FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE5554, 429 aa
  1>>>pF1KE5554 429 - 429 aa - 429 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.7533+/-0.000776; mu= 8.4553+/- 0.047
 mean_var=158.1702+/-31.671, 0's: 0 Z-trim(114.1): 17  B-trim: 0 in 0/52
 Lambda= 0.101979
 statistics sampled from 14663 (14677) to 14663 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.772), E-opt: 0.2 (0.451), width:  16
 Scan time:  2.730

The best scores are:                                      opt bits E(32554)
CCDS13461.1 ZBP1 gene_id:81030|Hs108|chr20         ( 429) 2934 443.0 2.7e-124
CCDS54477.1 ZBP1 gene_id:81030|Hs108|chr20         ( 354) 2362 358.8   5e-99
CCDS54478.1 ZBP1 gene_id:81030|Hs108|chr20         ( 248) 1507 232.9 2.8e-61


>>CCDS13461.1 ZBP1 gene_id:81030|Hs108|chr20              (429 aa)
 initn: 2934 init1: 2934 opt: 2934  Z-score: 2345.0  bits: 443.0 E(32554): 2.7e-124
Smith-Waterman score: 2934; 99.5% identity (100.0% similar) in 429 aa overlap (1-429:1-429)

               10        20        30        40        50        60
pF1KE5 MAQAPADPGREGHLEQRILQVLTEAGSPVKLAQLVKECQAPKRELNQVLYRMKKELKVSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MAQAPADPGREGHLEQRILQVLTEAGSPVKLAQLVKECQAPKRELNQVLYRMKKELKVSL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 TSPATWCLGGTDPEGEGPAELALSSPAKRPQQHAATIPETPGPQFSQQREEDIYRFLKDN
       :::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS13 TSPATWCLGGTDPEGEGPAELALSSPAERPQQHAATIPETPGPQFSQQREEDIYRFLKDN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 GPQRALVIAQALGMRTAKDVNRDLYRMKSRHLLDMDEQSKAWTIYRPEDSGRRAKSASII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GPQRALVIAQALGMRTAKDVNRDLYRMKSRHLLDMDEQSKAWTIYRPEDSGRRAKSASII
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 YQHNPINMICQNGPNSWISIANSEAIQIGHGNIITRQTVSREDGSAGPRHLPSMAPGDSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 YQHNPINMICQNGPNSWISIANSEAIQIGHGNIITRQTVSREDGSAGPRHLPSMAPGDSS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE5 TWGTLVDPWGPQDIHMERSILRRVQLGHSNEMRLHGVPSEGPAHIPPGSPPVSATAAGPE
       :::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
CCDS13 TWGTLVDPWGPQDIHMEQSILRRVQLGHSNEMRLHGVPSEGPAHIPPGSPPVSATAAGPE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE5 ASFEARIPSPGTHPEGEAAQRIHMKSCFLEDATIGNSNKMSISPGVAGPGGVAGSGEGEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ASFEARIPSPGTHPEGEAAQRIHMKSCFLEDATIGNSNKMSISPGVAGPGGVAGSGEGEP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE5 GEDAGRRPADTQSRSHFPRDIGQPITPSHSKLTPKLETMTLGNRSHKAAEGSHYVDEASH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 GEDAGRRPADTQSRSHFPRDIGQPITPSHSKLTPKLETMTLGNRSHKAAEGSHYVDEASH
              370       380       390       400       410       420

                
pF1KE5 EGSWWGGGI
       :::::::::
CCDS13 EGSWWGGGI
                

>>CCDS54477.1 ZBP1 gene_id:81030|Hs108|chr20              (354 aa)
 initn: 2362 init1: 2362 opt: 2362  Z-score: 1891.4  bits: 358.8 E(32554): 5e-99
Smith-Waterman score: 2362; 99.4% identity (100.0% similar) in 343 aa overlap (87-429:12-354)

         60        70        80        90       100       110      
pF1KE5 KVSLTSPATWCLGGTDPEGEGPAELALSSPAKRPQQHAATIPETPGPQFSQQREEDIYRF
                                     :.::::::::::::::::::::::::::::
CCDS54                    MAQAPADPGREAERPQQHAATIPETPGPQFSQQREEDIYRF
                                  10        20        30        40 

        120       130       140       150       160       170      
pF1KE5 LKDNGPQRALVIAQALGMRTAKDVNRDLYRMKSRHLLDMDEQSKAWTIYRPEDSGRRAKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LKDNGPQRALVIAQALGMRTAKDVNRDLYRMKSRHLLDMDEQSKAWTIYRPEDSGRRAKS
              50        60        70        80        90       100 

        180       190       200       210       220       230      
pF1KE5 ASIIYQHNPINMICQNGPNSWISIANSEAIQIGHGNIITRQTVSREDGSAGPRHLPSMAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ASIIYQHNPINMICQNGPNSWISIANSEAIQIGHGNIITRQTVSREDGSAGPRHLPSMAP
             110       120       130       140       150       160 

        240       250       260       270       280       290      
pF1KE5 GDSSTWGTLVDPWGPQDIHMERSILRRVQLGHSNEMRLHGVPSEGPAHIPPGSPPVSATA
       :::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
CCDS54 GDSSTWGTLVDPWGPQDIHMEQSILRRVQLGHSNEMRLHGVPSEGPAHIPPGSPPVSATA
             170       180       190       200       210       220 

        300       310       320       330       340       350      
pF1KE5 AGPEASFEARIPSPGTHPEGEAAQRIHMKSCFLEDATIGNSNKMSISPGVAGPGGVAGSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 AGPEASFEARIPSPGTHPEGEAAQRIHMKSCFLEDATIGNSNKMSISPGVAGPGGVAGSG
             230       240       250       260       270       280 

        360       370       380       390       400       410      
pF1KE5 EGEPGEDAGRRPADTQSRSHFPRDIGQPITPSHSKLTPKLETMTLGNRSHKAAEGSHYVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 EGEPGEDAGRRPADTQSRSHFPRDIGQPITPSHSKLTPKLETMTLGNRSHKAAEGSHYVD
             290       300       310       320       330       340 

        420         
pF1KE5 EASHEGSWWGGGI
       :::::::::::::
CCDS54 EASHEGSWWGGGI
             350    

>>CCDS54478.1 ZBP1 gene_id:81030|Hs108|chr20              (248 aa)
 initn: 1532 init1: 1503 opt: 1507  Z-score: 1213.8  bits: 232.9 E(32554): 2.8e-61
Smith-Waterman score: 1507; 92.0% identity (94.4% similar) in 250 aa overlap (1-250:1-244)

               10        20        30        40        50        60
pF1KE5 MAQAPADPGREGHLEQRILQVLTEAGSPVKLAQLVKECQAPKRELNQVLYRMKKELKVSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MAQAPADPGREGHLEQRILQVLTEAGSPVKLAQLVKECQAPKRELNQVLYRMKKELKVSL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 TSPATWCLGGTDPEGEGPAELALSSPAKRPQQHAATIPETPGPQFSQQREEDIYRFLKDN
       :::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS54 TSPATWCLGGTDPEGEGPAELALSSPAERPQQHAATIPETPGPQFSQQREEDIYRFLKDN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 GPQRALVIAQALGMRTAKDVNRDLYRMKSRHLLDMDEQSKAWTIYRPEDSGRRAKSASII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GPQRALVIAQALGMRTAKDVNRDLYRMKSRHLLDMDEQSKAWTIYRPEDSGRRAKSASII
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 YQHNPINMICQNGPNSWISIANSEAIQIGHGNIITRQTVSREDGSAGPRHLPSMAPGDSS
       ::::::::::::::::::::::::::::::::::::::::::::..     :. : : ..
CCDS54 YQHNPINMICQNGPNSWISIANSEAIQIGHGNIITRQTVSREDGKS-----PKRAQG-GD
              190       200       210       220            230     

              250       260       270       280       290       300
pF1KE5 TWGTLVDPWGPQDIHMERSILRRVQLGHSNEMRLHGVPSEGPAHIPPGSPPVSATAAGPE
         :   :: :                                                  
CCDS54 LGGEPPDPLGGGKG                                              
          240                                                      




429 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 01:46:28 2016 done: Tue Nov  8 01:46:28 2016
 Total Scan time:  2.730 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]