Result of FASTA (ccds) for
pFN21AE5563
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5563, 412 aa
1>>>pF1KE5563 412 - 412 aa - 412 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0356+/-0.00102; mu= 13.7699+/- 0.062
mean_var=87.6325+/-17.194, 0's: 0 Z-trim(105.9): 108 B-trim: 0 in 0/51
Lambda= 0.137007
statistics sampled from 8559 (8674) to 8559 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.641), E-opt: 0.2 (0.266), width: 16
Scan time: 2.290
The best scores are: opt bits E(32554)
CCDS44945.1 PTPRR gene_id:5801|Hs108|chr12 ( 412) 2744 552.6 2.5e-157
CCDS55847.1 PTPRR gene_id:5801|Hs108|chr12 ( 451) 2744 552.6 2.7e-157
CCDS55848.1 PTPRR gene_id:5801|Hs108|chr12 ( 545) 2744 552.7 3.1e-157
CCDS8998.1 PTPRR gene_id:5801|Hs108|chr12 ( 657) 2744 552.7 3.7e-157
CCDS41626.1 PTPN5 gene_id:84867|Hs108|chr11 ( 533) 1362 279.5 5.3e-75
CCDS60746.1 PTPN5 gene_id:84867|Hs108|chr11 ( 541) 1362 279.5 5.3e-75
CCDS7845.1 PTPN5 gene_id:84867|Hs108|chr11 ( 565) 1362 279.5 5.5e-75
CCDS1422.1 PTPN7 gene_id:5778|Hs108|chr1 ( 399) 1293 265.8 5.3e-71
CCDS1423.2 PTPN7 gene_id:5778|Hs108|chr1 ( 465) 1293 265.8 6e-71
CCDS53754.1 PTPRO gene_id:5800|Hs108|chr12 ( 377) 636 135.9 6.2e-32
CCDS44837.1 PTPRO gene_id:5800|Hs108|chr12 ( 405) 636 135.9 6.6e-32
CCDS8674.1 PTPRO gene_id:5800|Hs108|chr12 (1188) 636 136.2 1.6e-31
CCDS8675.1 PTPRO gene_id:5800|Hs108|chr12 (1216) 636 136.2 1.6e-31
CCDS42874.1 PTPRT gene_id:11122|Hs108|chr20 (1441) 637 136.4 1.6e-31
CCDS68127.1 PTPRT gene_id:11122|Hs108|chr20 (1460) 637 136.4 1.7e-31
CCDS1398.2 PTPRC gene_id:5788|Hs108|chr1 (1145) 617 132.4 2.1e-30
CCDS1397.2 PTPRC gene_id:5788|Hs108|chr1 (1306) 617 132.5 2.4e-30
CCDS75517.1 PTPRK gene_id:5796|Hs108|chr6 (1439) 615 132.1 3.4e-30
CCDS5137.1 PTPRK gene_id:5796|Hs108|chr6 (1440) 615 132.1 3.4e-30
CCDS7945.1 PTPRJ gene_id:5795|Hs108|chr11 (1337) 604 129.9 1.4e-29
CCDS11840.1 PTPRM gene_id:5797|Hs108|chr18 (1452) 598 128.7 3.5e-29
CCDS58613.1 PTPRM gene_id:5797|Hs108|chr18 (1465) 598 128.7 3.5e-29
CCDS47473.1 PTPRK gene_id:5796|Hs108|chr6 (1446) 593 127.7 6.9e-29
CCDS78179.1 PTPRK gene_id:5796|Hs108|chr6 (1462) 593 127.7 6.9e-29
CCDS75813.1 PTPRD gene_id:5789|Hs108|chr9 (1496) 588 126.8 1.4e-28
CCDS55288.1 PTPRD gene_id:5789|Hs108|chr9 (1502) 588 126.8 1.4e-28
CCDS55289.1 PTPRD gene_id:5789|Hs108|chr9 (1505) 588 126.8 1.4e-28
CCDS6472.2 PTPRD gene_id:5789|Hs108|chr9 (1505) 588 126.8 1.4e-28
CCDS55290.1 PTPRD gene_id:5789|Hs108|chr9 (1506) 588 126.8 1.4e-28
CCDS43786.1 PTPRD gene_id:5789|Hs108|chr9 (1912) 588 126.8 1.7e-28
CCDS13039.1 PTPRA gene_id:5786|Hs108|chr20 ( 793) 582 125.4 1.9e-28
CCDS13038.1 PTPRA gene_id:5786|Hs108|chr20 ( 802) 582 125.4 1.9e-28
CCDS12139.1 PTPRS gene_id:5802|Hs108|chr19 (1501) 585 126.2 2.1e-28
CCDS74265.1 PTPRS gene_id:5802|Hs108|chr19 (1505) 585 126.2 2.1e-28
CCDS12140.1 PTPRS gene_id:5802|Hs108|chr19 (1910) 585 126.2 2.6e-28
CCDS45930.1 PTPRS gene_id:5802|Hs108|chr19 (1948) 585 126.2 2.6e-28
CCDS490.2 PTPRF gene_id:5792|Hs108|chr1 (1898) 582 125.6 3.9e-28
CCDS489.2 PTPRF gene_id:5792|Hs108|chr1 (1907) 582 125.6 3.9e-28
CCDS55846.1 PTPRB gene_id:5787|Hs108|chr12 (1907) 577 124.6 7.7e-28
CCDS55845.1 PTPRB gene_id:5787|Hs108|chr12 (1907) 577 124.6 7.7e-28
CCDS44944.1 PTPRB gene_id:5787|Hs108|chr12 (1997) 577 124.7 8e-28
CCDS81713.1 PTPRB gene_id:5787|Hs108|chr12 (2127) 577 124.7 8.4e-28
CCDS44943.1 PTPRB gene_id:5787|Hs108|chr12 (2215) 577 124.7 8.7e-28
CCDS7658.1 PTPRE gene_id:5791|Hs108|chr10 ( 642) 563 121.6 2.1e-27
CCDS7657.1 PTPRE gene_id:5791|Hs108|chr10 ( 700) 563 121.6 2.3e-27
CCDS335.1 PTPRU gene_id:10076|Hs108|chr1 (1436) 564 122.0 3.6e-27
CCDS334.1 PTPRU gene_id:10076|Hs108|chr1 (1446) 564 122.0 3.6e-27
CCDS53290.1 PTPRU gene_id:10076|Hs108|chr1 (1433) 562 121.6 4.8e-27
CCDS54321.1 PTPRH gene_id:5794|Hs108|chr19 ( 937) 548 118.7 2.3e-26
CCDS33110.1 PTPRH gene_id:5794|Hs108|chr19 (1115) 548 118.8 2.6e-26
>>CCDS44945.1 PTPRR gene_id:5801|Hs108|chr12 (412 aa)
initn: 2744 init1: 2744 opt: 2744 Z-score: 2938.0 bits: 552.6 E(32554): 2.5e-157
Smith-Waterman score: 2744; 99.8% identity (100.0% similar) in 412 aa overlap (1-412:1-412)
10 20 30 40 50 60
pF1KE5 MILYRLKERFQLSLRQDKEKNQEIHLSPITLQPALSEAKTVHSMVQPEQAPKVLNVVVDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MILYRLKERFQLSLRQDKEKNQEIHLSPITLQPALSEAKTVHSMVQPEQAPKVLNVVVDP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 QGRGAPEIRATTATSVCPSPFKMKPIGLQERRGSNVSLTLDMSSLGNIEPFVSIPTPREK
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QGRGAPEIKATTATSVCPSPFKMKPIGLQERRGSNVSLTLDMSSLGNIEPFVSIPTPREK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VAMEYLQSASRILTRSQLRDVVASSHLLQSEFMEIPMNFVDPKEIDIPRHGTKNRYKTIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VAMEYLQSASRILTRSQLRDVVASSHLLQSEFMEIPMNFVDPKEIDIPRHGTKNRYKTIL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 PNPLSRVCLRPKNVTDSLSTYINANYIRGYSGKEKAFIATQGPMINTVDDFWQMVWQEDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PNPLSRVCLRPKNVTDSLSTYINANYIRGYSGKEKAFIATQGPMINTVDDFWQMVWQEDS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 PVIVMITKLKEKNEKCVLYWPEKRGIYGKVEVLVISVNECDNYTIRNLVLKQGSHTQHVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PVIVMITKLKEKNEKCVLYWPEKRGIYGKVEVLVISVNECDNYTIRNLVLKQGSHTQHVK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 HYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASQGRGPVVVHCSAGIGRTGCFIATSIGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 HYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASQGRGPVVVHCSAGIGRTGCFIATSIGC
310 320 330 340 350 360
370 380 390 400 410
pF1KE5 QQLKEEGVVDALSIVCQLRMDRGGMVQTSEQYEFVHHALCLYESRLSAETVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QQLKEEGVVDALSIVCQLRMDRGGMVQTSEQYEFVHHALCLYESRLSAETVQ
370 380 390 400 410
>>CCDS55847.1 PTPRR gene_id:5801|Hs108|chr12 (451 aa)
initn: 2744 init1: 2744 opt: 2744 Z-score: 2937.4 bits: 552.6 E(32554): 2.7e-157
Smith-Waterman score: 2744; 99.8% identity (100.0% similar) in 412 aa overlap (1-412:40-451)
10 20 30
pF1KE5 MILYRLKERFQLSLRQDKEKNQEIHLSPIT
::::::::::::::::::::::::::::::
CCDS55 QHEADKIWSKEGFYAVVIFLSIFVIIVTCLMILYRLKERFQLSLRQDKEKNQEIHLSPIT
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE5 LQPALSEAKTVHSMVQPEQAPKVLNVVVDPQGRGAPEIRATTATSVCPSPFKMKPIGLQE
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS55 LQPALSEAKTVHSMVQPEQAPKVLNVVVDPQGRGAPEIKATTATSVCPSPFKMKPIGLQE
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE5 RRGSNVSLTLDMSSLGNIEPFVSIPTPREKVAMEYLQSASRILTRSQLRDVVASSHLLQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RRGSNVSLTLDMSSLGNIEPFVSIPTPREKVAMEYLQSASRILTRSQLRDVVASSHLLQS
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE5 EFMEIPMNFVDPKEIDIPRHGTKNRYKTILPNPLSRVCLRPKNVTDSLSTYINANYIRGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EFMEIPMNFVDPKEIDIPRHGTKNRYKTILPNPLSRVCLRPKNVTDSLSTYINANYIRGY
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE5 SGKEKAFIATQGPMINTVDDFWQMVWQEDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SGKEKAFIATQGPMINTVDDFWQMVWQEDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKV
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE5 EVLVISVNECDNYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EVLVISVNECDNYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDR
310 320 330 340 350 360
340 350 360 370 380 390
pF1KE5 LASQGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQTSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LASQGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQTSE
370 380 390 400 410 420
400 410
pF1KE5 QYEFVHHALCLYESRLSAETVQ
::::::::::::::::::::::
CCDS55 QYEFVHHALCLYESRLSAETVQ
430 440 450
>>CCDS55848.1 PTPRR gene_id:5801|Hs108|chr12 (545 aa)
initn: 2744 init1: 2744 opt: 2744 Z-score: 2936.2 bits: 552.7 E(32554): 3.1e-157
Smith-Waterman score: 2744; 99.8% identity (100.0% similar) in 412 aa overlap (1-412:134-545)
10 20 30
pF1KE5 MILYRLKERFQLSLRQDKEKNQEIHLSPIT
::::::::::::::::::::::::::::::
CCDS55 QHEADKIWSKEGFYAVVIFLSIFVIIVTCLMILYRLKERFQLSLRQDKEKNQEIHLSPIT
110 120 130 140 150 160
40 50 60 70 80 90
pF1KE5 LQPALSEAKTVHSMVQPEQAPKVLNVVVDPQGRGAPEIRATTATSVCPSPFKMKPIGLQE
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS55 LQPALSEAKTVHSMVQPEQAPKVLNVVVDPQGRGAPEIKATTATSVCPSPFKMKPIGLQE
170 180 190 200 210 220
100 110 120 130 140 150
pF1KE5 RRGSNVSLTLDMSSLGNIEPFVSIPTPREKVAMEYLQSASRILTRSQLRDVVASSHLLQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RRGSNVSLTLDMSSLGNIEPFVSIPTPREKVAMEYLQSASRILTRSQLRDVVASSHLLQS
230 240 250 260 270 280
160 170 180 190 200 210
pF1KE5 EFMEIPMNFVDPKEIDIPRHGTKNRYKTILPNPLSRVCLRPKNVTDSLSTYINANYIRGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EFMEIPMNFVDPKEIDIPRHGTKNRYKTILPNPLSRVCLRPKNVTDSLSTYINANYIRGY
290 300 310 320 330 340
220 230 240 250 260 270
pF1KE5 SGKEKAFIATQGPMINTVDDFWQMVWQEDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SGKEKAFIATQGPMINTVDDFWQMVWQEDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKV
350 360 370 380 390 400
280 290 300 310 320 330
pF1KE5 EVLVISVNECDNYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EVLVISVNECDNYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDR
410 420 430 440 450 460
340 350 360 370 380 390
pF1KE5 LASQGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQTSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LASQGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQTSE
470 480 490 500 510 520
400 410
pF1KE5 QYEFVHHALCLYESRLSAETVQ
::::::::::::::::::::::
CCDS55 QYEFVHHALCLYESRLSAETVQ
530 540
>>CCDS8998.1 PTPRR gene_id:5801|Hs108|chr12 (657 aa)
initn: 2744 init1: 2744 opt: 2744 Z-score: 2935.0 bits: 552.7 E(32554): 3.7e-157
Smith-Waterman score: 2744; 99.8% identity (100.0% similar) in 412 aa overlap (1-412:246-657)
10 20 30
pF1KE5 MILYRLKERFQLSLRQDKEKNQEIHLSPIT
::::::::::::::::::::::::::::::
CCDS89 QHEADKIWSKEGFYAVVIFLSIFVIIVTCLMILYRLKERFQLSLRQDKEKNQEIHLSPIT
220 230 240 250 260 270
40 50 60 70 80 90
pF1KE5 LQPALSEAKTVHSMVQPEQAPKVLNVVVDPQGRGAPEIRATTATSVCPSPFKMKPIGLQE
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS89 LQPALSEAKTVHSMVQPEQAPKVLNVVVDPQGRGAPEIKATTATSVCPSPFKMKPIGLQE
280 290 300 310 320 330
100 110 120 130 140 150
pF1KE5 RRGSNVSLTLDMSSLGNIEPFVSIPTPREKVAMEYLQSASRILTRSQLRDVVASSHLLQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 RRGSNVSLTLDMSSLGNIEPFVSIPTPREKVAMEYLQSASRILTRSQLRDVVASSHLLQS
340 350 360 370 380 390
160 170 180 190 200 210
pF1KE5 EFMEIPMNFVDPKEIDIPRHGTKNRYKTILPNPLSRVCLRPKNVTDSLSTYINANYIRGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 EFMEIPMNFVDPKEIDIPRHGTKNRYKTILPNPLSRVCLRPKNVTDSLSTYINANYIRGY
400 410 420 430 440 450
220 230 240 250 260 270
pF1KE5 SGKEKAFIATQGPMINTVDDFWQMVWQEDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 SGKEKAFIATQGPMINTVDDFWQMVWQEDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKV
460 470 480 490 500 510
280 290 300 310 320 330
pF1KE5 EVLVISVNECDNYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 EVLVISVNECDNYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDR
520 530 540 550 560 570
340 350 360 370 380 390
pF1KE5 LASQGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQTSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 LASQGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQTSE
580 590 600 610 620 630
400 410
pF1KE5 QYEFVHHALCLYESRLSAETVQ
::::::::::::::::::::::
CCDS89 QYEFVHHALCLYESRLSAETVQ
640 650
>>CCDS41626.1 PTPN5 gene_id:84867|Hs108|chr11 (533 aa)
initn: 1316 init1: 870 opt: 1362 Z-score: 1460.1 bits: 279.5 E(32554): 5.3e-75
Smith-Waterman score: 1362; 60.1% identity (80.2% similar) in 338 aa overlap (78-410:197-531)
50 60 70 80 90 100
pF1KE5 EQAPKVLNVVVDPQGRGAPEIRATTATSVCPSPFKMKPIGLQERRGSNVSLTLDMSSLG-
:. . .: .:::::::::::::::: . :
CCDS41 EKIEDDFLDLDPVPETPVFDCVMDIKPEADPTSLTVKSMGLQERRGSNVSLTLDMCTPGC
170 180 190 200 210 220
110 120 130 140 150 160
pF1KE5 NIEPFVSIPTPREKVAMEYLQSASRILTRSQLRDVVASSHLLQSEFMEIPMNFVDPKEID
: : : . .:::. : ::: ::::.: .:.. . . :::.::.::::::::::: :
CCDS41 NEEGFGYLMSPREESAREYLLSASRVLQAEELHEKALDPFLLQAEFFEIPMNFVDPKEYD
230 240 250 260 270 280
170 180 190 200 210 220
pF1KE5 IPRHGTKNRYKTILPNPLSRVCLRPKNVTDSLSTYINANYIRGYSGKEKAFIATQGPMIN
:: ::::::::::: ::::: . : ::.::::::::::.:.::..::::::...
CCDS41 IPGLVRKNRYKTILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVS
290 300 310 320 330 340
230 240 250 260 270 280
pF1KE5 TVDDFWQMVWQEDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKVEVLVISVNECDNYTIR
:: :::.::::: .:.:::::...: ::::. ::::.. : ::. : .: . ..: .:
CCDS41 TVADFWRMVWQEHTPIIVMITNIEEMNEKCTEYWPEEQVAYDGVEITVQKVIHTEDYRLR
350 360 370 380 390 400
290 300 310 320 330 340
pF1KE5 NLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASQGRGP----VVVH
. ::.:.. . .::::.:::::.:::: : :::.:. .::: :.: .:: ..::
CCDS41 LISLKSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEE---AAQQEGPHCAPIIVH
410 420 430 440 450 460
350 360 370 380 390 400
pF1KE5 CSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQTSEQYEFVHHALCLY
:::::::::::::::: ::::..::::: :. .::::.:::::.:: :::.::::.. ::
CCDS41 CSAGIGRTGCFIATSICCQQLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQFVHHVMSLY
470 480 490 500 510 520
410
pF1KE5 ESRLSAETVQ
:..:: ..
CCDS41 EKQLSHQSPE
530
>>CCDS60746.1 PTPN5 gene_id:84867|Hs108|chr11 (541 aa)
initn: 1316 init1: 870 opt: 1362 Z-score: 1460.0 bits: 279.5 E(32554): 5.3e-75
Smith-Waterman score: 1362; 60.1% identity (80.2% similar) in 338 aa overlap (78-410:205-539)
50 60 70 80 90 100
pF1KE5 EQAPKVLNVVVDPQGRGAPEIRATTATSVCPSPFKMKPIGLQERRGSNVSLTLDMSSLG-
:. . .: .:::::::::::::::: . :
CCDS60 EKIEDDFLDLDPVPETPVFDCVMDIKPEADPTSLTVKSMGLQERRGSNVSLTLDMCTPGC
180 190 200 210 220 230
110 120 130 140 150 160
pF1KE5 NIEPFVSIPTPREKVAMEYLQSASRILTRSQLRDVVASSHLLQSEFMEIPMNFVDPKEID
: : : . .:::. : ::: ::::.: .:.. . . :::.::.::::::::::: :
CCDS60 NEEGFGYLMSPREESAREYLLSASRVLQAEELHEKALDPFLLQAEFFEIPMNFVDPKEYD
240 250 260 270 280 290
170 180 190 200 210 220
pF1KE5 IPRHGTKNRYKTILPNPLSRVCLRPKNVTDSLSTYINANYIRGYSGKEKAFIATQGPMIN
:: ::::::::::: ::::: . : ::.::::::::::.:.::..::::::...
CCDS60 IPGLVRKNRYKTILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVS
300 310 320 330 340 350
230 240 250 260 270 280
pF1KE5 TVDDFWQMVWQEDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKVEVLVISVNECDNYTIR
:: :::.::::: .:.:::::...: ::::. ::::.. : ::. : .: . ..: .:
CCDS60 TVADFWRMVWQEHTPIIVMITNIEEMNEKCTEYWPEEQVAYDGVEITVQKVIHTEDYRLR
360 370 380 390 400 410
290 300 310 320 330 340
pF1KE5 NLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASQGRGP----VVVH
. ::.:.. . .::::.:::::.:::: : :::.:. .::: :.: .:: ..::
CCDS60 LISLKSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEE---AAQQEGPHCAPIIVH
420 430 440 450 460 470
350 360 370 380 390 400
pF1KE5 CSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQTSEQYEFVHHALCLY
:::::::::::::::: ::::..::::: :. .::::.:::::.:: :::.::::.. ::
CCDS60 CSAGIGRTGCFIATSICCQQLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQFVHHVMSLY
480 490 500 510 520 530
410
pF1KE5 ESRLSAETVQ
:..:: ..
CCDS60 EKQLSHQSPE
540
>>CCDS7845.1 PTPN5 gene_id:84867|Hs108|chr11 (565 aa)
initn: 1316 init1: 870 opt: 1362 Z-score: 1459.7 bits: 279.5 E(32554): 5.5e-75
Smith-Waterman score: 1362; 60.1% identity (80.2% similar) in 338 aa overlap (78-410:229-563)
50 60 70 80 90 100
pF1KE5 EQAPKVLNVVVDPQGRGAPEIRATTATSVCPSPFKMKPIGLQERRGSNVSLTLDMSSLG-
:. . .: .:::::::::::::::: . :
CCDS78 EKIEDDFLDLDPVPETPVFDCVMDIKPEADPTSLTVKSMGLQERRGSNVSLTLDMCTPGC
200 210 220 230 240 250
110 120 130 140 150 160
pF1KE5 NIEPFVSIPTPREKVAMEYLQSASRILTRSQLRDVVASSHLLQSEFMEIPMNFVDPKEID
: : : . .:::. : ::: ::::.: .:.. . . :::.::.::::::::::: :
CCDS78 NEEGFGYLMSPREESAREYLLSASRVLQAEELHEKALDPFLLQAEFFEIPMNFVDPKEYD
260 270 280 290 300 310
170 180 190 200 210 220
pF1KE5 IPRHGTKNRYKTILPNPLSRVCLRPKNVTDSLSTYINANYIRGYSGKEKAFIATQGPMIN
:: ::::::::::: ::::: . : ::.::::::::::.:.::..::::::...
CCDS78 IPGLVRKNRYKTILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVS
320 330 340 350 360 370
230 240 250 260 270 280
pF1KE5 TVDDFWQMVWQEDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKVEVLVISVNECDNYTIR
:: :::.::::: .:.:::::...: ::::. ::::.. : ::. : .: . ..: .:
CCDS78 TVADFWRMVWQEHTPIIVMITNIEEMNEKCTEYWPEEQVAYDGVEITVQKVIHTEDYRLR
380 390 400 410 420 430
290 300 310 320 330 340
pF1KE5 NLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASQGRGP----VVVH
. ::.:.. . .::::.:::::.:::: : :::.:. .::: :.: .:: ..::
CCDS78 LISLKSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEE---AAQQEGPHCAPIIVH
440 450 460 470 480 490
350 360 370 380 390 400
pF1KE5 CSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQTSEQYEFVHHALCLY
:::::::::::::::: ::::..::::: :. .::::.:::::.:: :::.::::.. ::
CCDS78 CSAGIGRTGCFIATSICCQQLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQFVHHVMSLY
500 510 520 530 540 550
410
pF1KE5 ESRLSAETVQ
:..:: ..
CCDS78 EKQLSHQSPE
560
>>CCDS1422.1 PTPN7 gene_id:5778|Hs108|chr1 (399 aa)
initn: 1138 init1: 910 opt: 1293 Z-score: 1388.2 bits: 265.8 E(32554): 5.3e-71
Smith-Waterman score: 1293; 52.5% identity (76.1% similar) in 373 aa overlap (44-409:27-396)
20 30 40 50 60 70
pF1KE5 LRQDKEKNQEIHLSPITLQPALSEAKTVHSMVQPEQAPKVLNVVVDPQG---RGAPEIRA
. .: .: .:. .: :. : .
CCDS14 MGASFWPIRQAREQQRRALSFRQTSWLSEPPLGPAPHLSMVQAHGGRSRAQPLTLS
10 20 30 40 50
80 90 100 110 120
pF1KE5 TTATSVCPSPFKM---KPIGLQERRGSNVSLTLDMSSLGNIEPFVSIPTPREKVAMEYLQ
:. . : : : : . :::::::::.: ::. ::: .::. :. :::: :....:.
CCDS14 LGAAMTQPPPEKTPAKKHVRLQERRGSNVALMLDVRSLGAVEPICSVNTPRE-VTLHFLR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE5 SASRILTRSQLRDVVASSHLLQSEFMEIPMNFVDPKEIDIPRHGTKNRYKTILPNPLSRV
.:.. ::: :. : . :. ::..:: :::.:...::: :..:.::::::::: :::
CCDS14 TAGHPLTRWALQRQPPSPKQLEEEFLKIPSNFVSPEDLDIPGHASKDRYKTILPNPQSRV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE5 CL-RPKNVTDSLSTYINANYIRGYSGKEKAFIATQGPMINTVDDFWQMVWQEDSPVIVMI
:: : .. :. ::::::::::.::::..::::::: :::.:::.:::::. .:::.
CCDS14 CLGRAQSQEDG--DYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQEEVSLIVML
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE5 TKLKEKNEKCVLYWPEKRGIYGKVEVLVISVNECDNYTIRNLVLKQGSHTQHVKHYWYTS
:.:.: .:::: ::: .. :: .. . ...:: .::.:.:... . . ::: ...
CCDS14 TQLREGKEKCVHYWPTEEETYGPFQIRIQDMKECPEYTVRQLTIQYQEERRSVKHILFSA
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE5 WPDHKTPDSAQPLLQLMLDVEEDRLASQGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEE
::::.::.:: :::.:. .:::. .. ::.::::::::::::::::: ::::::: .
CCDS14 WPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAGIGRTGCFIATRIGCQQLKAR
300 310 320 330 340 350
370 380 390 400 410
pF1KE5 GVVDALSIVCQLRMDRGGMVQTSEQYEFVHHALCLYESRLSAETVQ
: :: :.::::::.:::::.::.:::.:.::.: :: ..: :
CCDS14 GEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLALYAGQLPEEPSP
360 370 380 390
>>CCDS1423.2 PTPN7 gene_id:5778|Hs108|chr1 (465 aa)
initn: 1138 init1: 910 opt: 1293 Z-score: 1387.2 bits: 265.8 E(32554): 6e-71
Smith-Waterman score: 1293; 52.5% identity (76.1% similar) in 373 aa overlap (44-409:93-462)
20 30 40 50 60 70
pF1KE5 LRQDKEKNQEIHLSPITLQPALSEAKTVHSMVQPEQAPKVLNVVVDPQG---RGAPEIRA
. .: .: .:. .: :. : .
CCDS14 LLSPQRQTDRQTDSWQEAAWGPQLLQQTSWLSEPPLGPAPHLSMVQAHGGRSRAQPLTLS
70 80 90 100 110 120
80 90 100 110 120
pF1KE5 TTATSVCPSPFKM---KPIGLQERRGSNVSLTLDMSSLGNIEPFVSIPTPREKVAMEYLQ
:. . : : : : . :::::::::.: ::. ::: .::. :. :::: :....:.
CCDS14 LGAAMTQPPPEKTPAKKHVRLQERRGSNVALMLDVRSLGAVEPICSVNTPRE-VTLHFLR
130 140 150 160 170 180
130 140 150 160 170 180
pF1KE5 SASRILTRSQLRDVVASSHLLQSEFMEIPMNFVDPKEIDIPRHGTKNRYKTILPNPLSRV
.:.. ::: :. : . :. ::..:: :::.:...::: :..:.::::::::: :::
CCDS14 TAGHPLTRWALQRQPPSPKQLEEEFLKIPSNFVSPEDLDIPGHASKDRYKTILPNPQSRV
190 200 210 220 230 240
190 200 210 220 230 240
pF1KE5 CL-RPKNVTDSLSTYINANYIRGYSGKEKAFIATQGPMINTVDDFWQMVWQEDSPVIVMI
:: : .. :. ::::::::::.::::..::::::: :::.:::.:::::. .:::.
CCDS14 CLGRAQSQEDG--DYINANYIRGYDGKEKVYIATQGPMPNTVSDFWEMVWQEEVSLIVML
250 260 270 280 290
250 260 270 280 290 300
pF1KE5 TKLKEKNEKCVLYWPEKRGIYGKVEVLVISVNECDNYTIRNLVLKQGSHTQHVKHYWYTS
:.:.: .:::: ::: .. :: .. . ...:: .::.:.:... . . ::: ...
CCDS14 TQLREGKEKCVHYWPTEEETYGPFQIRIQDMKECPEYTVRQLTIQYQEERRSVKHILFSA
300 310 320 330 340 350
310 320 330 340 350 360
pF1KE5 WPDHKTPDSAQPLLQLMLDVEEDRLASQGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEE
::::.::.:: :::.:. .:::. .. ::.::::::::::::::::: ::::::: .
CCDS14 WPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAGIGRTGCFIATRIGCQQLKAR
360 370 380 390 400 410
370 380 390 400 410
pF1KE5 GVVDALSIVCQLRMDRGGMVQTSEQYEFVHHALCLYESRLSAETVQ
: :: :.::::::.:::::.::.:::.:.::.: :: ..: :
CCDS14 GEVDILGIVCQLRLDRGGMIQTAEQYQFLHHTLALYAGQLPEEPSP
420 430 440 450 460
>>CCDS53754.1 PTPRO gene_id:5800|Hs108|chr12 (377 aa)
initn: 530 init1: 337 opt: 636 Z-score: 686.8 bits: 135.9 E(32554): 6.2e-32
Smith-Waterman score: 636; 40.1% identity (70.6% similar) in 272 aa overlap (138-401:88-355)
110 120 130 140 150 160
pF1KE5 IEPFVSIPTPREKVAMEYLQSASRILTRSQLRDVVASS-HLLQSEFMEIPMNFVD-PK-E
..:.. .: . .. .: :. . .: :.
CCDS53 DGKLPYNWSKNGLKKRKLTNPVQLDDFDAYIKDMAKDSDYKFSLQFEELKLIGLDIPHFA
60 70 80 90 100 110
170 180 190 200 210 220
pF1KE5 IDIPRHGTKNRYKTILPNPLSRVCLRPKNVTDSLSTYINANYIRGYSGKEKAFIATQGPM
:.: . :::: .::: .::: : : .. . ::::::: ::.. .. .::::::.
CCDS53 ADLPLNRCKNRYTNILPYDFSRVRLVSMNEEEG-ADYINANYIPGYNSPQE-YIATQGPL
120 130 140 150 160 170
230 240 250 260 270 280
pF1KE5 INTVDDFWQMVWQEDSPVIVMITKLKEKNE-KCVLYWP--EKRGIYGKVEVLVISVNECD
.: .:::.:: :. : .:::.:. .:: . :: ::: :. :: . : .:: .: :
CCDS53 PETRNDFWKMVLQQKSQIIVMLTQCNEKRRVKCDHYWPFTEEPIAYGDITVEMISEEEQD
180 190 200 210 220 230
290 300 310 320 330
pF1KE5 NYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTP--DSAQPLLQLMLDVEEDRLASQGRGPV
... :.. .. ... : : :. ::.:::: .: ..:. .::.. :... :....::.
CCDS53 DWACRHFRINYADEMQDVMHFNYTAWPDHGVPTANAAESILQFVHMVRQQ--ATKSKGPM
240 250 260 270 280 290
340 350 360 370 380 390
pF1KE5 VVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQTSEQYEFVHHAL
..:::::.:::: ::: . :..... :: :..: ..: : .:::: ::: :.:. .
CCDS53 IIHCSAGVGRTGTFIALDRLLQHIRDHEFVDILGLVSEMRSYRMSMVQTEEQYIFIHQCV
300 310 320 330 340 350
400 410
pF1KE5 CLYESRLSAETVQ
:
CCDS53 QLMWMKKKQQFCISDVIYENVSKS
360 370
412 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 04:50:35 2016 done: Tue Nov 8 04:50:36 2016
Total Scan time: 2.290 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]