Result of FASTA (ccds) for
pFN21AE5625
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5625, 493 aa
1>>>pF1KE5625 493 - 493 aa - 493 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0232+/-0.000925; mu= 14.9819+/- 0.056
mean_var=80.6599+/-15.576, 0's: 0 Z-trim(106.7): 12 B-trim: 0 in 0/50
Lambda= 0.142806
statistics sampled from 9124 (9132) to 9124 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.658), E-opt: 0.2 (0.281), width: 16
Scan time: 3.280
The best scores are: opt bits E(32554)
CCDS10859.1 DUS2 gene_id:54920|Hs108|chr16 ( 493) 3260 681.4 5.9e-196
CCDS61970.1 DUS2 gene_id:54920|Hs108|chr16 ( 458) 2455 515.6 4.7e-146
CCDS5745.1 DUS4L gene_id:11062|Hs108|chr7 ( 317) 386 89.2 7.1e-18
CCDS32775.1 DUS1L gene_id:64118|Hs108|chr17 ( 473) 340 79.8 7.1e-15
>>CCDS10859.1 DUS2 gene_id:54920|Hs108|chr16 (493 aa)
initn: 3260 init1: 3260 opt: 3260 Z-score: 3631.5 bits: 681.4 E(32554): 5.9e-196
Smith-Waterman score: 3260; 100.0% identity (100.0% similar) in 493 aa overlap (1-493:1-493)
10 20 30 40 50 60
pF1KE5 MILNSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MILNSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 STVDFVAPDDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 STVDFVAPDDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 STKGGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 STKGGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 AVHGRKREERPQHPVSCEVIKAIADTLSIPVIANGGSHDHIQQYSDIEDFRQATAASSVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AVHGRKREERPQHPVSCEVIKAIADTLSIPVIANGGSHDHIQQYSDIEDFRQATAASSVM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 VARAAMWNPSIFLKEGLRPLEEVMQKYIRYAVQYDNHYTNTKYCLCQMLREQLESPQGRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 VARAAMWNPSIFLKEGLRPLEEVMQKYIRYAVQYDNHYTNTKYCLCQMLREQLESPQGRL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 LHAAQSSREICEAFGLGAFYEETTQELDAQQARLSAKTSEQTGEPAEDTSGVIKMAVKFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LHAAQSSREICEAFGLGAFYEETTQELDAQQARLSAKTSEQTGEPAEDTSGVIKMAVKFD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 RRAYPAQITPKMCLLEWCRREKLAQPVYETVQRPLDRLFSSIVTVAEQKYQSTLWDKSKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RRAYPAQITPKMCLLEWCRREKLAQPVYETVQRPLDRLFSSIVTVAEQKYQSTLWDKSKK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 LAEQAAAIVCLRSQGLPEGRLGEESPSLHKRKREAPDQDPGGPRAQELAQPGDLCKKPFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LAEQAAAIVCLRSQGLPEGRLGEESPSLHKRKREAPDQDPGGPRAQELAQPGDLCKKPFV
430 440 450 460 470 480
490
pF1KE5 ALGSGEESPLEGW
:::::::::::::
CCDS10 ALGSGEESPLEGW
490
>>CCDS61970.1 DUS2 gene_id:54920|Hs108|chr16 (458 aa)
initn: 2455 init1: 2455 opt: 2455 Z-score: 2735.7 bits: 515.6 E(32554): 4.7e-146
Smith-Waterman score: 2955; 92.9% identity (92.9% similar) in 493 aa overlap (1-493:1-458)
10 20 30 40 50 60
pF1KE5 MILNSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 MILNSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 STVDFVAPDDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQY
::::::::::::::::::::::::::::
CCDS61 STVDFVAPDDRVVFRTCEREQNRVVFQM--------------------------------
70 80
130 140 150 160 170 180
pF1KE5 STKGGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 ---GGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAI
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE5 AVHGRKREERPQHPVSCEVIKAIADTLSIPVIANGGSHDHIQQYSDIEDFRQATAASSVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 AVHGRKREERPQHPVSCEVIKAIADTLSIPVIANGGSHDHIQQYSDIEDFRQATAASSVM
150 160 170 180 190 200
250 260 270 280 290 300
pF1KE5 VARAAMWNPSIFLKEGLRPLEEVMQKYIRYAVQYDNHYTNTKYCLCQMLREQLESPQGRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 VARAAMWNPSIFLKEGLRPLEEVMQKYIRYAVQYDNHYTNTKYCLCQMLREQLESPQGRL
210 220 230 240 250 260
310 320 330 340 350 360
pF1KE5 LHAAQSSREICEAFGLGAFYEETTQELDAQQARLSAKTSEQTGEPAEDTSGVIKMAVKFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 LHAAQSSREICEAFGLGAFYEETTQELDAQQARLSAKTSEQTGEPAEDTSGVIKMAVKFD
270 280 290 300 310 320
370 380 390 400 410 420
pF1KE5 RRAYPAQITPKMCLLEWCRREKLAQPVYETVQRPLDRLFSSIVTVAEQKYQSTLWDKSKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 RRAYPAQITPKMCLLEWCRREKLAQPVYETVQRPLDRLFSSIVTVAEQKYQSTLWDKSKK
330 340 350 360 370 380
430 440 450 460 470 480
pF1KE5 LAEQAAAIVCLRSQGLPEGRLGEESPSLHKRKREAPDQDPGGPRAQELAQPGDLCKKPFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 LAEQAAAIVCLRSQGLPEGRLGEESPSLHKRKREAPDQDPGGPRAQELAQPGDLCKKPFV
390 400 410 420 430 440
490
pF1KE5 ALGSGEESPLEGW
:::::::::::::
CCDS61 ALGSGEESPLEGW
450
>>CCDS5745.1 DUS4L gene_id:11062|Hs108|chr7 (317 aa)
initn: 322 init1: 119 opt: 386 Z-score: 434.4 bits: 89.2 E(32554): 7.1e-18
Smith-Waterman score: 413; 28.8% identity (59.2% similar) in 299 aa overlap (15-310:30-307)
10 20 30 40
pF1KE5 MILNSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELI
. ::::: . : .: :. :. :. : ..
CCDS57 MKSDCMQTTICQERKKDPIEMFHSGQLVKVCAPMVRYSKLAFRTLVRKYSCDLCYTPMIV
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE5 DLKMIQCKRVVNEVLSTVDFVAPDDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVEN
... .. . ..: . : .. :....::. .::.:
CCDS57 AADFVKSIKARDSEFTTNQGDCP---------------LIVQFAANDARLLSDAARIVCP
70 80 90 100
110 120 130 140 150 160
pF1KE5 DVAGIDVNMGCPKQYSTKGGMGAALLSDPDKIEKILSTLVKGTRRP---VTCKIRILPSL
. :::.: :::.... :.:: :.. :. .. ... . . .. : :. :::: .:
CCDS57 YANGIDINCGCPQRWAMAEGYGACLINKPELVQDMVKQVRNQVETPGFSVSIKIRIHDDL
110 120 130 140 150 160
170 180 190 200 210 220
pF1KE5 EDTLSLVKRIERTGIAAIAVHGRKREERPQHPVSCEVIKAIADTLSIPVIANGGSHDHIQ
. :..: .. : ::.. :.:::: ::: : :: . :: : ...:::::::: :.
CCDS57 KRTVDLCQKAEATGVSWITVHGRTAEERHQ-PVHYDSIKIIKENMSIPVIANGD----IR
170 180 190 200 210 220
230 240 250 260 270 280
pF1KE5 QYSDIEDFRQATAASSVMVARAAMWNPSIFLKEGLRPLEEVMQKYIRYAVQYDNHYTNTK
. .. :. . :....:::::. . ::..: ::. . . .. :.. . : .
CCDS57 SLKEAENVWRITGTDGVMVARGLLANPAMFAGYEETPLKCIWD-WVDIALELGTPYMCFH
230 240 250 260 270
290 300 310 320 330 340
pF1KE5 YCLCQMLREQLESPQGRLLHAAQSSREICEAFGLGAFYEETTQELDAQQARLSAKTSEQT
: :... . :...: .:. :
CCDS57 QHLMYMMEKITSRQEKRVFNALSSTSAIIDYLTDHYGI
280 290 300 310
>>CCDS32775.1 DUS1L gene_id:64118|Hs108|chr17 (473 aa)
initn: 353 init1: 207 opt: 340 Z-score: 380.5 bits: 79.8 E(32554): 7.1e-15
Smith-Waterman score: 373; 27.8% identity (56.5% similar) in 338 aa overlap (15-348:20-327)
10 20 30 40 50
pF1KE5 MILNSLSLCYHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRV
..:::: . : :::. .::.. : : ...
CCDS32 MPKLQGFEFWSRTLRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 VNEVLSTVDFVAPDDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMG
.: : : :.:: . . :. ..: : . .: :... .::.:.:
CCDS32 RKENLYCE--VCPEDRPL-----------IVQFCANDPEVFVQAALLAQDYCDAIDLNLG
70 80 90 100
120 130 140 150 160 170
pF1KE5 CPKQYSTKGGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERT
::.. . .: .:: : .. : ..... . :::::::..: .. :. .. .:..
CCDS32 CPQMIAKRGHYGAFLQDEWDLLQRMILLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKA
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE5 GIAAIAVHGRKREER-P-QHPVSCEVIKAIADTLSIPVIANGGSHDHIQQYSDIEDFRQA
: ..:::: .:.. : . .: : :::. ...:::.::: .:: .:.: .
CCDS32 GCQLLTVHGRTKEQKGPLSGAASWEHIKAVRKAVAIPVFANG----NIQCLQDVERCLRD
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE5 TAASSVMVARAAMWNPSIFLKEGLRP-LEEVMQKYIRYAVQYDNHYTNTKYCLCQMLREQ
:....:: :.. . ::..: :: : . :. ..:. . .. : ...: .
CCDS32 TGVQGVMSAEGNLHNPALF--EGRSPAVWELAEEYLDIVREHP--------CPLSYVRAH
230 240 250 260 270
300 310 320 330 340 350
pF1KE5 LESPQGRLLHAAQSSREICEAFGLGAFYEETTQELDAQQARLSAKTSEQTG-EPAEDTSG
: . . :.. : :: ..::: . : . . :.: : .:. :
CCDS32 LFKLWHHTLQVHQELREELAKVKTLEGIAAVSQEL---KLRCQEEISRQEGAKPTGDLPF
280 290 300 310 320 330
360 370 380 390 400 410
pF1KE5 VIKMAVKFDRRAYPAQITPKMCLLEWCRREKLAQPVYETVQRPLDRLFSSIVTVAEQKYQ
CCDS32 HWICQPYIRPGPREGSKEKAGARSKRALEEEEGGTEVLSKNKQKKQLRNPHKTFDPSLKP
340 350 360 370 380 390
493 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 05:17:37 2016 done: Tue Nov 8 05:17:38 2016
Total Scan time: 3.280 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]