Result of FASTA (omim) for
pFN21AE5552
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5552, 417 aa
1>>>pF1KE5552 417 - 417 aa - 417 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.6721+/-0.000388; mu= -8.3729+/- 0.024
mean_var=265.5014+/-54.912, 0's: 0 Z-trim(120.6): 12 B-trim: 0 in 0/56
Lambda= 0.078712
statistics sampled from 36145 (36157) to 36145 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.755), E-opt: 0.2 (0.424), width: 16
Scan time: 9.320
The best scores are: opt bits E(85289)
NP_777567 (OMIM: 613822) serine/threonine-protein ( 417) 2732 323.4 6.8e-88
NP_001304955 (OMIM: 613822) serine/threonine-prote ( 379) 2475 294.2 3.8e-79
NP_001304954 (OMIM: 613822) serine/threonine-prote ( 360) 2074 248.6 1.9e-65
NP_001304956 (OMIM: 613822) serine/threonine-prote ( 246) 1470 179.9 6e-45
NP_001304957 (OMIM: 613822) serine/threonine-prote ( 69) 270 43.4 0.00022
>>NP_777567 (OMIM: 613822) serine/threonine-protein phos (417 aa)
initn: 2732 init1: 2732 opt: 2732 Z-score: 1699.0 bits: 323.4 E(85289): 6.8e-88
Smith-Waterman score: 2732; 100.0% identity (100.0% similar) in 417 aa overlap (1-417:1-417)
10 20 30 40 50 60
pF1KE5 MDVERLQEALKDFEKRGKKEVCPVLDQFLCHVAKTGETMIQWSQFKGYFIFKLEKVMDDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 MDVERLQEALKDFEKRGKKEVCPVLDQFLCHVAKTGETMIQWSQFKGYFIFKLEKVMDDF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 RTSAPEPRGPPNPNVEYIPFDEMKERILKIVTGFNGIPFTIQRLCELLTDPRRNYTGTDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 RTSAPEPRGPPNPNVEYIPFDEMKERILKIVTGFNGIPFTIQRLCELLTDPRRNYTGTDK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 FLRGVEKNVMVVSCVYPSSEKNNSNSLNRMNGVMFPGNSPSYTERSNINGPGTPRPLNRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 FLRGVEKNVMVVSCVYPSSEKNNSNSLNRMNGVMFPGNSPSYTERSNINGPGTPRPLNRP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 KVSLSAPMTTNGLPESTDSKEANLQQNEEKNHSDSSTSESEVSSVSPLKNKHPDEDAVEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 KVSLSAPMTTNGLPESTDSKEANLQQNEEKNHSDSSTSESEVSSVSPLKNKHPDEDAVEA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 EGHEVKRLRFDKEGEVRETASQTTSSEISSVMVGETEASSSSQDKDKDSRCTRQHCTEED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 EGHEVKRLRFDKEGEVRETASQTTSSEISSVMVGETEASSSSQDKDKDSRCTRQHCTEED
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 EEEDEEEEEESFMTSREMIPERKNQEKESDDALTVNEETSEENNQMEESDVSQAEKDLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 EEEDEEEEEESFMTSREMIPERKNQEKESDDALTVNEETSEENNQMEESDVSQAEKDLLH
310 320 330 340 350 360
370 380 390 400 410
pF1KE5 SEGSENEGPVSSSSSDCRETEELVGSNSSKTGEILSESSMENDDEATEVTDEPMEQD
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 SEGSENEGPVSSSSSDCRETEELVGSNSSKTGEILSESSMENDDEATEVTDEPMEQD
370 380 390 400 410
>>NP_001304955 (OMIM: 613822) serine/threonine-protein p (379 aa)
initn: 2475 init1: 2475 opt: 2475 Z-score: 1541.9 bits: 294.2 E(85289): 3.8e-79
Smith-Waterman score: 2475; 100.0% identity (100.0% similar) in 379 aa overlap (39-417:1-379)
10 20 30 40 50 60
pF1KE5 ALKDFEKRGKKEVCPVLDQFLCHVAKTGETMIQWSQFKGYFIFKLEKVMDDFRTSAPEPR
::::::::::::::::::::::::::::::
NP_001 MIQWSQFKGYFIFKLEKVMDDFRTSAPEPR
10 20 30
70 80 90 100 110 120
pF1KE5 GPPNPNVEYIPFDEMKERILKIVTGFNGIPFTIQRLCELLTDPRRNYTGTDKFLRGVEKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPPNPNVEYIPFDEMKERILKIVTGFNGIPFTIQRLCELLTDPRRNYTGTDKFLRGVEKN
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE5 VMVVSCVYPSSEKNNSNSLNRMNGVMFPGNSPSYTERSNINGPGTPRPLNRPKVSLSAPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VMVVSCVYPSSEKNNSNSLNRMNGVMFPGNSPSYTERSNINGPGTPRPLNRPKVSLSAPM
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE5 TTNGLPESTDSKEANLQQNEEKNHSDSSTSESEVSSVSPLKNKHPDEDAVEAEGHEVKRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTNGLPESTDSKEANLQQNEEKNHSDSSTSESEVSSVSPLKNKHPDEDAVEAEGHEVKRL
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE5 RFDKEGEVRETASQTTSSEISSVMVGETEASSSSQDKDKDSRCTRQHCTEEDEEEDEEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RFDKEGEVRETASQTTSSEISSVMVGETEASSSSQDKDKDSRCTRQHCTEEDEEEDEEEE
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE5 EESFMTSREMIPERKNQEKESDDALTVNEETSEENNQMEESDVSQAEKDLLHSEGSENEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EESFMTSREMIPERKNQEKESDDALTVNEETSEENNQMEESDVSQAEKDLLHSEGSENEG
280 290 300 310 320 330
370 380 390 400 410
pF1KE5 PVSSSSSDCRETEELVGSNSSKTGEILSESSMENDDEATEVTDEPMEQD
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVSSSSSDCRETEELVGSNSSKTGEILSESSMENDDEATEVTDEPMEQD
340 350 360 370
>>NP_001304954 (OMIM: 613822) serine/threonine-protein p (360 aa)
initn: 2074 init1: 2074 opt: 2074 Z-score: 1296.1 bits: 248.6 E(85289): 1.9e-65
Smith-Waterman score: 2203; 86.1% identity (86.3% similar) in 417 aa overlap (1-417:1-360)
10 20 30 40 50 60
pF1KE5 MDVERLQEALKDFEKRGKKEVCPVLDQFLCHVAKTGETMIQWSQFKGYFIFKLEKVMDDF
::::::::::::::::::::::::::::::::::::::.:
NP_001 MDVERLQEALKDFEKRGKKEVCPVLDQFLCHVAKTGETII--------------------
10 20 30 40
70 80 90 100 110 120
pF1KE5 RTSAPEPRGPPNPNVEYIPFDEMKERILKIVTGFNGIPFTIQRLCELLTDPRRNYTGTDK
:::::::::::::::::::::::
NP_001 -------------------------------------PFTIQRLCELLTDPRRNYTGTDK
50 60
130 140 150 160 170 180
pF1KE5 FLRGVEKNVMVVSCVYPSSEKNNSNSLNRMNGVMFPGNSPSYTERSNINGPGTPRPLNRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLRGVEKNVMVVSCVYPSSEKNNSNSLNRMNGVMFPGNSPSYTERSNINGPGTPRPLNRP
70 80 90 100 110 120
190 200 210 220 230 240
pF1KE5 KVSLSAPMTTNGLPESTDSKEANLQQNEEKNHSDSSTSESEVSSVSPLKNKHPDEDAVEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVSLSAPMTTNGLPESTDSKEANLQQNEEKNHSDSSTSESEVSSVSPLKNKHPDEDAVEA
130 140 150 160 170 180
250 260 270 280 290 300
pF1KE5 EGHEVKRLRFDKEGEVRETASQTTSSEISSVMVGETEASSSSQDKDKDSRCTRQHCTEED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGHEVKRLRFDKEGEVRETASQTTSSEISSVMVGETEASSSSQDKDKDSRCTRQHCTEED
190 200 210 220 230 240
310 320 330 340 350 360
pF1KE5 EEEDEEEEEESFMTSREMIPERKNQEKESDDALTVNEETSEENNQMEESDVSQAEKDLLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEEDEEEEEESFMTSREMIPERKNQEKESDDALTVNEETSEENNQMEESDVSQAEKDLLH
250 260 270 280 290 300
370 380 390 400 410
pF1KE5 SEGSENEGPVSSSSSDCRETEELVGSNSSKTGEILSESSMENDDEATEVTDEPMEQD
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEGSENEGPVSSSSSDCRETEELVGSNSSKTGEILSESSMENDDEATEVTDEPMEQD
310 320 330 340 350 360
>>NP_001304956 (OMIM: 613822) serine/threonine-protein p (246 aa)
initn: 1470 init1: 1470 opt: 1470 Z-score: 927.9 bits: 179.9 E(85289): 6e-45
Smith-Waterman score: 1470; 99.6% identity (99.6% similar) in 234 aa overlap (184-417:13-246)
160 170 180 190 200 210
pF1KE5 MFPGNSPSYTERSNINGPGTPRPLNRPKVSLSAPMTTNGLPESTDSKEANLQQNEEKNHS
: ::::::::::::::::::::::::::::
NP_001 MVLCFLEIHQAILRAPMTTNGLPESTDSKEANLQQNEEKNHS
10 20 30 40
220 230 240 250 260 270
pF1KE5 DSSTSESEVSSVSPLKNKHPDEDAVEAEGHEVKRLRFDKEGEVRETASQTTSSEISSVMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSSTSESEVSSVSPLKNKHPDEDAVEAEGHEVKRLRFDKEGEVRETASQTTSSEISSVMV
50 60 70 80 90 100
280 290 300 310 320 330
pF1KE5 GETEASSSSQDKDKDSRCTRQHCTEEDEEEDEEEEEESFMTSREMIPERKNQEKESDDAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GETEASSSSQDKDKDSRCTRQHCTEEDEEEDEEEEEESFMTSREMIPERKNQEKESDDAL
110 120 130 140 150 160
340 350 360 370 380 390
pF1KE5 TVNEETSEENNQMEESDVSQAEKDLLHSEGSENEGPVSSSSSDCRETEELVGSNSSKTGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVNEETSEENNQMEESDVSQAEKDLLHSEGSENEGPVSSSSSDCRETEELVGSNSSKTGE
170 180 190 200 210 220
400 410
pF1KE5 ILSESSMENDDEATEVTDEPMEQD
::::::::::::::::::::::::
NP_001 ILSESSMENDDEATEVTDEPMEQD
230 240
>>NP_001304957 (OMIM: 613822) serine/threonine-protein p (69 aa)
initn: 280 init1: 266 opt: 270 Z-score: 199.8 bits: 43.4 E(85289): 0.00022
Smith-Waterman score: 270; 87.2% identity (89.4% similar) in 47 aa overlap (1-44:1-47)
10 20 30 40 50
pF1KE5 MDVERLQEALKDFEKRGKKEVCPVLDQFLCHVAKTGETMIQ---WSQFKGYFIFKLEKVM
:::::::::::::::::::::::::::::::::::::::. : :
NP_001 MDVERLQEALKDFEKRGKKEVCPVLDQFLCHVAKTGETMLASKPWPQVIHLPQLPKLRGL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 DDFRTSAPEPRGPPNPNVEYIPFDEMKERILKIVTGFNGIPFTIQRLCELLTDPRRNYTG
NP_001 QIRDGVSPC
417 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 01:45:23 2016 done: Tue Nov 8 01:45:24 2016
Total Scan time: 9.320 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]