Result of FASTA (ccds) for
pFN21AE5316
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5316, 285 aa
1>>>pF1KE5316 285 - 285 aa - 285 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.4161+/-0.00113; mu= -10.1051+/- 0.068
mean_var=408.0145+/-82.847, 0's: 0 Z-trim(113.3): 42 B-trim: 14 in 1/54
Lambda= 0.063495
statistics sampled from 13940 (13975) to 13940 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.724), E-opt: 0.2 (0.429), width: 16
Scan time: 1.980
The best scores are: opt bits E(32554)
CCDS30968.1 TNNT2 gene_id:7139|Hs108|chr1 ( 285) 1825 180.6 1.2e-45
CCDS30969.1 TNNT2 gene_id:7139|Hs108|chr1 ( 288) 1809 179.1 3.3e-45
CCDS73002.1 TNNT2 gene_id:7139|Hs108|chr1 ( 282) 1764 175.0 5.6e-44
CCDS73003.1 TNNT2 gene_id:7139|Hs108|chr1 ( 298) 1700 169.1 3.4e-42
CCDS46185.1 TNNT1 gene_id:7138|Hs108|chr19 ( 251) 1055 110.0 1.8e-24
CCDS59421.1 TNNT1 gene_id:7138|Hs108|chr19 ( 262) 1055 110.0 1.9e-24
CCDS60390.1 TNNT2 gene_id:7139|Hs108|chr1 ( 255) 1048 109.3 2.9e-24
CCDS41594.1 TNNT3 gene_id:7140|Hs108|chr11 ( 256) 1000 104.9 6.1e-23
CCDS7727.1 TNNT3 gene_id:7140|Hs108|chr11 ( 258) 997 104.7 7.4e-23
CCDS41596.1 TNNT3 gene_id:7140|Hs108|chr11 ( 250) 994 104.4 8.8e-23
CCDS41595.1 TNNT3 gene_id:7140|Hs108|chr11 ( 250) 968 102.0 4.6e-22
CCDS12917.1 TNNT1 gene_id:7138|Hs108|chr19 ( 278) 833 89.7 2.6e-18
>>CCDS30968.1 TNNT2 gene_id:7139|Hs108|chr1 (285 aa)
initn: 1825 init1: 1825 opt: 1825 Z-score: 933.1 bits: 180.6 E(32554): 1.2e-45
Smith-Waterman score: 1825; 100.0% identity (100.0% similar) in 285 aa overlap (1-285:1-285)
10 20 30 40 50 60
pF1KE5 MSDIEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MSDIEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 EESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 EESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 VSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 MMHFGGYIQKTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MMHFGGYIQKTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYNL
190 200 210 220 230 240
250 260 270 280
pF1KE5 EAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
:::::::::::::::::::::::::::::::::::::::::::::
CCDS30 EAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
250 260 270 280
>>CCDS30969.1 TNNT2 gene_id:7139|Hs108|chr1 (288 aa)
initn: 1217 init1: 1217 opt: 1809 Z-score: 925.2 bits: 179.1 E(32554): 3.3e-45
Smith-Waterman score: 1809; 99.0% identity (99.0% similar) in 288 aa overlap (1-285:1-288)
10 20 30 40 50 60
pF1KE5 MSDIEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MSDIEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 EESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 EESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEEL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 VSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 VSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSN
130 140 150 160 170 180
190 200 210 220 230
pF1KE5 MMHFGGYIQK---TERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSI
:::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MMHFGGYIQKQAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSI
190 200 210 220 230 240
240 250 260 270 280
pF1KE5 YNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 YNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
250 260 270 280
>>CCDS73002.1 TNNT2 gene_id:7139|Hs108|chr1 (282 aa)
initn: 1130 init1: 1130 opt: 1764 Z-score: 903.0 bits: 175.0 E(32554): 5.6e-44
Smith-Waterman score: 1764; 97.6% identity (97.6% similar) in 287 aa overlap (1-285:1-282)
10 20 30 40 50 60
pF1KE5 MSDIEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
:::::::::::::::::: :::::::::::::::::::::::::::::::::::::
CCDS73 MSDIEEVVEEYEEEEQEE-----QEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 EESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEEL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE5 VSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSN
120 130 140 150 160 170
190 200 210 220 230
pF1KE5 MMHFGGYIQK--TERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIY
:::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MMHFGGYIQKAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIY
180 190 200 210 220 230
240 250 260 270 280
pF1KE5 NLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 NLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
240 250 260 270 280
>>CCDS73003.1 TNNT2 gene_id:7139|Hs108|chr1 (298 aa)
initn: 1103 init1: 1103 opt: 1700 Z-score: 871.0 bits: 169.1 E(32554): 3.4e-42
Smith-Waterman score: 1779; 95.6% identity (95.6% similar) in 298 aa overlap (1-285:1-298)
10 20 30 40 50
pF1KE5 MSDIEEVVEEYEEEEQEEAAVEE----------QEEAAEEDAEAEAETEETRAEEDEEEE
::::::::::::::::::::::: :::::::::::::::::::::::::::
CCDS73 MSDIEEVVEEYEEEEQEEAAVEEEEDWREDEDEQEEAAEEDAEAEAETEETRAEEDEEEE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 EAKEAEDGPMEESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EAKEAEDGPMEESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE5 ENRKKEEEELVSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ENRKKEEEELVSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAED
130 140 150 160 170 180
180 190 200 210 220
pF1KE5 EARKKKALSNMMHFGGYIQK---TERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLR
:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::
CCDS73 EARKKKALSNMMHFGGYIQKQAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLR
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE5 EKAKELWQSIYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EKAKELWQSIYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
250 260 270 280 290
>>CCDS46185.1 TNNT1 gene_id:7138|Hs108|chr19 (251 aa)
initn: 612 init1: 612 opt: 1055 Z-score: 552.7 bits: 110.0 E(32554): 1.8e-24
Smith-Waterman score: 1055; 65.5% identity (85.3% similar) in 252 aa overlap (36-285:2-251)
10 20 30 40 50 60
pF1KE5 EVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPMEESKP
..::: . ::.. :::: : :. :: .:
CCDS46 MSDTEEQEYEEEQPEEEAAEEEE--EEEERP
10 20
70 80 90 100 110 120
pF1KE5 KP-RSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEELVSLK
:: : .: :.:::::.:::::::::::::::::: :::.::..:::.:::::::::.::
CCDS46 KPSRPVVPPLIPPKIPEGERVDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALK
30 40 50 60 70 80
130 140 150 160 170 180
pF1KE5 DRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSNM-MH
.::::::.:::::::.:.:.:.::: .::::. :.:::: ...:::.:.:::.:::: :
CCDS46 ERIERRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAH
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE5 FGGYIQKTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYNLEAE
::::. :.:.: ::::: :: : .::.::.: : ::...:.::::::.:: . :..::.:
CCDS46 FGGYLVKAEQKRGKRQTGREMKVRILSERKKPLDIDYMGEEQLREKAQELSDWIHQLESE
150 160 170 180 190 200
250 260 270 280
pF1KE5 KFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
::::. :.:::::::::: :::. :: : ::..: ::::
CCDS46 KFDLMAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
210 220 230 240 250
>>CCDS59421.1 TNNT1 gene_id:7138|Hs108|chr19 (262 aa)
initn: 645 init1: 645 opt: 1055 Z-score: 552.4 bits: 110.0 E(32554): 1.9e-24
Smith-Waterman score: 1063; 62.0% identity (78.4% similar) in 287 aa overlap (1-285:1-262)
10 20 30 40 50 60
pF1KE5 MSDIEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
::: :: .:::::. :: :.::.::: :: : :: :: :
CCDS59 MSDTEE--QEYEEEQPEEEAAEEEEEAPEEP-EPVAEPEEER------------------
10 20 30
70 80 90 100 110
pF1KE5 EESKPKP-RSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEE
::: : .: :.:::::.:::::::::::::::::: :::.::..:::.:::::::
CCDS59 ----PKPSRPVVPPLIPPKIPEGERVDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEE
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE5 LVSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALS
::.::.::::::.:::::::.:.:.:.::: .::::. :.:::: ...:::.:.:::.::
CCDS59 LVALKERIERRRSERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKKKVLS
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE5 NM-MHFGGYIQKTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIY
:: :::::. :.:.: ::::: :: : .::.::.: : ::...:.::::::.:: . :.
CCDS59 NMGAHFGGYLVKAEQKRGKRQTGREMKVRILSERKKPLDIDYMGEEQLREKAQELSDWIH
160 170 180 190 200 210
240 250 260 270 280
pF1KE5 NLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
.::.:::::. :.:::::::::: :::. :: : ::..: ::::
CCDS59 QLESEKFDLMAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK
220 230 240 250 260
>>CCDS60390.1 TNNT2 gene_id:7139|Hs108|chr1 (255 aa)
initn: 1194 init1: 1013 opt: 1048 Z-score: 549.1 bits: 109.3 E(32554): 2.9e-24
Smith-Waterman score: 1443; 83.1% identity (83.1% similar) in 295 aa overlap (1-285:1-255)
10 20 30 40 50
pF1KE5 MSDIEEVVEEYEEEEQEEAAVEE----------QEEAAEEDAEAEAETEETRAEEDEEEE
::::::::::::::::::::::: ::::::::::::::::::::: :::::
CCDS60 MSDIEEVVEEYEEEEQEEAAVEEEEDWREDEDEQEEAAEEDAEAEAETEETRAE-DEEEE
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 EAKEAEDGPMEESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHF
::::::::::::::::::::::::::::::::::::::
CCDS60 EAKEAEDGPMEESKPKPRSFMPNLVPPKIPDGERVDFD----------------------
60 70 80 90
120 130 140 150 160 170
pF1KE5 ENRKKEEEELVSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAED
:::::::::::::::::::::::::::::::::::::::::::
CCDS60 -----------------ERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAED
100 110 120 130 140
180 190 200 210 220 230
pF1KE5 EARKKKALSNMMHFGGYIQKTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 EARKKKALSNMMHFGGYIQKTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKA
150 160 170 180 190 200
240 250 260 270 280
pF1KE5 KELWQSIYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 KELWQSIYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRGKAKVTGRWK
210 220 230 240 250
>>CCDS41594.1 TNNT3 gene_id:7140|Hs108|chr11 (256 aa)
initn: 1004 init1: 591 opt: 1000 Z-score: 525.3 bits: 104.9 E(32554): 6.1e-23
Smith-Waterman score: 1000; 61.4% identity (85.3% similar) in 259 aa overlap (31-285:3-256)
10 20 30 40 50 60
pF1KE5 MSDIEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
: :.: ..:: ::.: .::: :... .
CCDS41 MSDEEVE-QVEEQYEEEEEAQEEAAEVHE-EV
10 20 30
70 80 90 100 110 120
pF1KE5 EESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEEL
.: . ::: :.:. ::::.::.::::::..::..::: ::::::..::: ::::::::
CCDS41 HEPEEKPR---PKLTAPKIPEGEKVDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEEL
40 50 60 70 80
130 140 150 160 170 180
pF1KE5 VSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSN
:.::.:::.:::::::::::: :.:.:::::::::.::::::. .:.:::. .::::::.
CCDS41 VALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSS
90 100 110 120 130 140
190 200 210 220 230
pF1KE5 M-MHFGGYIQKTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYN
: ....:. :...: ::.:: :: :::::::::: : ::::.::.::.::::::.....
CCDS41 MGANYSSYLAKADQKRGKKQTAREMKKKILAERRKPLNIDHLGEDKLRDKAKELWETLHQ
150 160 170 180 190 200
240 250 260 270 280
pF1KE5 LEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRG---KAKVTGRWK
:: .::.. ::.:.:::.:..::.::.. :: :: : :.:: ::::
CCDS41 LEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAGTPAKGKVGGRWK
210 220 230 240 250
>>CCDS7727.1 TNNT3 gene_id:7140|Hs108|chr11 (258 aa)
initn: 994 init1: 573 opt: 997 Z-score: 523.8 bits: 104.7 E(32554): 7.4e-23
Smith-Waterman score: 1004; 60.1% identity (79.9% similar) in 278 aa overlap (12-285:4-258)
10 20 30 40 50 60
pF1KE5 MSDIEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPM
:: :: : ::.::: ::. :..: :::: :::
CCDS77 MSDEEVEQVEEQYEEEEEAQEEE-----EVQEDTAEEDAEEE----------
10 20 30
70 80 90 100 110 120
pF1KE5 EESKPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEEL
::: :.:. ::::.::.::::::..::..::: ::::::..::: ::::::::
CCDS77 -----KPR---PKLTAPKIPEGEKVDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEEL
40 50 60 70 80
130 140 150 160 170 180
pF1KE5 VSLKDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSN
:.::.:::.:::::::::::: :.:.:::::::::.::::::. .:.:::. .::::::.
CCDS77 VALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSS
90 100 110 120 130 140
190 200 210 220 230
pF1KE5 M-MHFGGYIQKTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYN
: ....:. :...: ::.:: :: :::::::::: : ::::.::.::.::::::.....
CCDS77 MGANYSSYLAKADQKRGKKQTAREMKKKILAERRKPLNIDHLGEDKLRDKAKELWETLHQ
150 160 170 180 190 200
240 250 260 270 280
pF1KE5 LEAEKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRG---KAKVTGRWK
:: .::.. ::.:.:::.:..::.::.. :: :: : :.:: ::::
CCDS77 LEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAGTPAKGKVGGRWK
210 220 230 240 250
>>CCDS41596.1 TNNT3 gene_id:7140|Hs108|chr11 (250 aa)
initn: 984 init1: 581 opt: 994 Z-score: 522.5 bits: 104.4 E(32554): 8.8e-23
Smith-Waterman score: 994; 61.7% identity (85.9% similar) in 256 aa overlap (34-285:2-250)
10 20 30 40 50 60
pF1KE5 IEEVVEEYEEEEQEEAAVEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPMEES
.. :.:... :. ::::::.: :. .::
CCDS41 MSDEEVEQVE-EQYEEEEEAQEEEE-VQEEE
10 20
70 80 90 100 110 120
pF1KE5 KPKPRSFMPNLVPPKIPDGERVDFDDIHRKRMEKDLNELQALIEAHFENRKKEEEELVSL
::.:. :. ::::.::.::::::..::..::: ::::::..::: :::::::::.:
CCDS41 KPRPK-----LTAPKIPEGEKVDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEELVAL
30 40 50 60 70 80
130 140 150 160 170 180
pF1KE5 KDRIERRRAERAEQQRIRNEREKERQNRLAEERARREEEENRRKAEDEARKKKALSNM-M
:.:::.:::::::::::: :.:.:::::::::.::::::. .:.:::. .::::::.:
CCDS41 KERIEKRRAERAEQQRIRAEKERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGA
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE5 HFGGYIQKTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYNLEA
....:. :...: ::.:: :: :::::::::: : ::::.::.::.::::::.....::
CCDS41 NYSSYLAKADQKRGKKQTAREMKKKILAERRKPLNIDHLGEDKLRDKAKELWETLHQLEI
150 160 170 180 190 200
250 260 270 280
pF1KE5 EKFDLQEKFKQQKYEINVLRNRINDNQKVSKTRG---KAKVTGRWK
.::.. ::.:.:::.:..::.::.. :: :: : :.:: ::::
CCDS41 DKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAGTPAKGKVGGRWK
210 220 230 240 250
285 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 23:44:42 2016 done: Mon Nov 7 23:44:42 2016
Total Scan time: 1.980 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]