Result of FASTA (omim) for
pFN21AE5355
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5355, 294 aa
1>>>pF1KE5355 294 - 294 aa - 294 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2465+/-0.000441; mu= 14.9330+/- 0.027
mean_var=55.3880+/-10.894, 0's: 0 Z-trim(109.3): 19 B-trim: 602 in 1/48
Lambda= 0.172332
statistics sampled from 17401 (17419) to 17401 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.575), E-opt: 0.2 (0.204), width: 16
Scan time: 4.630
The best scores are: opt bits E(85289)
NP_001311017 (OMIM: 193245) voltage-dependent anio ( 294) 1966 497.2 1.6e-140
NP_001171752 (OMIM: 193245) voltage-dependent anio ( 294) 1966 497.2 1.6e-140
NP_003366 (OMIM: 193245) voltage-dependent anion-s ( 294) 1966 497.2 1.6e-140
NP_001171712 (OMIM: 193245) voltage-dependent anio ( 309) 1884 476.8 2.3e-134
NP_001311019 (OMIM: 193245) voltage-dependent anio ( 255) 1616 410.2 2.2e-114
NP_001311016 (OMIM: 193245) voltage-dependent anio ( 255) 1616 410.2 2.2e-114
NP_001311018 (OMIM: 193245) voltage-dependent anio ( 255) 1616 410.2 2.2e-114
XP_005272132 (OMIM: 604492) PREDICTED: voltage-dep ( 283) 1484 377.3 1.8e-104
XP_016865310 (OMIM: 604492) PREDICTED: voltage-dep ( 283) 1484 377.3 1.8e-104
XP_016865311 (OMIM: 604492) PREDICTED: voltage-dep ( 283) 1484 377.3 1.8e-104
XP_016865312 (OMIM: 604492) PREDICTED: voltage-dep ( 283) 1484 377.3 1.8e-104
NP_003365 (OMIM: 604492) voltage-dependent anion-s ( 283) 1484 377.3 1.8e-104
NP_005653 (OMIM: 610029) voltage-dependent anion-s ( 283) 1448 368.4 9e-102
NP_001129166 (OMIM: 610029) voltage-dependent anio ( 284) 1436 365.4 7.1e-101
XP_006716457 (OMIM: 610029) PREDICTED: voltage-dep ( 251) 1230 314.2 1.7e-85
>>NP_001311017 (OMIM: 193245) voltage-dependent anion-se (294 aa)
initn: 1966 init1: 1966 opt: 1966 Z-score: 2643.9 bits: 497.2 E(85289): 1.6e-140
Smith-Waterman score: 1966; 100.0% identity (100.0% similar) in 294 aa overlap (1-294:1-294)
10 20 30 40 50 60
pF1KE5 MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 KSGKIKSSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSGKIKSSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 AVGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDP
190 200 210 220 230 240
250 260 270 280 290
pF1KE5 TASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
250 260 270 280 290
>>NP_001171752 (OMIM: 193245) voltage-dependent anion-se (294 aa)
initn: 1966 init1: 1966 opt: 1966 Z-score: 2643.9 bits: 497.2 E(85289): 1.6e-140
Smith-Waterman score: 1966; 100.0% identity (100.0% similar) in 294 aa overlap (1-294:1-294)
10 20 30 40 50 60
pF1KE5 MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 KSGKIKSSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSGKIKSSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 AVGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDP
190 200 210 220 230 240
250 260 270 280 290
pF1KE5 TASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
250 260 270 280 290
>>NP_003366 (OMIM: 193245) voltage-dependent anion-selec (294 aa)
initn: 1966 init1: 1966 opt: 1966 Z-score: 2643.9 bits: 497.2 E(85289): 1.6e-140
Smith-Waterman score: 1966; 100.0% identity (100.0% similar) in 294 aa overlap (1-294:1-294)
10 20 30 40 50 60
pF1KE5 MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 KSGKIKSSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KSGKIKSSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 AVGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 AVGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDP
190 200 210 220 230 240
250 260 270 280 290
pF1KE5 TASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
250 260 270 280 290
>>NP_001171712 (OMIM: 193245) voltage-dependent anion-se (309 aa)
initn: 1884 init1: 1884 opt: 1884 Z-score: 2533.4 bits: 476.8 E(85289): 2.3e-134
Smith-Waterman score: 1884; 100.0% identity (100.0% similar) in 283 aa overlap (12-294:27-309)
10 20 30 40
pF1KE5 MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTK
::::::::::::::::::::::::::::::::::
NP_001 MSWCNELRLPALKQHSIGRGLESHITMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTK
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE5 SCSGVEFSTSGSSNTDTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SCSGVEFSTSGSSNTDTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQG
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE5 LKLTFDTTFSPNTGKKSGKIKSSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKLTFDTTFSPNTGKKSGKIKSSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQ
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE5 MTFDSAKSKLTRNNFAVGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTFDSAKSKLTRNNFAVGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGT
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE5 NCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHK
250 260 270 280 290 300
290
pF1KE5 VGLALELEA
:::::::::
NP_001 VGLALELEA
>>NP_001311019 (OMIM: 193245) voltage-dependent anion-se (255 aa)
initn: 1616 init1: 1616 opt: 1616 Z-score: 2174.6 bits: 410.2 E(85289): 2.2e-114
Smith-Waterman score: 1616; 100.0% identity (100.0% similar) in 244 aa overlap (51-294:12-255)
30 40 50 60 70 80
pF1KE5 LGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVTGTLETKYKWCEYGL
::::::::::::::::::::::::::::::
NP_001 MLVIPATQEAEEFSTSGSSNTDTGKVTGTLETKYKWCEYGL
10 20 30 40
90 100 110 120 130 140
pF1KE5 TFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSSYKRECINLGCDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSSYKRECINLGCDV
50 60 70 80 90 100
150 160 170 180 190 200
pF1KE5 DFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDFQLHTNVNDGTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDFQLHTNVNDGTE
110 120 130 140 150 160
210 220 230 240 250 260
pF1KE5 FGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQ
170 180 190 200 210 220
270 280 290
pF1KE5 TLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
::::::::::::::::::::::::::::::::::
NP_001 TLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
230 240 250
>>NP_001311016 (OMIM: 193245) voltage-dependent anion-se (255 aa)
initn: 1616 init1: 1616 opt: 1616 Z-score: 2174.6 bits: 410.2 E(85289): 2.2e-114
Smith-Waterman score: 1616; 100.0% identity (100.0% similar) in 244 aa overlap (51-294:12-255)
30 40 50 60 70 80
pF1KE5 LGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVTGTLETKYKWCEYGL
::::::::::::::::::::::::::::::
NP_001 MLVIPATQEAEEFSTSGSSNTDTGKVTGTLETKYKWCEYGL
10 20 30 40
90 100 110 120 130 140
pF1KE5 TFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSSYKRECINLGCDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSSYKRECINLGCDV
50 60 70 80 90 100
150 160 170 180 190 200
pF1KE5 DFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDFQLHTNVNDGTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDFQLHTNVNDGTE
110 120 130 140 150 160
210 220 230 240 250 260
pF1KE5 FGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQ
170 180 190 200 210 220
270 280 290
pF1KE5 TLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
::::::::::::::::::::::::::::::::::
NP_001 TLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
230 240 250
>>NP_001311018 (OMIM: 193245) voltage-dependent anion-se (255 aa)
initn: 1616 init1: 1616 opt: 1616 Z-score: 2174.6 bits: 410.2 E(85289): 2.2e-114
Smith-Waterman score: 1616; 100.0% identity (100.0% similar) in 244 aa overlap (51-294:12-255)
30 40 50 60 70 80
pF1KE5 LGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVTGTLETKYKWCEYGL
::::::::::::::::::::::::::::::
NP_001 MLVIPATQEAEEFSTSGSSNTDTGKVTGTLETKYKWCEYGL
10 20 30 40
90 100 110 120 130 140
pF1KE5 TFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSSYKRECINLGCDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSSYKRECINLGCDV
50 60 70 80 90 100
150 160 170 180 190 200
pF1KE5 DFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDFQLHTNVNDGTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDFQLHTNVNDGTE
110 120 130 140 150 160
210 220 230 240 250 260
pF1KE5 FGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQ
170 180 190 200 210 220
270 280 290
pF1KE5 TLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
::::::::::::::::::::::::::::::::::
NP_001 TLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
230 240 250
>>XP_005272132 (OMIM: 604492) PREDICTED: voltage-depende (283 aa)
initn: 1510 init1: 1474 opt: 1484 Z-score: 1996.5 bits: 377.3 E(85289): 1.8e-104
Smith-Waterman score: 1484; 74.6% identity (95.4% similar) in 283 aa overlap (12-294:1-283)
10 20 30 40 50 60
pF1KE5 MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT
: .::.::::::.:::.:.::.::::.:::.:::: .:.::..:::.::
XP_005 MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANT
10 20 30 40
70 80 90 100 110 120
pF1KE5 DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK
.: ::::.:::::.: ::::::::::::::::::::..:::. .:::::::..:::::::
XP_005 ETTKVTGSLETKYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGK
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE5 KSGKIKSSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNF
:..:::..:::: ::::::.:::.:::.:.:. :.:::::::::::.:..:::..:..::
XP_005 KNAKIKTGYKREHINLGCDMDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNF
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE5 AVGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDP
::::.: .::::::::::::::::::::: . :.:.::::::.:.. ::::::::::.::
XP_005 AVGYKTDEFQLHTNVNDGTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIAAKYQIDP
170 180 190 200 210 220
250 260 270 280 290
pF1KE5 TASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
: .:::::::::::.::::::.::.:::::::.:::..::::::.::.::..:
XP_005 DACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGLEFQA
230 240 250 260 270 280
>>XP_016865310 (OMIM: 604492) PREDICTED: voltage-depende (283 aa)
initn: 1510 init1: 1474 opt: 1484 Z-score: 1996.5 bits: 377.3 E(85289): 1.8e-104
Smith-Waterman score: 1484; 74.6% identity (95.4% similar) in 283 aa overlap (12-294:1-283)
10 20 30 40 50 60
pF1KE5 MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT
: .::.::::::.:::.:.::.::::.:::.:::: .:.::..:::.::
XP_016 MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANT
10 20 30 40
70 80 90 100 110 120
pF1KE5 DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK
.: ::::.:::::.: ::::::::::::::::::::..:::. .:::::::..:::::::
XP_016 ETTKVTGSLETKYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGK
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE5 KSGKIKSSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNF
:..:::..:::: ::::::.:::.:::.:.:. :.:::::::::::.:..:::..:..::
XP_016 KNAKIKTGYKREHINLGCDMDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNF
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE5 AVGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDP
::::.: .::::::::::::::::::::: . :.:.::::::.:.. ::::::::::.::
XP_016 AVGYKTDEFQLHTNVNDGTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIAAKYQIDP
170 180 190 200 210 220
250 260 270 280 290
pF1KE5 TASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
: .:::::::::::.::::::.::.:::::::.:::..::::::.::.::..:
XP_016 DACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGLEFQA
230 240 250 260 270 280
>>XP_016865311 (OMIM: 604492) PREDICTED: voltage-depende (283 aa)
initn: 1510 init1: 1474 opt: 1484 Z-score: 1996.5 bits: 377.3 E(85289): 1.8e-104
Smith-Waterman score: 1484; 74.6% identity (95.4% similar) in 283 aa overlap (12-294:1-283)
10 20 30 40 50 60
pF1KE5 MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT
: .::.::::::.:::.:.::.::::.:::.:::: .:.::..:::.::
XP_016 MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANT
10 20 30 40
70 80 90 100 110 120
pF1KE5 DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK
.: ::::.:::::.: ::::::::::::::::::::..:::. .:::::::..:::::::
XP_016 ETTKVTGSLETKYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGK
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE5 KSGKIKSSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNF
:..:::..:::: ::::::.:::.:::.:.:. :.:::::::::::.:..:::..:..::
XP_016 KNAKIKTGYKREHINLGCDMDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNF
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE5 AVGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDP
::::.: .::::::::::::::::::::: . :.:.::::::.:.. ::::::::::.::
XP_016 AVGYKTDEFQLHTNVNDGTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIAAKYQIDP
170 180 190 200 210 220
250 260 270 280 290
pF1KE5 TASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA
: .:::::::::::.::::::.::.:::::::.:::..::::::.::.::..:
XP_016 DACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGLEFQA
230 240 250 260 270 280
294 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 00:03:53 2016 done: Tue Nov 8 00:03:54 2016
Total Scan time: 4.630 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]