Result of FASTA (omim) for
pFN21AE5422
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5422, 332 aa
1>>>pF1KE5422 332 - 332 aa - 332 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.5803+/-0.000435; mu= 19.9413+/- 0.027
mean_var=62.1809+/-12.904, 0's: 0 Z-trim(109.1): 30 B-trim: 0 in 0/51
Lambda= 0.162647
statistics sampled from 17205 (17235) to 17205 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.565), E-opt: 0.2 (0.202), width: 16
Scan time: 5.690
The best scores are: opt bits E(85289)
NP_059144 (OMIM: 150150) L-lactate dehydrogenase C ( 332) 2144 512.1 6.7e-145
NP_002292 (OMIM: 150150) L-lactate dehydrogenase C ( 332) 2144 512.1 6.7e-145
NP_005557 (OMIM: 150000,612933) L-lactate dehydrog ( 332) 1745 418.4 1e-116
NP_001158886 (OMIM: 150000,612933) L-lactate dehyd ( 361) 1745 418.5 1.1e-116
NP_001167568 (OMIM: 150100,614128) L-lactate dehyd ( 334) 1584 380.7 2.4e-105
NP_002291 (OMIM: 150100,614128) L-lactate dehydrog ( 334) 1584 380.7 2.4e-105
NP_001302466 (OMIM: 150100,614128) L-lactate dehyd ( 341) 1584 380.7 2.5e-105
XP_016873211 (OMIM: 150150) PREDICTED: L-lactate d ( 216) 1436 345.8 5e-95
XP_016873210 (OMIM: 150150) PREDICTED: L-lactate d ( 216) 1436 345.8 5e-95
XP_006719137 (OMIM: 150100,614128) PREDICTED: L-la ( 353) 1382 333.3 4.7e-91
NP_001158888 (OMIM: 150000,612933) L-lactate dehyd ( 241) 1247 301.5 1.2e-81
NP_001158887 (OMIM: 150000,612933) L-lactate dehyd ( 274) 1206 291.9 1.1e-78
NP_001128711 (OMIM: 150000,612933) L-lactate dehyd ( 274) 1091 264.9 1.4e-70
XP_016873475 (OMIM: 610985) PREDICTED: ubiquitin-c ( 249) 487 123.1 6e-28
NP_001248313 (OMIM: 610985) ubiquitin-conjugating ( 341) 487 123.3 7.6e-28
XP_016873474 (OMIM: 610985) PREDICTED: ubiquitin-c ( 341) 487 123.3 7.6e-28
NP_001248314 (OMIM: 610985) ubiquitin-conjugating ( 341) 487 123.3 7.6e-28
NP_001248312 (OMIM: 610985) ubiquitin-conjugating ( 357) 487 123.3 7.9e-28
NP_060784 (OMIM: 610985) ubiquitin-conjugating enz ( 379) 487 123.3 8.2e-28
NP_001248311 (OMIM: 610985) ubiquitin-conjugating ( 449) 487 123.4 9.3e-28
NP_001035787 (OMIM: 610985) ubiquitin-conjugating ( 471) 487 123.4 9.7e-28
XP_011518503 (OMIM: 610985) PREDICTED: ubiquitin-c ( 248) 377 97.3 3.5e-20
XP_006718318 (OMIM: 610985) PREDICTED: ubiquitin-c ( 248) 377 97.3 3.5e-20
NP_005909 (OMIM: 154100) malate dehydrogenase, mit ( 338) 217 59.9 8.9e-09
NP_001248315 (OMIM: 610985) ubiquitin-conjugating ( 199) 204 56.7 5e-08
NP_001186040 (OMIM: 154200) malate dehydrogenase, ( 352) 195 54.7 3.3e-07
NP_005908 (OMIM: 154200) malate dehydrogenase, cyt ( 334) 186 52.6 1.4e-06
NP_001303303 (OMIM: 154200) malate dehydrogenase, ( 353) 186 52.6 1.4e-06
NP_001186041 (OMIM: 154200) malate dehydrogenase, ( 245) 136 40.8 0.0037
>>NP_059144 (OMIM: 150150) L-lactate dehydrogenase C cha (332 aa)
initn: 2144 init1: 2144 opt: 2144 Z-score: 2722.4 bits: 512.1 E(85289): 6.7e-145
Smith-Waterman score: 2144; 100.0% identity (100.0% similar) in 332 aa overlap (1-332:1-332)
10 20 30 40 50 60
pF1KE5 MSTVKEQLIEKLIEDDENSQCKITIVGTGAVGMACAISILLKDLADELALVDVALDKLKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_059 MSTVKEQLIEKLIEDDENSQCKITIVGTGAVGMACAISILLKDLADELALVDVALDKLKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 EMMDLQHGSLFFSTSKITSGKDYSVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_059 EMMDLQHGSLFFSTSKITSGKDYSVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKSI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 IPAIVHYSPDCKILVVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_059 IPAIVHYSPDCKILVVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 HPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_059 HPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAYE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 IIKLKGYTSWAIGLSVMDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_059 IIKLKGYTSWAIGLSVMDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNGV
250 260 270 280 290 300
310 320 330
pF1KE5 SDVVKINLNSEEEALFKKSAETLWNIQKDLIF
::::::::::::::::::::::::::::::::
NP_059 SDVVKINLNSEEEALFKKSAETLWNIQKDLIF
310 320 330
>>NP_002292 (OMIM: 150150) L-lactate dehydrogenase C cha (332 aa)
initn: 2144 init1: 2144 opt: 2144 Z-score: 2722.4 bits: 512.1 E(85289): 6.7e-145
Smith-Waterman score: 2144; 100.0% identity (100.0% similar) in 332 aa overlap (1-332:1-332)
10 20 30 40 50 60
pF1KE5 MSTVKEQLIEKLIEDDENSQCKITIVGTGAVGMACAISILLKDLADELALVDVALDKLKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MSTVKEQLIEKLIEDDENSQCKITIVGTGAVGMACAISILLKDLADELALVDVALDKLKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 EMMDLQHGSLFFSTSKITSGKDYSVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 EMMDLQHGSLFFSTSKITSGKDYSVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKSI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 IPAIVHYSPDCKILVVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 IPAIVHYSPDCKILVVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 HPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 HPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAYE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 IIKLKGYTSWAIGLSVMDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 IIKLKGYTSWAIGLSVMDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNGV
250 260 270 280 290 300
310 320 330
pF1KE5 SDVVKINLNSEEEALFKKSAETLWNIQKDLIF
::::::::::::::::::::::::::::::::
NP_002 SDVVKINLNSEEEALFKKSAETLWNIQKDLIF
310 320 330
>>NP_005557 (OMIM: 150000,612933) L-lactate dehydrogenas (332 aa)
initn: 1723 init1: 1723 opt: 1745 Z-score: 2216.4 bits: 418.4 E(85289): 1e-116
Smith-Waterman score: 1745; 75.3% identity (94.3% similar) in 332 aa overlap (1-332:1-332)
10 20 30 40 50 60
pF1KE5 MSTVKEQLIEKLIEDDENSQCKITIVGTGAVGMACAISILLKDLADELALVDVALDKLKG
:.:.:.::: .:...... : :::.::.::::::::::::.:::::::::::: :::::
NP_005 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 EMMDLQHGSLFFSTSKITSGKDYSVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKSI
:::::::::::. : ::.:::::.:.:::..::.::::::::::.:: :::::: :.: :
NP_005 EMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 IPAIVHYSPDCKILVVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGV
:: .:.:::.::.:.::::::::::..:::::.: .:::::::::::::::::.::.:::
NP_005 IPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 HPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAYE
:: :::::..:::::::::.:::.:::::.:::: : ::::.:::.::..::::..::::
NP_005 HPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 IIKLKGYTSWAIGLSVMDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNGV
.::::::::::::::: ::. ::.::::::::::::.:::::::...:::.::.::.::.
NP_005 VIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGI
250 260 270 280 290 300
310 320 330
pF1KE5 SDVVKINLNSEEEALFKKSAETLWNIQKDLIF
::.::..:.::::: .::::.:::.:::.: :
NP_005 SDLVKVTLTSEEEARLKKSADTLWGIQKELQF
310 320 330
>>NP_001158886 (OMIM: 150000,612933) L-lactate dehydroge (361 aa)
initn: 1723 init1: 1723 opt: 1745 Z-score: 2215.9 bits: 418.5 E(85289): 1.1e-116
Smith-Waterman score: 1745; 75.3% identity (94.3% similar) in 332 aa overlap (1-332:30-361)
10 20 30
pF1KE5 MSTVKEQLIEKLIEDDENSQCKITIVGTGAV
:.:.:.::: .:...... : :::.::.:::
NP_001 MGEPSGGYTYTQTSIFLFHAKIPFGSKSNMATLKDQLIYNLLKEEQTPQNKITVVGVGAV
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE5 GMACAISILLKDLADELALVDVALDKLKGEMMDLQHGSLFFSTSKITSGKDYSVSANSRI
:::::::::.:::::::::::: ::::::::::::::::. : ::.:::::.:.:::..
NP_001 GMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSKL
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE5 VIVTAGARQQEGETRLALVQRNVAIMKSIIPAIVHYSPDCKILVVSNPVDILTYIVWKIS
::.::::::::::.:: :::::: :.: ::: .:.:::.::.:.::::::::::..::::
NP_001 VIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKIS
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE5 GLPVTRVIGSGCNLDSARFRYLIGEKLGVHPTSCHGWIIGEHGDSSVPLWSGVNVAGVAL
:.: .:::::::::::::::::.::.::::: :::::..:::::::::.:::.:::::.:
NP_001 GFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE5 KTLDPKLGTDSDKEHWKNIHKQVIQSAYEIIKLKGYTSWAIGLSVMDLVGSILKNLRRVH
::: : ::::.:::.::..::::..::::.::::::::::::::: ::. ::.:::::::
NP_001 KTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVH
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE5 PVSTMVKGLYGIKEELFLSIPCVLGRNGVSDVVKINLNSEEEALFKKSAETLWNIQKDLI
:::::.:::::::...:::.::.::.::.::.::..:.::::: .::::.:::.:::.:
NP_001 PVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKVTLTSEEEARLKKSADTLWGIQKELQ
310 320 330 340 350 360
pF1KE5 F
:
NP_001 F
>>NP_001167568 (OMIM: 150100,614128) L-lactate dehydroge (334 aa)
initn: 1554 init1: 1554 opt: 1584 Z-score: 2012.2 bits: 380.7 E(85289): 2.4e-105
Smith-Waterman score: 1584; 69.8% identity (90.9% similar) in 331 aa overlap (1-330:1-331)
10 20 30 40 50
pF1KE5 MSTVKEQLIEKLIEDDEN-SQCKITIVGTGAVGMACAISILLKDLADELALVDVALDKLK
:.:.::.:: . :.. . . :::.::.: :::::::::: :.:::::::::: ::::
NP_001 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 GEMMDLQHGSLFFSTSKITSGKDYSVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKS
::::::::::::..: ::.. :::::.:::.::.::::.::::::.:: :::::: ..:
NP_001 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE5 IIPAIVHYSPDCKILVVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLG
::: ::.::::: :.:::::::::::..::.:::: :::::::::::::::::..::::
NP_001 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE5 VHPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAY
.::.::::::.:::::::: .:::::::::.:. :.:..:::.:.:.::..::.:..:::
NP_001 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE5 EIIKLKGYTSWAIGLSVMDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNG
:.:::::::.::::::: ::. :.:::: :.:::::::::.:::..:.:::.::.:. :
NP_001 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
250 260 270 280 290 300
300 310 320 330
pF1KE5 VSDVVKINLNSEEEALFKKSAETLWNIQKDLIF
...:.. .:...: : .::::.:::.:::::
NP_001 LTSVINQKLKDDEVAQLKKSADTLWDIQKDLKDL
310 320 330
>>NP_002291 (OMIM: 150100,614128) L-lactate dehydrogenas (334 aa)
initn: 1554 init1: 1554 opt: 1584 Z-score: 2012.2 bits: 380.7 E(85289): 2.4e-105
Smith-Waterman score: 1584; 69.8% identity (90.9% similar) in 331 aa overlap (1-330:1-331)
10 20 30 40 50
pF1KE5 MSTVKEQLIEKLIEDDEN-SQCKITIVGTGAVGMACAISILLKDLADELALVDVALDKLK
:.:.::.:: . :.. . . :::.::.: :::::::::: :.:::::::::: ::::
NP_002 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 GEMMDLQHGSLFFSTSKITSGKDYSVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKS
::::::::::::..: ::.. :::::.:::.::.::::.::::::.:: :::::: ..:
NP_002 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE5 IIPAIVHYSPDCKILVVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLG
::: ::.::::: :.:::::::::::..::.:::: :::::::::::::::::..::::
NP_002 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE5 VHPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAY
.::.::::::.:::::::: .:::::::::.:. :.:..:::.:.:.::..::.:..:::
NP_002 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE5 EIIKLKGYTSWAIGLSVMDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNG
:.:::::::.::::::: ::. :.:::: :.:::::::::.:::..:.:::.::.:. :
NP_002 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
250 260 270 280 290 300
300 310 320 330
pF1KE5 VSDVVKINLNSEEEALFKKSAETLWNIQKDLIF
...:.. .:...: : .::::.:::.:::::
NP_002 LTSVINQKLKDDEVAQLKKSADTLWDIQKDLKDL
310 320 330
>>NP_001302466 (OMIM: 150100,614128) L-lactate dehydroge (341 aa)
initn: 1554 init1: 1554 opt: 1584 Z-score: 2012.1 bits: 380.7 E(85289): 2.5e-105
Smith-Waterman score: 1584; 69.8% identity (90.9% similar) in 331 aa overlap (1-330:1-331)
10 20 30 40 50
pF1KE5 MSTVKEQLIEKLIEDDEN-SQCKITIVGTGAVGMACAISILLKDLADELALVDVALDKLK
:.:.::.:: . :.. . . :::.::.: :::::::::: :.:::::::::: ::::
NP_001 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 GEMMDLQHGSLFFSTSKITSGKDYSVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKS
::::::::::::..: ::.. :::::.:::.::.::::.::::::.:: :::::: ..:
NP_001 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE5 IIPAIVHYSPDCKILVVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLG
::: ::.::::: :.:::::::::::..::.:::: :::::::::::::::::..::::
NP_001 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE5 VHPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAY
.::.::::::.:::::::: .:::::::::.:. :.:..:::.:.:.::..::.:..:::
NP_001 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE5 EIIKLKGYTSWAIGLSVMDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNG
:.:::::::.::::::: ::. :.:::: :.:::::::::.:::..:.:::.::.:. :
NP_001 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
250 260 270 280 290 300
300 310 320 330
pF1KE5 VSDVVKINLNSEEEALFKKSAETLWNIQKDLIF
...:.. .:...: : .::::.:::.:::::
NP_001 LTSVINQKLKDDEVAQLKKSADTLWDIQKDLKDLXLVSSRL
310 320 330 340
>>XP_016873211 (OMIM: 150150) PREDICTED: L-lactate dehyd (216 aa)
initn: 1436 init1: 1436 opt: 1436 Z-score: 1827.0 bits: 345.8 E(85289): 5e-95
Smith-Waterman score: 1436; 100.0% identity (100.0% similar) in 216 aa overlap (117-332:1-216)
90 100 110 120 130 140
pF1KE5 ANSRIVIVTAGARQQEGETRLALVQRNVAIMKSIIPAIVHYSPDCKILVVSNPVDILTYI
::::::::::::::::::::::::::::::
XP_016 MKSIIPAIVHYSPDCKILVVSNPVDILTYI
10 20 30
150 160 170 180 190 200
pF1KE5 VWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGVHPTSCHGWIIGEHGDSSVPLWSGVNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGVHPTSCHGWIIGEHGDSSVPLWSGVNV
40 50 60 70 80 90
210 220 230 240 250 260
pF1KE5 AGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAYEIIKLKGYTSWAIGLSVMDLVGSILKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAYEIIKLKGYTSWAIGLSVMDLVGSILKN
100 110 120 130 140 150
270 280 290 300 310 320
pF1KE5 LRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNGVSDVVKINLNSEEEALFKKSAETLWNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNGVSDVVKINLNSEEEALFKKSAETLWNI
160 170 180 190 200 210
330
pF1KE5 QKDLIF
::::::
XP_016 QKDLIF
>>XP_016873210 (OMIM: 150150) PREDICTED: L-lactate dehyd (216 aa)
initn: 1436 init1: 1436 opt: 1436 Z-score: 1827.0 bits: 345.8 E(85289): 5e-95
Smith-Waterman score: 1436; 100.0% identity (100.0% similar) in 216 aa overlap (117-332:1-216)
90 100 110 120 130 140
pF1KE5 ANSRIVIVTAGARQQEGETRLALVQRNVAIMKSIIPAIVHYSPDCKILVVSNPVDILTYI
::::::::::::::::::::::::::::::
XP_016 MKSIIPAIVHYSPDCKILVVSNPVDILTYI
10 20 30
150 160 170 180 190 200
pF1KE5 VWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGVHPTSCHGWIIGEHGDSSVPLWSGVNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGVHPTSCHGWIIGEHGDSSVPLWSGVNV
40 50 60 70 80 90
210 220 230 240 250 260
pF1KE5 AGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAYEIIKLKGYTSWAIGLSVMDLVGSILKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAYEIIKLKGYTSWAIGLSVMDLVGSILKN
100 110 120 130 140 150
270 280 290 300 310 320
pF1KE5 LRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNGVSDVVKINLNSEEEALFKKSAETLWNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNGVSDVVKINLNSEEEALFKKSAETLWNI
160 170 180 190 200 210
330
pF1KE5 QKDLIF
::::::
XP_016 QKDLIF
>>XP_006719137 (OMIM: 150100,614128) PREDICTED: L-lactat (353 aa)
initn: 1352 init1: 1352 opt: 1382 Z-score: 1755.7 bits: 333.3 E(85289): 4.7e-91
Smith-Waterman score: 1382; 72.8% identity (91.0% similar) in 279 aa overlap (1-278:1-279)
10 20 30 40 50
pF1KE5 MSTVKEQLIEKLIEDDEN-SQCKITIVGTGAVGMACAISILLKDLADELALVDVALDKLK
:.:.::.:: . :.. . . :::.::.: :::::::::: :.:::::::::: ::::
XP_006 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 GEMMDLQHGSLFFSTSKITSGKDYSVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKS
::::::::::::..: ::.. :::::.:::.::.::::.::::::.:: :::::: ..:
XP_006 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE5 IIPAIVHYSPDCKILVVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLG
::: ::.::::: :.:::::::::::..::.:::: :::::::::::::::::..::::
XP_006 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE5 VHPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAY
.::.::::::.:::::::: .:::::::::.:. :.:..:::.:.:.::..::.:..:::
XP_006 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE5 EIIKLKGYTSWAIGLSVMDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNG
:.:::::::.::::::: ::. :.:::: :.::::::::
XP_006 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKVRQTTTKCNMISRIVFYKKIH
250 260 270 280 290 300
300 310 320 330
pF1KE5 VSDVVKINLNSEEEALFKKSAETLWNIQKDLIF
XP_006 LKRLRPDKIIVQGYFCLSKFYVNYSHFPTEVLDSKGRKLRESKTFNRLLSFFI
310 320 330 340 350
332 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 00:36:22 2016 done: Tue Nov 8 00:36:23 2016
Total Scan time: 5.690 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]