Result of FASTA (omim) for
pFN21AE5451
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5451, 350 aa
1>>>pF1KE5451 350 - 350 aa - 350 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6064+/-0.000352; mu= 15.3822+/- 0.022
mean_var=78.5643+/-15.203, 0's: 0 Z-trim(114.8): 20 B-trim: 0 in 0/56
Lambda= 0.144698
statistics sampled from 24874 (24890) to 24874 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.66), E-opt: 0.2 (0.292), width: 16
Scan time: 6.060
The best scores are: opt bits E(85289)
NP_076952 (OMIM: 606022) ADP-ribose pyrophosphatas ( 350) 2371 504.4 1.5e-142
XP_011530334 (OMIM: 606022) PREDICTED: ADP-ribose ( 300) 2059 439.2 5.4e-123
NP_932155 (OMIM: 606022) ADP-ribose pyrophosphatas ( 300) 2059 439.2 5.4e-123
NP_001234940 (OMIM: 606022) ADP-ribose pyrophospha ( 318) 1390 299.6 6.2e-81
XP_011530333 (OMIM: 606022) PREDICTED: ADP-ribose ( 181) 1196 258.9 6.1e-69
NP_003298 (OMIM: 603749) transient receptor potent (1503) 388 90.8 2e-17
XP_005261228 (OMIM: 603749) PREDICTED: transient r (1503) 388 90.8 2e-17
XP_016883945 (OMIM: 603749) PREDICTED: transient r (1533) 388 90.8 2.1e-17
XP_011528038 (OMIM: 603749) PREDICTED: transient r (1533) 388 90.8 2.1e-17
NP_001307279 (OMIM: 603749) transient receptor pot (1553) 388 90.8 2.1e-17
NP_001307281 (OMIM: 603749) transient receptor pot ( 184) 241 59.6 6.4e-09
NP_001307280 (OMIM: 603749) transient receptor pot (1469) 241 60.1 3.4e-08
XP_016883946 (OMIM: 603749) PREDICTED: transient r (1499) 241 60.2 3.5e-08
>>NP_076952 (OMIM: 606022) ADP-ribose pyrophosphatase, m (350 aa)
initn: 2371 init1: 2371 opt: 2371 Z-score: 2680.2 bits: 504.4 E(85289): 1.5e-142
Smith-Waterman score: 2371; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)
10 20 30 40 50 60
pF1KE5 MAGRLLGKALAAVSLSLALASVTIRSSRCRGIQAFRNSFSSSWFHLNTNVMSGSNGSKEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 MAGRLLGKALAAVSLSLALASVTIRSSRCRGIQAFRNSFSSSWFHLNTNVMSGSNGSKEN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 SHNKARTSPYPGSKVERSQVPNEKVGWLVEWQDYKPVEYTAVSVLAGPRWADPQISESNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 SHNKARTSPYPGSKVERSQVPNEKVGWLVEWQDYKPVEYTAVSVLAGPRWADPQISESNF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 SPKFNEKDGHVERKSKNGLYEIENGRPRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 SPKFNEKDGHVERKSKNGLYEIENGRPRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 DSSGNKIMHPVSGKHILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 DSSGNKIMHPVSGKHILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 KTSAEKREIEEKLHKLFSQDHLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 KTSAEKREIEEKLHKLFSQDHLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLML
250 260 270 280 290 300
310 320 330 340 350
pF1KE5 EAGDDAGKVKWVDINDKLKLYASHSQFIKLVAEKRDAHWSEDSEADCHAL
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 EAGDDAGKVKWVDINDKLKLYASHSQFIKLVAEKRDAHWSEDSEADCHAL
310 320 330 340 350
>>XP_011530334 (OMIM: 606022) PREDICTED: ADP-ribose pyro (300 aa)
initn: 2059 init1: 2059 opt: 2059 Z-score: 2329.1 bits: 439.2 E(85289): 5.4e-123
Smith-Waterman score: 2059; 100.0% identity (100.0% similar) in 300 aa overlap (51-350:1-300)
30 40 50 60 70 80
pF1KE5 SVTIRSSRCRGIQAFRNSFSSSWFHLNTNVMSGSNGSKENSHNKARTSPYPGSKVERSQV
::::::::::::::::::::::::::::::
XP_011 MSGSNGSKENSHNKARTSPYPGSKVERSQV
10 20 30
90 100 110 120 130 140
pF1KE5 PNEKVGWLVEWQDYKPVEYTAVSVLAGPRWADPQISESNFSPKFNEKDGHVERKSKNGLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PNEKVGWLVEWQDYKPVEYTAVSVLAGPRWADPQISESNFSPKFNEKDGHVERKSKNGLY
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE5 EIENGRPRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKRDSSGNKIMHPVSGKHILQFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EIENGRPRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKRDSSGNKIMHPVSGKHILQFV
100 110 120 130 140 150
210 220 230 240 250 260
pF1KE5 AIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQD
160 170 180 190 200 210
270 280 290 300 310 320
pF1KE5 HLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKL
220 230 240 250 260 270
330 340 350
pF1KE5 YASHSQFIKLVAEKRDAHWSEDSEADCHAL
::::::::::::::::::::::::::::::
XP_011 YASHSQFIKLVAEKRDAHWSEDSEADCHAL
280 290 300
>>NP_932155 (OMIM: 606022) ADP-ribose pyrophosphatase, m (300 aa)
initn: 2059 init1: 2059 opt: 2059 Z-score: 2329.1 bits: 439.2 E(85289): 5.4e-123
Smith-Waterman score: 2059; 100.0% identity (100.0% similar) in 300 aa overlap (51-350:1-300)
30 40 50 60 70 80
pF1KE5 SVTIRSSRCRGIQAFRNSFSSSWFHLNTNVMSGSNGSKENSHNKARTSPYPGSKVERSQV
::::::::::::::::::::::::::::::
NP_932 MSGSNGSKENSHNKARTSPYPGSKVERSQV
10 20 30
90 100 110 120 130 140
pF1KE5 PNEKVGWLVEWQDYKPVEYTAVSVLAGPRWADPQISESNFSPKFNEKDGHVERKSKNGLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_932 PNEKVGWLVEWQDYKPVEYTAVSVLAGPRWADPQISESNFSPKFNEKDGHVERKSKNGLY
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE5 EIENGRPRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKRDSSGNKIMHPVSGKHILQFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_932 EIENGRPRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKRDSSGNKIMHPVSGKHILQFV
100 110 120 130 140 150
210 220 230 240 250 260
pF1KE5 AIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_932 AIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQD
160 170 180 190 200 210
270 280 290 300 310 320
pF1KE5 HLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_932 HLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKL
220 230 240 250 260 270
330 340 350
pF1KE5 YASHSQFIKLVAEKRDAHWSEDSEADCHAL
::::::::::::::::::::::::::::::
NP_932 YASHSQFIKLVAEKRDAHWSEDSEADCHAL
280 290 300
>>NP_001234940 (OMIM: 606022) ADP-ribose pyrophosphatase (318 aa)
initn: 2140 init1: 1390 opt: 1390 Z-score: 1574.0 bits: 299.6 E(85289): 6.2e-81
Smith-Waterman score: 2080; 90.9% identity (90.9% similar) in 350 aa overlap (1-350:1-318)
10 20 30 40 50 60
pF1KE5 MAGRLLGKALAAVSLSLALASVTIRSSRCRGIQAFRNSFSSSWFHLNTNVMSGSNGSKEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAGRLLGKALAAVSLSLALASVTIRSSRCRGIQAFRNSFSSSWFHLNTNVMSGSNGSKEN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 SHNKARTSPYPGSKVERSQVPNEKVGWLVEWQDYKPVEYTAVSVLAGPRWADPQISESNF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHNKARTSPYPGSKVERSQVPNEKVGWLVEWQDYKPVEYTAVSVLAGPRWADPQI-----
70 80 90 100 110
130 140 150 160 170 180
pF1KE5 SPKFNEKDGHVERKSKNGLYEIENGRPRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKR
:::::::::::::::::::::::::::::::::
NP_001 ---------------------------RNPAGRTGLVGRGLLGRWGPNHAADPIITRWKR
120 130 140
190 200 210 220 230 240
pF1KE5 DSSGNKIMHPVSGKHILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSSGNKIMHPVSGKHILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQ
150 160 170 180 190 200
250 260 270 280 290 300
pF1KE5 KTSAEKREIEEKLHKLFSQDHLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KTSAEKREIEEKLHKLFSQDHLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLML
210 220 230 240 250 260
310 320 330 340 350
pF1KE5 EAGDDAGKVKWVDINDKLKLYASHSQFIKLVAEKRDAHWSEDSEADCHAL
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAGDDAGKVKWVDINDKLKLYASHSQFIKLVAEKRDAHWSEDSEADCHAL
270 280 290 300 310
>>XP_011530333 (OMIM: 606022) PREDICTED: ADP-ribose pyro (181 aa)
initn: 1196 init1: 1196 opt: 1196 Z-score: 1358.7 bits: 258.9 E(85289): 6.1e-69
Smith-Waterman score: 1196; 100.0% identity (100.0% similar) in 177 aa overlap (1-177:1-177)
10 20 30 40 50 60
pF1KE5 MAGRLLGKALAAVSLSLALASVTIRSSRCRGIQAFRNSFSSSWFHLNTNVMSGSNGSKEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAGRLLGKALAAVSLSLALASVTIRSSRCRGIQAFRNSFSSSWFHLNTNVMSGSNGSKEN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 SHNKARTSPYPGSKVERSQVPNEKVGWLVEWQDYKPVEYTAVSVLAGPRWADPQISESNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SHNKARTSPYPGSKVERSQVPNEKVGWLVEWQDYKPVEYTAVSVLAGPRWADPQISESNF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 SPKFNEKDGHVERKSKNGLYEIENGRPRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPKFNEKDGHVERKSKNGLYEIENGRPRNPAGRTGLVGRGLLGRWGPNHAADPIITRSPS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 DSSGNKIMHPVSGKHILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQ
XP_011 K
>>NP_003298 (OMIM: 603749) transient receptor potential (1503 aa)
initn: 520 init1: 296 opt: 388 Z-score: 433.7 bits: 90.8 E(85289): 2e-17
Smith-Waterman score: 558; 36.6% identity (60.6% similar) in 287 aa overlap (59-339:1236-1503)
30 40 50 60 70 80
pF1KE5 CRGIQAFRNSFSSSWFHLNTNVMSGSNGSKENSHNKARTSPYPGSKVERSQVPNEKVGWL
.. : .:: ::. : : :::::: :
NP_003 EADVPTLASQKAAEEPDAEPGGRKKTEEPGDSYHVNARHLLYPNCPVTRFPVPNEKVPWE
1210 1220 1230 1240 1250 1260
90 100 110 120 130 140
pF1KE5 VEWQDYKPVEYTAVSVLAGPRWADPQIS--ESNFSPKFNEKDGHVERKSKNGLYEIENGR
.:. : : ::: :. ::. . : . ..: :: .:.: .: : .. :
NP_003 TEFLIYDPPFYTAERKDAAA--MDPMGDTLEPLSTIQYNVVDGLRDRRSFHGPYTVQAGL
1270 1280 1290 1300 1310 1320
150 160 170 180 190 200
pF1KE5 PRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKRDSSGNKIMHPVSGKHILQFVAIKRKD
: :: ::::: ::: :. .::::. :..:::.:. .: . . :..:. ...:
NP_003 PLNPMGRTGLRGRGSLSCFGPNHTLYPMVTRWRRNEDGAICRKSI--KKMLEVLVVKLPL
1330 1340 1350 1360 1370 1380
210 220 230 240 250 260
pF1KE5 CGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYK
.::.::: .::: . ::: . .: :. :.: : . .::
NP_003 SEHWALPGGSREPGEMLPRKLKRILRQEHWPSF-----------ENLLKC----GMEVYK
1390 1400 1410 1420
270 280 290 300 310 320
pF1KE5 GYVDDPRNTDNAWMETEAVNYH--DETGEIMDNLM--LEAGDDAGKVKWVDINDKLKLYA
::.::::::::::.:: ::. : :.. .. : :.: :......: .. .. :::
NP_003 GYMDDPRNTDNAWIETVAVSVHFQDQNDVELNRLNSNLHACDSGASIRWQVVDRRIPLYA
1430 1440 1450 1460 1470 1480
330 340 350
pF1KE5 SHSQFIKLVAEKRDAHWSEDSEADCHAL
.:. ... .: . ::.
NP_003 NHKTLLQKAAAEFGAHY
1490 1500
>>XP_005261228 (OMIM: 603749) PREDICTED: transient recep (1503 aa)
initn: 520 init1: 296 opt: 388 Z-score: 433.7 bits: 90.8 E(85289): 2e-17
Smith-Waterman score: 558; 36.6% identity (60.6% similar) in 287 aa overlap (59-339:1236-1503)
30 40 50 60 70 80
pF1KE5 CRGIQAFRNSFSSSWFHLNTNVMSGSNGSKENSHNKARTSPYPGSKVERSQVPNEKVGWL
.. : .:: ::. : : :::::: :
XP_005 EADVPTLASQKAAEEPDAEPGGRKKTEEPGDSYHVNARHLLYPNCPVTRFPVPNEKVPWE
1210 1220 1230 1240 1250 1260
90 100 110 120 130 140
pF1KE5 VEWQDYKPVEYTAVSVLAGPRWADPQIS--ESNFSPKFNEKDGHVERKSKNGLYEIENGR
.:. : : ::: :. ::. . : . ..: :: .:.: .: : .. :
XP_005 TEFLIYDPPFYTAERKDAAA--MDPMGDTLEPLSTIQYNVVDGLRDRRSFHGPYTVQAGL
1270 1280 1290 1300 1310 1320
150 160 170 180 190 200
pF1KE5 PRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKRDSSGNKIMHPVSGKHILQFVAIKRKD
: :: ::::: ::: :. .::::. :..:::.:. .: . . :..:. ...:
XP_005 PLNPMGRTGLRGRGSLSCFGPNHTLYPMVTRWRRNEDGAICRKSI--KKMLEVLVVKLPL
1330 1340 1350 1360 1370 1380
210 220 230 240 250 260
pF1KE5 CGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYK
.::.::: .::: . ::: . .: :. :.: : . .::
XP_005 SEHWALPGGSREPGEMLPRKLKRILRQEHWPSF-----------ENLLKC----GMEVYK
1390 1400 1410 1420
270 280 290 300 310 320
pF1KE5 GYVDDPRNTDNAWMETEAVNYH--DETGEIMDNLM--LEAGDDAGKVKWVDINDKLKLYA
::.::::::::::.:: ::. : :.. .. : :.: :......: .. .. :::
XP_005 GYMDDPRNTDNAWIETVAVSVHFQDQNDVELNRLNSNLHACDSGASIRWQVVDRRIPLYA
1430 1440 1450 1460 1470 1480
330 340 350
pF1KE5 SHSQFIKLVAEKRDAHWSEDSEADCHAL
.:. ... .: . ::.
XP_005 NHKTLLQKAAAEFGAHY
1490 1500
>>XP_016883945 (OMIM: 603749) PREDICTED: transient recep (1533 aa)
initn: 520 init1: 296 opt: 388 Z-score: 433.6 bits: 90.8 E(85289): 2.1e-17
Smith-Waterman score: 558; 36.6% identity (60.6% similar) in 287 aa overlap (59-339:1266-1533)
30 40 50 60 70 80
pF1KE5 CRGIQAFRNSFSSSWFHLNTNVMSGSNGSKENSHNKARTSPYPGSKVERSQVPNEKVGWL
.. : .:: ::. : : :::::: :
XP_016 EADVPTLASQKAAEEPDAEPGGRKKTEEPGDSYHVNARHLLYPNCPVTRFPVPNEKVPWE
1240 1250 1260 1270 1280 1290
90 100 110 120 130 140
pF1KE5 VEWQDYKPVEYTAVSVLAGPRWADPQIS--ESNFSPKFNEKDGHVERKSKNGLYEIENGR
.:. : : ::: :. ::. . : . ..: :: .:.: .: : .. :
XP_016 TEFLIYDPPFYTAERKDAAA--MDPMGDTLEPLSTIQYNVVDGLRDRRSFHGPYTVQAGL
1300 1310 1320 1330 1340 1350
150 160 170 180 190 200
pF1KE5 PRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKRDSSGNKIMHPVSGKHILQFVAIKRKD
: :: ::::: ::: :. .::::. :..:::.:. .: . . :..:. ...:
XP_016 PLNPMGRTGLRGRGSLSCFGPNHTLYPMVTRWRRNEDGAICRKSI--KKMLEVLVVKLPL
1360 1370 1380 1390 1400 1410
210 220 230 240 250 260
pF1KE5 CGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYK
.::.::: .::: . ::: . .: :. :.: : . .::
XP_016 SEHWALPGGSREPGEMLPRKLKRILRQEHWPSF-----------ENLLKC----GMEVYK
1420 1430 1440 1450
270 280 290 300 310 320
pF1KE5 GYVDDPRNTDNAWMETEAVNYH--DETGEIMDNLM--LEAGDDAGKVKWVDINDKLKLYA
::.::::::::::.:: ::. : :.. .. : :.: :......: .. .. :::
XP_016 GYMDDPRNTDNAWIETVAVSVHFQDQNDVELNRLNSNLHACDSGASIRWQVVDRRIPLYA
1460 1470 1480 1490 1500 1510
330 340 350
pF1KE5 SHSQFIKLVAEKRDAHWSEDSEADCHAL
.:. ... .: . ::.
XP_016 NHKTLLQKAAAEFGAHY
1520 1530
>>XP_011528038 (OMIM: 603749) PREDICTED: transient recep (1533 aa)
initn: 520 init1: 296 opt: 388 Z-score: 433.6 bits: 90.8 E(85289): 2.1e-17
Smith-Waterman score: 558; 36.6% identity (60.6% similar) in 287 aa overlap (59-339:1266-1533)
30 40 50 60 70 80
pF1KE5 CRGIQAFRNSFSSSWFHLNTNVMSGSNGSKENSHNKARTSPYPGSKVERSQVPNEKVGWL
.. : .:: ::. : : :::::: :
XP_011 EADVPTLASQKAAEEPDAEPGGRKKTEEPGDSYHVNARHLLYPNCPVTRFPVPNEKVPWE
1240 1250 1260 1270 1280 1290
90 100 110 120 130 140
pF1KE5 VEWQDYKPVEYTAVSVLAGPRWADPQIS--ESNFSPKFNEKDGHVERKSKNGLYEIENGR
.:. : : ::: :. ::. . : . ..: :: .:.: .: : .. :
XP_011 TEFLIYDPPFYTAERKDAAA--MDPMGDTLEPLSTIQYNVVDGLRDRRSFHGPYTVQAGL
1300 1310 1320 1330 1340 1350
150 160 170 180 190 200
pF1KE5 PRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKRDSSGNKIMHPVSGKHILQFVAIKRKD
: :: ::::: ::: :. .::::. :..:::.:. .: . . :..:. ...:
XP_011 PLNPMGRTGLRGRGSLSCFGPNHTLYPMVTRWRRNEDGAICRKSI--KKMLEVLVVKLPL
1360 1370 1380 1390 1400 1410
210 220 230 240 250 260
pF1KE5 CGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYK
.::.::: .::: . ::: . .: :. :.: : . .::
XP_011 SEHWALPGGSREPGEMLPRKLKRILRQEHWPSF-----------ENLLKC----GMEVYK
1420 1430 1440 1450
270 280 290 300 310 320
pF1KE5 GYVDDPRNTDNAWMETEAVNYH--DETGEIMDNLM--LEAGDDAGKVKWVDINDKLKLYA
::.::::::::::.:: ::. : :.. .. : :.: :......: .. .. :::
XP_011 GYMDDPRNTDNAWIETVAVSVHFQDQNDVELNRLNSNLHACDSGASIRWQVVDRRIPLYA
1460 1470 1480 1490 1500 1510
330 340 350
pF1KE5 SHSQFIKLVAEKRDAHWSEDSEADCHAL
.:. ... .: . ::.
XP_011 NHKTLLQKAAAEFGAHY
1520 1530
>>NP_001307279 (OMIM: 603749) transient receptor potenti (1553 aa)
initn: 520 init1: 296 opt: 388 Z-score: 433.5 bits: 90.8 E(85289): 2.1e-17
Smith-Waterman score: 558; 36.6% identity (60.6% similar) in 287 aa overlap (59-339:1286-1553)
30 40 50 60 70 80
pF1KE5 CRGIQAFRNSFSSSWFHLNTNVMSGSNGSKENSHNKARTSPYPGSKVERSQVPNEKVGWL
.. : .:: ::. : : :::::: :
NP_001 EADVPTLASQKAAEEPDAEPGGRKKTEEPGDSYHVNARHLLYPNCPVTRFPVPNEKVPWE
1260 1270 1280 1290 1300 1310
90 100 110 120 130 140
pF1KE5 VEWQDYKPVEYTAVSVLAGPRWADPQIS--ESNFSPKFNEKDGHVERKSKNGLYEIENGR
.:. : : ::: :. ::. . : . ..: :: .:.: .: : .. :
NP_001 TEFLIYDPPFYTAERKDAAA--MDPMGDTLEPLSTIQYNVVDGLRDRRSFHGPYTVQAGL
1320 1330 1340 1350 1360 1370
150 160 170 180 190 200
pF1KE5 PRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKRDSSGNKIMHPVSGKHILQFVAIKRKD
: :: ::::: ::: :. .::::. :..:::.:. .: . . :..:. ...:
NP_001 PLNPMGRTGLRGRGSLSCFGPNHTLYPMVTRWRRNEDGAICRKSI--KKMLEVLVVKLPL
1380 1390 1400 1410 1420 1430
210 220 230 240 250 260
pF1KE5 CGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYK
.::.::: .::: . ::: . .: :. :.: : . .::
NP_001 SEHWALPGGSREPGEMLPRKLKRILRQEHWPSF-----------ENLLKC----GMEVYK
1440 1450 1460 1470
270 280 290 300 310 320
pF1KE5 GYVDDPRNTDNAWMETEAVNYH--DETGEIMDNLM--LEAGDDAGKVKWVDINDKLKLYA
::.::::::::::.:: ::. : :.. .. : :.: :......: .. .. :::
NP_001 GYMDDPRNTDNAWIETVAVSVHFQDQNDVELNRLNSNLHACDSGASIRWQVVDRRIPLYA
1480 1490 1500 1510 1520 1530
330 340 350
pF1KE5 SHSQFIKLVAEKRDAHWSEDSEADCHAL
.:. ... .: . ::.
NP_001 NHKTLLQKAAAEFGAHY
1540 1550
350 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 00:53:47 2016 done: Tue Nov 8 00:53:48 2016
Total Scan time: 6.060 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]