Result of FASTA (omim) for
pFN21AE5351
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5351, 306 aa
1>>>pF1KE5351 306 - 306 aa - 306 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4474+/-0.000278; mu= 12.5211+/- 0.018
mean_var=111.4671+/-22.248, 0's: 0 Z-trim(121.7): 43 B-trim: 147 in 1/54
Lambda= 0.121479
statistics sampled from 38542 (38585) to 38542 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.777), E-opt: 0.2 (0.452), width: 16
Scan time: 6.460
The best scores are: opt bits E(85289)
NP_997545 (OMIM: 613279,617125) zinc finger CCCH d ( 306) 2148 386.3 4.2e-107
NP_001313233 (OMIM: 613279,617125) zinc finger CCC ( 449) 1339 244.6 2.7e-64
XP_005268127 (OMIM: 613279,617125) PREDICTED: zinc ( 604) 1339 244.7 3.4e-64
NP_001313237 (OMIM: 613279,617125) zinc finger CCC ( 450) 1327 242.5 1.2e-63
NP_997544 (OMIM: 613279,617125) zinc finger CCCH d ( 571) 1327 242.6 1.4e-63
XP_005268126 (OMIM: 613279,617125) PREDICTED: zinc ( 605) 1327 242.6 1.5e-63
NP_001313224 (OMIM: 613279,617125) zinc finger CCC ( 605) 1327 242.6 1.5e-63
NP_001313243 (OMIM: 613279,617125) zinc finger CCC ( 555) 1206 221.4 3.3e-57
NP_001313231 (OMIM: 613279,617125) zinc finger CCC ( 580) 1206 221.4 3.4e-57
NP_001313245 (OMIM: 613279,617125) zinc finger CCC ( 701) 1206 221.4 4e-57
NP_001313244 (OMIM: 613279,617125) zinc finger CCC ( 701) 1206 221.4 4e-57
XP_016877137 (OMIM: 613279,617125) PREDICTED: zinc ( 710) 1206 221.5 4e-57
NP_001313225 (OMIM: 613279,617125) zinc finger CCC ( 710) 1206 221.5 4e-57
NP_001153575 (OMIM: 613279,617125) zinc finger CCC ( 735) 1206 221.5 4.1e-57
NP_001313235 (OMIM: 613279,617125) zinc finger CCC ( 527) 1200 220.3 6.6e-57
NP_001313228 (OMIM: 613279,617125) zinc finger CCC ( 705) 1198 220.0 1.1e-56
XP_016877139 (OMIM: 613279,617125) PREDICTED: zinc ( 705) 1198 220.0 1.1e-56
NP_001153576 (OMIM: 613279,617125) zinc finger CCC ( 730) 1198 220.1 1.1e-56
NP_001313240 (OMIM: 613279,617125) zinc finger CCC ( 424) 1194 219.2 1.2e-56
NP_001313232 (OMIM: 613279,617125) zinc finger CCC ( 545) 1194 219.3 1.4e-56
NP_001313234 (OMIM: 613279,617125) zinc finger CCC ( 556) 1194 219.3 1.4e-56
NP_997543 (OMIM: 613279,617125) zinc finger CCCH d ( 579) 1194 219.3 1.5e-56
NP_001313229 (OMIM: 613279,617125) zinc finger CCC ( 581) 1194 219.3 1.5e-56
NP_001313230 (OMIM: 613279,617125) zinc finger CCC ( 677) 1194 219.3 1.7e-56
XP_011535463 (OMIM: 613279,617125) PREDICTED: zinc ( 684) 1194 219.3 1.7e-56
XP_011535462 (OMIM: 613279,617125) PREDICTED: zinc ( 702) 1194 219.3 1.7e-56
NP_001313226 (OMIM: 613279,617125) zinc finger CCC ( 702) 1194 219.3 1.7e-56
XP_005268125 (OMIM: 613279,617125) PREDICTED: zinc ( 711) 1194 219.4 1.7e-56
NP_001313236 (OMIM: 613279,617125) zinc finger CCC ( 711) 1194 219.4 1.7e-56
NP_079100 (OMIM: 613279,617125) zinc finger CCCH d ( 736) 1194 219.4 1.8e-56
NP_001313242 (OMIM: 613279,617125) zinc finger CCC ( 528) 1188 218.2 2.8e-56
XP_016877138 (OMIM: 613279,617125) PREDICTED: zinc ( 706) 1186 217.9 4.5e-56
NP_001313241 (OMIM: 613279,617125) zinc finger CCC ( 706) 1186 217.9 4.5e-56
NP_001313239 (OMIM: 613279,617125) zinc finger CCC ( 731) 1186 218.0 4.7e-56
XP_005268124 (OMIM: 613279,617125) PREDICTED: zinc ( 731) 1186 218.0 4.7e-56
NP_001313238 (OMIM: 613279,617125) zinc finger CCC ( 425) 1182 217.1 5e-56
XP_005268128 (OMIM: 613279,617125) PREDICTED: zinc ( 580) 1182 217.2 6.3e-56
NP_001313227 (OMIM: 613279,617125) zinc finger CCC ( 580) 1182 217.2 6.3e-56
XP_005268130 (OMIM: 613279,617125) PREDICTED: zinc ( 438) 970 179.9 7.8e-45
XP_006720320 (OMIM: 613279,617125) PREDICTED: zinc ( 413) 813 152.4 1.4e-36
>>NP_997545 (OMIM: 613279,617125) zinc finger CCCH domai (306 aa)
initn: 2148 init1: 2148 opt: 2148 Z-score: 2043.9 bits: 386.3 E(85289): 4.2e-107
Smith-Waterman score: 2148; 100.0% identity (100.0% similar) in 306 aa overlap (1-306:1-306)
10 20 30 40 50 60
pF1KE5 MRMSSKFPSPPLPIFLPPEPVDLGSITSSSCSLNELDNISHLLRKISADINEIKGMKAAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 MRMSSKFPSPPLPIFLPPEPVDLGSITSSSCSLNELDNISHLLRKISADINEIKGMKAAI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 LTVEANLFDLNVRVSKNEAKISSLEVKMNEYSTTYECNRQFEDQEEDTESQSRTTDVKII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 LTVEANLFDLNVRVSKNEAKISSLEVKMNEYSTTYECNRQFEDQEEDTESQSRTTDVKII
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 GFLRNVEKGTQQRQLLSRLQIDPVMAETLQMSQAEMSELSVAQKPEKLLERCKYWPACKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 GFLRNVEKGTQQRQLLSRLQIDPVMAETLQMSQAEMSELSVAQKPEKLLERCKYWPACKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 GDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRRIPVLSPKPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 GDECAYHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRRIPVLSPKPV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 APPAPPSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTINVPPRHALKWI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 APPAPPSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTINVPPRHALKWI
250 260 270 280 290 300
pF1KE5 RPQTSE
::::::
NP_997 RPQTSE
>>NP_001313233 (OMIM: 613279,617125) zinc finger CCCH do (449 aa)
initn: 1337 init1: 1337 opt: 1339 Z-score: 1275.3 bits: 244.6 E(85289): 2.7e-64
Smith-Waterman score: 1339; 98.4% identity (98.9% similar) in 184 aa overlap (125-306:266-449)
100 110 120 130 140 150
pF1KE5 YECNRQFEDQEEDTESQSRTTDVKIIGFLRNVEK--GTQQRQLLSRLQIDPVMAETLQMS
.::: ::::::::::::::::::::::::
NP_001 QEELLAEVVQGQSRTPRISPPIKEEETKGDSVEKNQGTQQRQLLSRLQIDPVMAETLQMS
240 250 260 270 280 290
160 170 180 190 200 210
pF1KE5 QAEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QAEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNC
300 310 320 330 340 350
220 230 240 250 260 270
pF1KE5 KYDAKCTKPDCPFTHVSRRIPVLSPKPVAPPAPPSSSQLCRYFPACKKMECPFYHPKHCR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KYDAKCTKPDCPFTHVSRRIPVLSPKPVAPPAPPSSSQLCRYFPACKKMECPFYHPKHCR
360 370 380 390 400 410
280 290 300
pF1KE5 FNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE
::::::::::::::::::::::::::::::::::
NP_001 FNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE
420 430 440
>>XP_005268127 (OMIM: 613279,617125) PREDICTED: zinc fin (604 aa)
initn: 1337 init1: 1337 opt: 1339 Z-score: 1273.5 bits: 244.7 E(85289): 3.4e-64
Smith-Waterman score: 1339; 98.4% identity (98.9% similar) in 184 aa overlap (125-306:421-604)
100 110 120 130 140 150
pF1KE5 YECNRQFEDQEEDTESQSRTTDVKIIGFLRNVEK--GTQQRQLLSRLQIDPVMAETLQMS
.::: ::::::::::::::::::::::::
XP_005 QEELLAEVVQGQSRTPRISPPIKEEETKGDSVEKNQGTQQRQLLSRLQIDPVMAETLQMS
400 410 420 430 440 450
160 170 180 190 200 210
pF1KE5 QAEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QAEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNC
460 470 480 490 500 510
220 230 240 250 260 270
pF1KE5 KYDAKCTKPDCPFTHVSRRIPVLSPKPVAPPAPPSSSQLCRYFPACKKMECPFYHPKHCR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KYDAKCTKPDCPFTHVSRRIPVLSPKPVAPPAPPSSSQLCRYFPACKKMECPFYHPKHCR
520 530 540 550 560 570
280 290 300
pF1KE5 FNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE
::::::::::::::::::::::::::::::::::
XP_005 FNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE
580 590 600
>>NP_001313237 (OMIM: 613279,617125) zinc finger CCCH do (450 aa)
initn: 904 init1: 838 opt: 1327 Z-score: 1263.9 bits: 242.5 E(85289): 1.2e-63
Smith-Waterman score: 1327; 97.8% identity (98.4% similar) in 185 aa overlap (125-306:266-450)
100 110 120 130 140 150
pF1KE5 YECNRQFEDQEEDTESQSRTTDVKIIGFLRNVEK--GTQQRQLLSRLQIDPVMAETLQMS
.::: ::::::::::::::::::::::::
NP_001 QEELLAEVVQGQSRTPRISPPIKEEETKGDSVEKNQGTQQRQLLSRLQIDPVMAETLQMS
240 250 260 270 280 290
160 170 180 190 200 210
pF1KE5 QAEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QAEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNC
300 310 320 330 340 350
220 230 240 250 260 270
pF1KE5 KYDAKCTKPDCPFTHVSRRIPVLSPKP-VAPPAPPSSSQLCRYFPACKKMECPFYHPKHC
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::
NP_001 KYDAKCTKPDCPFTHVSRRIPVLSPKPAVAPPAPPSSSQLCRYFPACKKMECPFYHPKHC
360 370 380 390 400 410
280 290 300
pF1KE5 RFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE
:::::::::::::::::::::::::::::::::::
NP_001 RFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE
420 430 440 450
>>NP_997544 (OMIM: 613279,617125) zinc finger CCCH domai (571 aa)
initn: 904 init1: 838 opt: 1327 Z-score: 1262.5 bits: 242.6 E(85289): 1.4e-63
Smith-Waterman score: 1327; 97.8% identity (98.4% similar) in 185 aa overlap (125-306:387-571)
100 110 120 130 140 150
pF1KE5 YECNRQFEDQEEDTESQSRTTDVKIIGFLRNVEK--GTQQRQLLSRLQIDPVMAETLQMS
.::: ::::::::::::::::::::::::
NP_997 QEELLAEVVQGQSRTPRISPPIKEEETKGDSVEKNQGTQQRQLLSRLQIDPVMAETLQMS
360 370 380 390 400 410
160 170 180 190 200 210
pF1KE5 QAEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 QAEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNC
420 430 440 450 460 470
220 230 240 250 260 270
pF1KE5 KYDAKCTKPDCPFTHVSRRIPVLSPKP-VAPPAPPSSSQLCRYFPACKKMECPFYHPKHC
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::
NP_997 KYDAKCTKPDCPFTHVSRRIPVLSPKPAVAPPAPPSSSQLCRYFPACKKMECPFYHPKHC
480 490 500 510 520 530
280 290 300
pF1KE5 RFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE
:::::::::::::::::::::::::::::::::::
NP_997 RFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE
540 550 560 570
>>XP_005268126 (OMIM: 613279,617125) PREDICTED: zinc fin (605 aa)
initn: 904 init1: 838 opt: 1327 Z-score: 1262.1 bits: 242.6 E(85289): 1.5e-63
Smith-Waterman score: 1327; 97.8% identity (98.4% similar) in 185 aa overlap (125-306:421-605)
100 110 120 130 140 150
pF1KE5 YECNRQFEDQEEDTESQSRTTDVKIIGFLRNVEK--GTQQRQLLSRLQIDPVMAETLQMS
.::: ::::::::::::::::::::::::
XP_005 QEELLAEVVQGQSRTPRISPPIKEEETKGDSVEKNQGTQQRQLLSRLQIDPVMAETLQMS
400 410 420 430 440 450
160 170 180 190 200 210
pF1KE5 QAEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QAEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNC
460 470 480 490 500 510
220 230 240 250 260 270
pF1KE5 KYDAKCTKPDCPFTHVSRRIPVLSPKP-VAPPAPPSSSQLCRYFPACKKMECPFYHPKHC
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::
XP_005 KYDAKCTKPDCPFTHVSRRIPVLSPKPAVAPPAPPSSSQLCRYFPACKKMECPFYHPKHC
520 530 540 550 560 570
280 290 300
pF1KE5 RFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE
:::::::::::::::::::::::::::::::::::
XP_005 RFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE
580 590 600
>>NP_001313224 (OMIM: 613279,617125) zinc finger CCCH do (605 aa)
initn: 904 init1: 838 opt: 1327 Z-score: 1262.1 bits: 242.6 E(85289): 1.5e-63
Smith-Waterman score: 1327; 97.8% identity (98.4% similar) in 185 aa overlap (125-306:421-605)
100 110 120 130 140 150
pF1KE5 YECNRQFEDQEEDTESQSRTTDVKIIGFLRNVEK--GTQQRQLLSRLQIDPVMAETLQMS
.::: ::::::::::::::::::::::::
NP_001 QEELLAEVVQGQSRTPRISPPIKEEETKGDSVEKNQGTQQRQLLSRLQIDPVMAETLQMS
400 410 420 430 440 450
160 170 180 190 200 210
pF1KE5 QAEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QAEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKAFPNCKFAEKCLFVHPNC
460 470 480 490 500 510
220 230 240 250 260 270
pF1KE5 KYDAKCTKPDCPFTHVSRRIPVLSPKP-VAPPAPPSSSQLCRYFPACKKMECPFYHPKHC
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::
NP_001 KYDAKCTKPDCPFTHVSRRIPVLSPKPAVAPPAPPSSSQLCRYFPACKKMECPFYHPKHC
520 530 540 550 560 570
280 290 300
pF1KE5 RFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE
:::::::::::::::::::::::::::::::::::
NP_001 RFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE
580 590 600
>>NP_001313243 (OMIM: 613279,617125) zinc finger CCCH do (555 aa)
initn: 1213 init1: 1183 opt: 1206 Z-score: 1148.0 bits: 221.4 E(85289): 3.3e-57
Smith-Waterman score: 1210; 80.6% identity (86.7% similar) in 211 aa overlap (103-306:354-555)
80 90 100 110 120
pF1KE5 RVSKNEAKISSLEVKMNEYSTTYECNRQFEDQEEDTE-------SQSRTTDVKIIGFLRN
::::: .:. ... . :.:.
NP_001 TRDLVQPDKPASPKFIVTLDGVPSPPGYMSDQEEDMCFEGMKPVNQTAASNKGLRGLLH-
330 340 350 360 370 380
130 140 150 160 170 180
pF1KE5 VEKGTQQRQLLSRLQIDPVMAETLQMSQAEMSELSVAQKPEKLLERCKYWPACKNGDECA
:: .:::: :: . ..:.::::::::::::::::::::::::::::::::
NP_001 ----PQQLHLLSRQLEDP----NGSFSNAEMSELSVAQKPEKLLERCKYWPACKNGDECA
390 400 410 420 430
190 200 210 220 230 240
pF1KE5 YHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRRIPVLSPKPVAPPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRRIPVLSPKPVAPPAP
440 450 460 470 480 490
250 260 270 280 290 300
pF1KE5 PSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTS
500 510 520 530 540 550
pF1KE5 E
:
NP_001 E
>>NP_001313231 (OMIM: 613279,617125) zinc finger CCCH do (580 aa)
initn: 1183 init1: 1183 opt: 1206 Z-score: 1147.8 bits: 221.4 E(85289): 3.4e-57
Smith-Waterman score: 1210; 80.6% identity (86.7% similar) in 211 aa overlap (103-306:379-580)
80 90 100 110 120
pF1KE5 RVSKNEAKISSLEVKMNEYSTTYECNRQFEDQEEDTE-------SQSRTTDVKIIGFLRN
::::: .:. ... . :.:.
NP_001 TRDLVQPDKPASPKFIVTLDGVPSPPGYMSDQEEDMCFEGMKPVNQTAASNKGLRGLLH-
350 360 370 380 390 400
130 140 150 160 170 180
pF1KE5 VEKGTQQRQLLSRLQIDPVMAETLQMSQAEMSELSVAQKPEKLLERCKYWPACKNGDECA
:: .:::: :: . ..:.::::::::::::::::::::::::::::::::
NP_001 ----PQQLHLLSRQLEDP----NGSFSNAEMSELSVAQKPEKLLERCKYWPACKNGDECA
410 420 430 440 450
190 200 210 220 230 240
pF1KE5 YHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRRIPVLSPKPVAPPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRRIPVLSPKPVAPPAP
460 470 480 490 500 510
250 260 270 280 290 300
pF1KE5 PSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTS
520 530 540 550 560 570
pF1KE5 E
:
NP_001 E
580
>>NP_001313245 (OMIM: 613279,617125) zinc finger CCCH do (701 aa)
initn: 1183 init1: 1183 opt: 1206 Z-score: 1146.6 bits: 221.4 E(85289): 4e-57
Smith-Waterman score: 1210; 80.6% identity (86.7% similar) in 211 aa overlap (103-306:500-701)
80 90 100 110 120
pF1KE5 RVSKNEAKISSLEVKMNEYSTTYECNRQFEDQEEDTE-------SQSRTTDVKIIGFLRN
::::: .:. ... . :.:.
NP_001 TRDLVQPDKPASPKFIVTLDGVPSPPGYMSDQEEDMCFEGMKPVNQTAASNKGLRGLLH-
470 480 490 500 510 520
130 140 150 160 170 180
pF1KE5 VEKGTQQRQLLSRLQIDPVMAETLQMSQAEMSELSVAQKPEKLLERCKYWPACKNGDECA
:: .:::: :: . ..:.::::::::::::::::::::::::::::::::
NP_001 ----PQQLHLLSRQLEDP----NGSFSNAEMSELSVAQKPEKLLERCKYWPACKNGDECA
530 540 550 560 570 580
190 200 210 220 230 240
pF1KE5 YHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRRIPVLSPKPVAPPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YHHPISPCKAFPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRRIPVLSPKPVAPPAP
590 600 610 620 630 640
250 260 270 280 290 300
pF1KE5 PSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSSSQLCRYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTS
650 660 670 680 690 700
pF1KE5 E
:
NP_001 E
306 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 00:01:55 2016 done: Tue Nov 8 00:01:56 2016
Total Scan time: 6.460 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]