST3 gene_id:144453|Hs108|chr12 (398 aa)
initn: 1278 init1: 1102 opt: 1109 Z-score: 1154.8 bits: 222.9 E(32554): 5.3e-58
Smith-Waterman score: 1226; 55.9% identity (78.8% similar) in 320 aa overlap (2-294:62-379)
10 20 30
pF1KE5 MFEKLTLYCDSYIQLIPISFVLGFYVTLVVT
::::..::: : . ::..:::::::::::.
CCDS61 LYREFIVFAVLYTAISLVYRLLLTGVQKRYFEKLSIYCDRYAEQIPVTFVLGFYVTLVVN
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE5 RWWNQYENLPWPDRLMSLVSGFVEGKDEQGRLLRRTLIRYANLGNVLILRSVSTAVYKRF
:::::. ::::::::: :.:. :.:.::.::::::::.::.:: ..::.:::::::::::
CCDS61 RWWNQFVNLPWPDRLMFLISSSVHGSDEHGRLLRRTLMRYVNLTSLLIFRSVSTAVYKRF
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE5 PSAQHLVQAGFMTPAEHKQLEKLSLPHNMFWVPWVWFANLSMKAWLGGRIRDPILLQSLL
:. .:.:.::::: :.: ...:. :: .:::..::.::. :: ::::: . ::::.
CCDS61 PTMDHVVEAGFMTTDERKLFNHLKSPHLKYWVPFIWFGNLATKARNEGRIRDSVDLQSLM
160 170 180 190 200 210
160 170 180 190 200 210
pF1KE5 NEMNTLRTQCGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPGHELDL
.::: :. :. :..:::..::::::::::.:::.::..::.:::::.:.:.: ::.:::
CCDS61 TEMNRYRSWCSLLFGYDWVGIPLVYTQVVTLAVYTFFFACLIGRQFLDPTKGYAGHDLDL
220 230 240 250 260 270
220 230 240
pF1KE5 VVPVFTFLQFFFYVGWLKV---------------------------SLLAVDEMHQDLPR
.:.::.::::::.::::: :::::::::..::.
CCDS61 YIPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNWCIDRNLQVSLLAVDEMHMSLPK
280 290 300 310 320 330
250 260 270 280 290 300
pF1KE5 MEPDMYWNKPEPQPPYTAASAQFRRASFMGSTFNISLNKEEMEFQPNQEDEEDAHAGIIG
:. :.::. .:::: :.:.. ::.::: ....:. . . ..::
CCDS61 MKKDIYWDDSAARPPYTLAAADYCIPSFLGST--VQMGKQMPKNEWKMEDIKIPLPQPQF
340 350 360 370 380
310 320 330 340 350 360
pF1KE5 RFLGLQSHDHHPPRANSRTKLLWPKRESLLHEGLPKNHKAAKQNVRGQEDNKAWKLKAVD
CCDS61 QCAKSDPGG
390
>>CCDS8992.2 BEST3 gene_id:144453|Hs108|chr12 (668 aa)
initn: 1290 init1: 1108 opt: 1109 Z-score: 1151.1 bits: 222.9 E(32554): 8.5e-58
Smith-Waterman score: 1257; 53.0% identity (75.2% similar) in 355 aa overlap (2-324:62-416)
10 20 30
pF1KE5 MFEKLTLYCDSYIQLIPISFVLGFYVTLVVT
::::..::: : . ::..:::::::::::.
CCDS89 LYREFIVFAVLYTAISLVYRLLLTGVQKRYFEKLSIYCDRYAEQIPVTFVLGFYVTLVVN
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE5 RWWNQYENLPWPDRLMSLVSGFVEGKDEQGRLLRRTLIRYANLGNVLILRSVSTAVYKRF
:::::. ::::::::: :.:. :.:.::.::::::::.::.:: ..::.:::::::::::
CCDS89 RWWNQFVNLPWPDRLMFLISSSVHGSDEHGRLLRRTLMRYVNLTSLLIFRSVSTAVYKRF
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE5 PSAQHLVQAGFMTPAEHKQLEKLSLPHNMFWVPWVWFANLSMKAWLGGRIRDPILLQSLL
:. .:.:.::::: :.: ...:. :: .:::..::.::. :: ::::: . ::::.
CCDS89 PTMDHVVEAGFMTTDERKLFNHLKSPHLKYWVPFIWFGNLATKARNEGRIRDSVDLQSLM
160 170 180 190 200 210
160 170 180 190 200 210
pF1KE5 NEMNTLRTQCGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPGHELDL
.::: :. :. :..:::..::::::::::.:::.::..::.:::::.:.:.: ::.:::
CCDS89 TEMNRYRSWCSLLFGYDWVGIPLVYTQVVTLAVYTFFFACLIGRQFLDPTKGYAGHDLDL
220 230 240 250 260 270
220 230 240
pF1KE5 VVPVFTFLQFFFYVGWLKV---------------------------SLLAVDEMHQDLPR
.:.::.::::::.::::: :::::::::..::.
CCDS89 YIPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNWCIDRNLQVSLLAVDEMHMSLPK
280 290 300 310 320 330
250 260 270 280 290 300
pF1KE5 MEPDMYWNKPEPQPPYTAASAQFRRASFMGSTFNISLNKEEM---EFQPNQEDEEDAHAG
:. :.::. .:::: :.:.. ::.::: ...:. .. :. . : . :.
CCDS89 MKKDIYWDDSAARPPYTLAAADYCIPSFLGSTVQMGLSGSDFPDEEWLWDYEKHGHRHSM
340 350 360 370 380 390
310 320 330 340 350
pF1KE5 I--IGRFLGLQSHDHHPPRANSRTKLLWPKRESLLHEGLPKNHKAAKQNVRGQEDNKAWK
: . :::. . : : : . : .
CCDS89 IRRVKRFLSAHEHPSSPRRRSYRRQTSDSSMFLPRDDLSPARDLLDVPSRNPPRASPTWK
400 410 420 430 440 450
>>CCDS42506.1 BEST2 gene_id:54831|Hs108|chr19 (509 aa)
initn: 1151 init1: 1060 opt: 1060 Z-score: 1102.3 bits: 213.5 E(32554): 4.5e-55
Smith-Waterman score: 1220; 55.8% identity (76.7% similar) in 335 aa overlap (2-307:62-394)
10 20 30
pF1KE5 MFEKLTLYCDSYIQLIPISFVLGFYVTLVVT
::::..:::.: .:::.::::::::::::.
CCDS42 LWRELLCFLGFYMALSAAYRFVLTEGQKRYFEKLVIYCDQYASLIPVSFVLGFYVTLVVN
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE5 RWWNQYENLPWPDRLMSLVSGFVEGKDEQGRLLRRTLIRYANLGNVLILRSVSTAVYKRF
:::.:: .: :: :: .:.: :.:.:..::: ::::.:::.:. :::::::::::.:::
CCDS42 RWWSQYLCMPLPDALMCVVAGTVHGRDDRGRLYRRTLMRYAGLSAVLILRSVSTAVFKRF
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE5 PSAQHLVQAGFMTPAEHKQLEKLSLPHNMFWVPWVWFANLSMKAWLGGRIRDPILLQSLL
:. .:.:.::::: :.:..:.:. .: .::: :::.::. .: ::::: :. ::
CCDS42 PTIDHVVEAGFMTREERKKFENLNSSYNKYWVPCVWFSNLAAQARREGRIRDNSALKLLL
160 170 180 190 200 210
160 170 180 190 200 210
pF1KE5 NEMNTLRTQCGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPGHELDL
.:.:..: .:: :. :::::.:::::::::.:.::.::.::.:::::.::..: :.:::
CCDS42 EELNVFRGKCGMLFHYDWISVPLVYTQVVTIALYSYFLACLIGRQFLDPAQGYKDHDLDL
220 230 240 250 260 270
220 230 240
pF1KE5 VVPVFTFLQFFFYVGWLKV---------------------------SLLAVDEMHQDLPR
::.::.::::::.::::: :.::::::..::
CCDS42 CVPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNFLIDRNFQVSMLAVDEMYDDLAV
280 290 300 310 320 330
250 260 270 280 290 300
pF1KE5 MEPDMYWNKPEPQPPYTAASA-QFRRASFMGSTFNISLNKEEMEFQPNQEDEEDAHAG-I
.: :.::. : . :::::.. :.:. ::.::::.:.: ::.:.:: . : :. :
CCDS42 LEKDLYWDAAEARAPYTAATVFQLRQPSFQGSTFDITLAKEDMQFQ--RLDGLDGPMGEA
340 350 360 370 380
310 320 330 340 350 360
pF1KE5 IGRFLGLQSHDHHPPRANSRTKLLWPKRESLLHEGLPKNHKAAKQNVRGQEDNKAWKLKA
: ::
CCDS42 PGDFLQRLLPAGAGMVAGGPLGRRLSFLLRKNSCVSEASTGASCSCAVVPEGAAPECSCG
390 400 410 420 430 440
>>CCDS61192.1 BEST3 gene_id:144453|Hs108|chr12 (562 aa)
initn: 1019 init1: 837 opt: 838 Z-score: 871.5 bits: 170.9 E(32554): 3.2e-42
Smith-Waterman score: 986; 49.7% identity (72.9% similar) in 310 aa overlap (47-324:1-310)
20 30 40 50 60 70
pF1KE5 PISFVLGFYVTLVVTRWWNQYENLPWPDRLMSLVSGFVEGKDEQGRLLRRTLIRYANLGN
: :.:. :.:.::.::::::::.::.:: .
CCDS61 MFLISSSVHGSDEHGRLLRRTLMRYVNLTS
10 20 30
80 90 100 110 120 130
pF1KE5 VLILRSVSTAVYKRFPSAQHLVQAGFMTPAEHKQLEKLSLPHNMFWVPWVWFANLSMKAW
.::.::::::::::::. .:.:.::::: :.: ...:. :: .:::..::.::. ::
CCDS61 LLIFRSVSTAVYKRFPTMDHVVEAGFMTTDERKLFNHLKSPHLKYWVPFIWFGNLATKAR
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE5 LGGRIRDPILLQSLLNEMNTLRTQCGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQ
::::: . ::::..::: :. :. :..:::..::::::::::.:::.::..::.:::
CCDS61 NEGRIRDSVDLQSLMTEMNRYRSWCSLLFGYDWVGIPLVYTQVVTLAVYTFFFACLIGRQ
100 110 120 130 140 150
200 210 220 230
pF1KE5 FLNPAKAYPGHELDLVVPVFTFLQFFFYVGWLKV--------------------------
::.:.:.: ::.::: .:.::.::::::.:::::
CCDS61 FLDPTKGYAGHDLDLYIPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNWCIDRNLQ
160 170 180 190 200 210
240 250 260 270 280
pF1KE5 -SLLAVDEMHQDLPRMEPDMYWNKPEPQPPYTAASAQFRRASFMGSTFNISLNKEEM---
:::::::::..::.:. :.::. .:::: :.:.. ::.::: ...:. ..
CCDS61 VSLLAVDEMHMSLPKMKKDIYWDDSAARPPYTLAAADYCIPSFLGSTVQMGLSGSDFPDE
220 230 240 250 260 270
290 300 310 320 330 340
pF1KE5 EFQPNQEDEEDAHAGI--IGRFLGLQSHDHHPPRANSRTKLLWPKRESLLHEGLPKNHKA
:. . : . :. : . :::. . : : : . : .
CCDS61 EWLWDYEKHGHRHSMIRRVKRFLSAHEHPSSPRRRSYRRQTSDSSMFLPRDDLSPARDLL
280 290 300 310 320 330
350 360 370 380 390 400
pF1KE5 AKQNVRGQEDNKAWKLKAVDAFKSAPLYQRPGYYSAPQTPLSPTPMFFPLEPSAPSKLHS
CCDS61 DVPSRNPPRASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIK
340 350 360 370 380 390
>>CCDS514.1 BEST4 gene_id:266675|Hs108|chr1 (473 aa)
initn: 1144 init1: 825 opt: 825 Z-score: 859.3 bits: 168.4 E(32554): 1.5e-41
Smith-Waterman score: 1079; 49.7% identity (70.9% similar) in 358 aa overlap (1-309:61-418)
10 20 30
pF1KE5 MFEKLTLYCDSYIQLIPISFVLGFYVTLVV
.. ... ::. .:::.::::::::::::
CCDS51 LLYKEFLLFGALYAVLSITYRLLLTQEQRYVYAQVARYCNRSADLIPLSFVLGFYVTLVV
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE5 TRWWNQYENLPWPDRLMSLVSGFVEGKDEQGRLLRRTLIRYANLGNVLILRSVSTAVYKR
.:::.:: ..: ::.:: ..:. :.: :..::::::::::::::..::.:::::: : ::
CCDS51 NRWWSQYTSIPLPDQLMCVISASVHGVDQRGRLLRRTLIRYANLASVLVLRSVSTRVLKR
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE5 FPSAQHLVQAGFMTPAEHKQLEKLSLPHNMFWVPWVWFANLSMKAWLGGRIRDPILLQSL
::. .:.:.::::. :.:..:.:. : .::: :::.::. .: ::::: : : :
CCDS51 FPTMEHVVDAGFMSQEERKKFESLKSDFNKYWVPCVWFTNLAAQARRDGRIRDDIALCLL
160 170 180 190 200 210
160 170 180 190 200
pF1KE5 LNEMNTLRTQCGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNP----AKAY--
:.:.: :..:. :. :::::::::::::::.:::::: ::::::..: ::
CCDS51 LEELNKYRAKCSMLFHYDWISIPLVYTQVVTIAVYSFFALSLVGRQFVEPEAGAAKPQKL
220 230 240 250 260 270
210 220 230
pF1KE5 --PGHEL-------DLVVPVFTFLQFFFYVGWLKV-------------------------
::.: :. ::. :.::::::.:::::
CCDS51 LKPGQEPAPALGDPDMYVPLTTLLQFFFYAGWLKVAEQIINPFGEDDDDFETNQLIDRNL
280 290 300 310 320 330
240 250 260 270 280
pF1KE5 --SLLAVDEMHQDLPRMEPDMYWNKPEPQPPYTAASA-QFRRASFMGSTFNISLNKE---
:::.::::.:.:: : :.::.. .::::::.:.: . : ::.:::::. .. .
CCDS51 QVSLLSVDEMYQNLPPAEKDQYWDEDQPQPPYTVATAAESLRPSFLGSTFNLRMSDDPEQ
340 350 360 370 380 390
290 300 310 320 330 340
pF1KE5 --EMEFQPNQ-EDEEDAHAGIIGRFLGLQSHDHHPPRANSRTKLLWPKRESLLHEGLPKN
..: .:.. . :.. ..:::::.
CCDS51 SLQVEASPGSGRPAPAAQTPLLGRFLGVGAPSPAISLRNFGRVRGTPRPPHLLRFRAEEG
400 410 420 430 440 450
>>CCDS41810.1 BEST3 gene_id:144453|Hs108|chr12 (455 aa)
initn: 485 init1: 303 opt: 303 Z-score: 318.6 bits: 68.3 E(32554): 2e-11
Smith-Waterman score: 479; 38.4% identity (61.6% similar) in 232 aa overlap (103-324:1-203)
80 90 100 110 120 130
pF1KE5 NLGNVLILRSVSTAVYKRFPSAQHLVQAGFMTPAEHKQLEKLSLPHNMFWVPWVWFANLS
:: :.: ...:. :: .:::..::.::.
CCDS41 MTTDERKLFNHLKSPHLKYWVPFIWFGNLA
10 20 30
140 150 160 170 180 190
pF1KE5 MKAWLGGRIRDPILLQSLLNEMNTLRTQCGHLYAYDWISIPLVYTQVVTVAVYSFFLTCL
:: ::::: . ::::..::: :. :. :..:::..::::::::.
CCDS41 TKARNEGRIRDSVDLQSLMTEMNRYRSWCSLLFGYDWVGIPLVYTQVA------------
40 50 60 70
200 210 220 230 240
pF1KE5 VGRQFLNPAKAYPGHELDLVVPVFTFLQFFFYVGW-----LKVSLLAVDEMHQDLPRMEP
.:..:: :.. : : ..: :.::::::::::..::.:.
CCDS41 --EQLINPF----GEDDDD-----------FETNWCIDRNLQVSLLAVDEMHMSLPKMKK
80 90 100 110 120
250 260 270 280 290 300
pF1KE5 DMYWNKPEPQPPYTAASAQFRRASFMGSTFNISLNKEEM---EFQPNQEDEEDAHAGI--
:.::. .:::: :.:.. ::.::: ...:. .. :. . : . :. :
CCDS41 DIYWDDSAARPPYTLAAADYCIPSFLGSTVQMGLSGSDFPDEEWLWDYEKHGHRHSMIRR
130 140 150 160 170 180
310 320 330 340 350 360
pF1KE5 IGRFLGLQSHDHHPPRANSRTKLLWPKRESLLHEGLPKNHKAAKQNVRGQEDNKAWKLKA
. :::. . : : : . : .
CCDS41 VKRFLSAHEHPSSPRRRSYRRQTSDSSMFLPRDDLSPARDLLDVPSRNPPRASPTWKKSC
190 200 210 220 230 240
498 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 05:33:23 2016 done: Tue Nov 8 05:33:23 2016
Total Scan time: 2.570 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]