Result of FASTA (omim) for
pFN21AE5309
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5309, 275 aa
1>>>pF1KE5309 275 - 275 aa - 275 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0992+/-0.000276; mu= 12.9573+/- 0.017
mean_var=101.1886+/-20.109, 0's: 0 Z-trim(121.4): 199 B-trim: 275 in 1/51
Lambda= 0.127499
statistics sampled from 37627 (37888) to 37627 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.793), E-opt: 0.2 (0.444), width: 16
Scan time: 6.580
The best scores are: opt bits E(85289)
NP_115723 (OMIM: 609601) zinc finger protein 397 i ( 275) 1874 354.2 1.5e-97
XP_016881531 (OMIM: 609601) PREDICTED: zinc finger ( 534) 1475 281.1 3.1e-75
XP_011524533 (OMIM: 609601) PREDICTED: zinc finger ( 534) 1475 281.1 3.1e-75
NP_001128650 (OMIM: 609601) zinc finger protein 39 ( 534) 1475 281.1 3.1e-75
XP_011524532 (OMIM: 609601) PREDICTED: zinc finger ( 553) 944 183.4 8.1e-46
XP_011524531 (OMIM: 609601) PREDICTED: zinc finger ( 553) 944 183.4 8.1e-46
XP_006722621 (OMIM: 609601) PREDICTED: zinc finger ( 553) 944 183.4 8.1e-46
XP_011513109 (OMIM: 610794) PREDICTED: zinc finger ( 406) 676 134.0 4.4e-31
XP_005249353 (OMIM: 610794) PREDICTED: zinc finger ( 406) 676 134.0 4.4e-31
XP_005249352 (OMIM: 610794) PREDICTED: zinc finger ( 406) 676 134.0 4.4e-31
NP_665916 (OMIM: 610794) zinc finger and SCAN doma ( 406) 676 134.0 4.4e-31
XP_011513111 (OMIM: 610794) PREDICTED: zinc finger ( 406) 676 134.0 4.4e-31
NP_112161 (OMIM: 610794) zinc finger and SCAN doma ( 406) 676 134.0 4.4e-31
XP_016866685 (OMIM: 610794) PREDICTED: zinc finger ( 406) 676 134.0 4.4e-31
XP_011513114 (OMIM: 610794) PREDICTED: zinc finger ( 406) 676 134.0 4.4e-31
XP_011513115 (OMIM: 610794) PREDICTED: zinc finger ( 406) 676 134.0 4.4e-31
XP_011513113 (OMIM: 610794) PREDICTED: zinc finger ( 406) 676 134.0 4.4e-31
XP_011513110 (OMIM: 610794) PREDICTED: zinc finger ( 406) 676 134.0 4.4e-31
NP_001128687 (OMIM: 610794) zinc finger and SCAN d ( 406) 676 134.0 4.4e-31
NP_001128688 (OMIM: 610794) zinc finger and SCAN d ( 406) 676 134.0 4.4e-31
NP_001230170 (OMIM: 610794) zinc finger and SCAN d ( 406) 676 134.0 4.4e-31
NP_443155 (OMIM: 615254) SCAN domain-containing pr (1325) 650 129.6 3e-29
NP_001333508 (OMIM: 601260) zinc finger protein wi ( 321) 589 117.9 2.4e-26
XP_011514861 (OMIM: 601260) PREDICTED: zinc finger ( 563) 589 118.1 3.7e-26
NP_003430 (OMIM: 601260) zinc finger protein with ( 563) 589 118.1 3.7e-26
NP_001333510 (OMIM: 601260) zinc finger protein wi ( 563) 589 118.1 3.7e-26
XP_016868074 (OMIM: 601261) PREDICTED: zinc finger ( 450) 583 116.9 6.7e-26
NP_666019 (OMIM: 601261) zinc finger and SCAN doma ( 473) 583 116.9 7e-26
XP_016868073 (OMIM: 601261) PREDICTED: zinc finger ( 473) 583 116.9 7e-26
XP_005250625 (OMIM: 601261) PREDICTED: zinc finger ( 473) 583 116.9 7e-26
XP_006716176 (OMIM: 601261) PREDICTED: zinc finger ( 473) 583 116.9 7e-26
XP_011513319 (OMIM: 603978) PREDICTED: zinc finger ( 565) 581 116.6 1e-25
XP_011513316 (OMIM: 603978) PREDICTED: zinc finger ( 611) 581 116.7 1.1e-25
XP_011513317 (OMIM: 603978) PREDICTED: zinc finger ( 611) 581 116.7 1.1e-25
XP_016867017 (OMIM: 603978) PREDICTED: zinc finger ( 611) 581 116.7 1.1e-25
NP_001156863 (OMIM: 603978) zinc finger and SCAN d ( 611) 581 116.7 1.1e-25
NP_001307883 (OMIM: 616463) zinc finger protein 23 ( 417) 572 114.9 2.6e-25
NP_001307882 (OMIM: 616463) zinc finger protein 23 ( 417) 572 114.9 2.6e-25
NP_055334 (OMIM: 616463) zinc finger protein 232 i ( 444) 572 114.9 2.7e-25
XP_016880510 (OMIM: 616463) PREDICTED: zinc finger ( 444) 572 114.9 2.7e-25
NP_001186409 (OMIM: 602246) zinc finger and SCAN d ( 394) 562 113.0 8.8e-25
XP_016866756 (OMIM: 602246) PREDICTED: zinc finger ( 394) 562 113.0 8.8e-25
NP_006290 (OMIM: 602246) zinc finger and SCAN doma ( 394) 562 113.0 8.8e-25
XP_011513180 (OMIM: 602246) PREDICTED: zinc finger ( 526) 562 113.1 1.1e-24
NP_001265048 (OMIM: 602240) zinc finger protein wi ( 578) 561 113.0 1.3e-24
XP_011513172 (OMIM: 602240) PREDICTED: zinc finger ( 578) 561 113.0 1.3e-24
XP_016866755 (OMIM: 602240) PREDICTED: zinc finger ( 578) 561 113.0 1.3e-24
NP_006289 (OMIM: 602240) zinc finger protein with ( 578) 561 113.0 1.3e-24
XP_011522308 (OMIM: 616463) PREDICTED: zinc finger ( 396) 558 112.3 1.5e-24
NP_001307881 (OMIM: 616463) zinc finger protein 23 ( 435) 558 112.3 1.6e-24
>>NP_115723 (OMIM: 609601) zinc finger protein 397 isofo (275 aa)
initn: 1874 init1: 1874 opt: 1874 Z-score: 1872.4 bits: 354.2 E(85289): 1.5e-97
Smith-Waterman score: 1874; 100.0% identity (100.0% similar) in 275 aa overlap (1-275:1-275)
10 20 30 40 50 60
pF1KE5 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 AVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQESTDIHLQPLKTQLKSWKPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 AVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQESTDIHLQPLKTQLKSWKPC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 LSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPPKASSAIRWECVSPGSFPGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 LSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPPKASSAIRWECVSPGSFPGD
190 200 210 220 230 240
250 260 270
pF1KE5 IIAAEATHSTISCFAINTLPATILPSKNVNRKYFS
:::::::::::::::::::::::::::::::::::
NP_115 IIAAEATHSTISCFAINTLPATILPSKNVNRKYFS
250 260 270
>>XP_016881531 (OMIM: 609601) PREDICTED: zinc finger pro (534 aa)
initn: 1515 init1: 1474 opt: 1475 Z-score: 1471.7 bits: 281.1 E(85289): 3.1e-75
Smith-Waterman score: 1475; 91.8% identity (93.4% similar) in 243 aa overlap (1-237:1-243)
10 20 30 40 50 60
pF1KE5 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 AVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQESTDIHLQPLKTQLKSWKPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQESTDIHLQPLKTQLKSWKPC
130 140 150 160 170 180
190 200 210 220 230
pF1KE5 LSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPP---KASSAIRWECVSP---
:::::::::::::::::::::::::::::::::::. . : .:: . ::
XP_016 LSPKSDCENSETATKEGISEEKSQGLPQEPSFRGISEHESNLVWKQGSATGEKLRSPSQG
190 200 210 220 230 240
240 250 260 270
pF1KE5 GSFPGDIIAAEATHSTISCFAINTLPATILPSKNVNRKYFS
:::
XP_016 GSFSQVIFTNKSLGKRDLYDEAERCLILTTDSIMCQKVPPEERPYRCDVCGHSFKQHSSL
250 260 270 280 290 300
>>XP_011524533 (OMIM: 609601) PREDICTED: zinc finger pro (534 aa)
initn: 1515 init1: 1474 opt: 1475 Z-score: 1471.7 bits: 281.1 E(85289): 3.1e-75
Smith-Waterman score: 1475; 91.8% identity (93.4% similar) in 243 aa overlap (1-237:1-243)
10 20 30 40 50 60
pF1KE5 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 AVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQESTDIHLQPLKTQLKSWKPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQESTDIHLQPLKTQLKSWKPC
130 140 150 160 170 180
190 200 210 220 230
pF1KE5 LSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPP---KASSAIRWECVSP---
:::::::::::::::::::::::::::::::::::. . : .:: . ::
XP_011 LSPKSDCENSETATKEGISEEKSQGLPQEPSFRGISEHESNLVWKQGSATGEKLRSPSQG
190 200 210 220 230 240
240 250 260 270
pF1KE5 GSFPGDIIAAEATHSTISCFAINTLPATILPSKNVNRKYFS
:::
XP_011 GSFSQVIFTNKSLGKRDLYDEAERCLILTTDSIMCQKVPPEERPYRCDVCGHSFKQHSSL
250 260 270 280 290 300
>>NP_001128650 (OMIM: 609601) zinc finger protein 397 is (534 aa)
initn: 1515 init1: 1474 opt: 1475 Z-score: 1471.7 bits: 281.1 E(85289): 3.1e-75
Smith-Waterman score: 1475; 91.8% identity (93.4% similar) in 243 aa overlap (1-237:1-243)
10 20 30 40 50 60
pF1KE5 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 AVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQESTDIHLQPLKTQLKSWKPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQESTDIHLQPLKTQLKSWKPC
130 140 150 160 170 180
190 200 210 220 230
pF1KE5 LSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPP---KASSAIRWECVSP---
:::::::::::::::::::::::::::::::::::. . : .:: . ::
NP_001 LSPKSDCENSETATKEGISEEKSQGLPQEPSFRGISEHESNLVWKQGSATGEKLRSPSQG
190 200 210 220 230 240
240 250 260 270
pF1KE5 GSFPGDIIAAEATHSTISCFAINTLPATILPSKNVNRKYFS
:::
NP_001 GSFSQVIFTNKSLGKRDLYDEAERCLILTTDSIMCQKVPPEERPYRCDVCGHSFKQHSSL
250 260 270 280 290 300
>>XP_011524532 (OMIM: 609601) PREDICTED: zinc finger pro (553 aa)
initn: 985 init1: 944 opt: 944 Z-score: 943.6 bits: 183.4 E(85289): 8.1e-46
Smith-Waterman score: 1427; 85.1% identity (86.6% similar) in 262 aa overlap (1-237:1-262)
10 20 30 40 50 60
pF1KE5 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
70 80 90 100 110 120
130 140 150 160
pF1KE5 AVTLLEDLEREFDDPGQQV-------------------PASPQGPAVPWKDLTCLRASQE
::::::::::::::::::: ::::::::::::::::::::::
XP_011 AVTLLEDLEREFDDPGQQVGTEKSDVGKGIYSLEHVMVPASPQGPAVPWKDLTCLRASQE
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE5 STDIHLQPLKTQLKSWKPCLSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::. .
XP_011 STDIHLQPLKTQLKSWKPCLSPKSDCENSETATKEGISEEKSQGLPQEPSFRGISEHESN
190 200 210 220 230 240
230 240 250 260 270
pF1KE5 ---KASSAIRWECVSP---GSFPGDIIAAEATHSTISCFAINTLPATILPSKNVNRKYFS
: .:: . :: :::
XP_011 LVWKQGSATGEKLRSPSQGGSFSQVIFTNKSLGKRDLYDEAERCLILTTDSIMCQKVPPE
250 260 270 280 290 300
>>XP_011524531 (OMIM: 609601) PREDICTED: zinc finger pro (553 aa)
initn: 985 init1: 944 opt: 944 Z-score: 943.6 bits: 183.4 E(85289): 8.1e-46
Smith-Waterman score: 1427; 85.1% identity (86.6% similar) in 262 aa overlap (1-237:1-262)
10 20 30 40 50 60
pF1KE5 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
70 80 90 100 110 120
130 140 150 160
pF1KE5 AVTLLEDLEREFDDPGQQV-------------------PASPQGPAVPWKDLTCLRASQE
::::::::::::::::::: ::::::::::::::::::::::
XP_011 AVTLLEDLEREFDDPGQQVGTEKSDVGKGIYSLEHVMVPASPQGPAVPWKDLTCLRASQE
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE5 STDIHLQPLKTQLKSWKPCLSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::. .
XP_011 STDIHLQPLKTQLKSWKPCLSPKSDCENSETATKEGISEEKSQGLPQEPSFRGISEHESN
190 200 210 220 230 240
230 240 250 260 270
pF1KE5 ---KASSAIRWECVSP---GSFPGDIIAAEATHSTISCFAINTLPATILPSKNVNRKYFS
: .:: . :: :::
XP_011 LVWKQGSATGEKLRSPSQGGSFSQVIFTNKSLGKRDLYDEAERCLILTTDSIMCQKVPPE
250 260 270 280 290 300
>>XP_006722621 (OMIM: 609601) PREDICTED: zinc finger pro (553 aa)
initn: 985 init1: 944 opt: 944 Z-score: 943.6 bits: 183.4 E(85289): 8.1e-46
Smith-Waterman score: 1427; 85.1% identity (86.6% similar) in 262 aa overlap (1-237:1-262)
10 20 30 40 50 60
pF1KE5 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
70 80 90 100 110 120
130 140 150 160
pF1KE5 AVTLLEDLEREFDDPGQQV-------------------PASPQGPAVPWKDLTCLRASQE
::::::::::::::::::: ::::::::::::::::::::::
XP_006 AVTLLEDLEREFDDPGQQVGTEKSDVGKGIYSLEHVMVPASPQGPAVPWKDLTCLRASQE
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE5 STDIHLQPLKTQLKSWKPCLSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::. .
XP_006 STDIHLQPLKTQLKSWKPCLSPKSDCENSETATKEGISEEKSQGLPQEPSFRGISEHESN
190 200 210 220 230 240
230 240 250 260 270
pF1KE5 ---KASSAIRWECVSP---GSFPGDIIAAEATHSTISCFAINTLPATILPSKNVNRKYFS
: .:: . :: :::
XP_006 LVWKQGSATGEKLRSPSQGGSFSQVIFTNKSLGKRDLYDEAERCLILTTDSIMCQKVPPE
250 260 270 280 290 300
>>XP_011513109 (OMIM: 610794) PREDICTED: zinc finger and (406 aa)
initn: 661 init1: 579 opt: 676 Z-score: 679.0 bits: 134.0 E(85289): 4.4e-31
Smith-Waterman score: 676; 50.2% identity (74.9% similar) in 215 aa overlap (18-231:7-220)
10 20 30 40 50 60
pF1KE5 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
. .: .::::.. ::.. . :.. : :: :: ::.:::::
XP_011 MASTEEQYDLKIVKVEEDPIWDQETHLRGNNFSGQEASRQLFRQFCYQE
10 20 30 40
70 80 90 100 110 120
pF1KE5 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
:::::::::::.:::.::: ::.::::::::::::::::.::::::: ::..:.::::::
XP_011 TPGPREALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPESGEE
50 60 70 80 90 100
130 140 150 160 170
pF1KE5 AVTLLEDLEREFDDPGQQVPASPQGPA-VPWKDLTCLRASQESTDIHLQPLKTQLKSWKP
::...::::.:...::.:.: .: . : .:. :...:: :::.:::. :::. .
XP_011 AVAVVEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQEPTDIQLQPMVTQLRYESF
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE5 CLSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPPKASSAIRWECVSPGSFPG
:: .. ...:. .. :.. : . . ::.: . .: : :
XP_011 CLHQFQE-QDGESIPENQELASKQEILKEMEHLGDSKLQRDVSLDSKYRETCKRDSKAEK
170 180 190 200 210 220
240 250 260 270
pF1KE5 DIIAAEATHSTISCFAINTLPATILPSKNVNRKYFS
XP_011 QQAHSTGERRHRCNECGKSFTKSSVLIEHQRIHTGEKPYECEECGKAFSRRSSLNEHRRS
230 240 250 260 270 280
>>XP_005249353 (OMIM: 610794) PREDICTED: zinc finger and (406 aa)
initn: 661 init1: 579 opt: 676 Z-score: 679.0 bits: 134.0 E(85289): 4.4e-31
Smith-Waterman score: 676; 50.2% identity (74.9% similar) in 215 aa overlap (18-231:7-220)
10 20 30 40 50 60
pF1KE5 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
. .: .::::.. ::.. . :.. : :: :: ::.:::::
XP_005 MASTEEQYDLKIVKVEEDPIWDQETHLRGNNFSGQEASRQLFRQFCYQE
10 20 30 40
70 80 90 100 110 120
pF1KE5 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
:::::::::::.:::.::: ::.::::::::::::::::.::::::: ::..:.::::::
XP_005 TPGPREALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPESGEE
50 60 70 80 90 100
130 140 150 160 170
pF1KE5 AVTLLEDLEREFDDPGQQVPASPQGPA-VPWKDLTCLRASQESTDIHLQPLKTQLKSWKP
::...::::.:...::.:.: .: . : .:. :...:: :::.:::. :::. .
XP_005 AVAVVEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQEPTDIQLQPMVTQLRYESF
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE5 CLSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPPKASSAIRWECVSPGSFPG
:: .. ...:. .. :.. : . . ::.: . .: : :
XP_005 CLHQFQE-QDGESIPENQELASKQEILKEMEHLGDSKLQRDVSLDSKYRETCKRDSKAEK
170 180 190 200 210 220
240 250 260 270
pF1KE5 DIIAAEATHSTISCFAINTLPATILPSKNVNRKYFS
XP_005 QQAHSTGERRHRCNECGKSFTKSSVLIEHQRIHTGEKPYECEECGKAFSRRSSLNEHRRS
230 240 250 260 270 280
>>XP_005249352 (OMIM: 610794) PREDICTED: zinc finger and (406 aa)
initn: 661 init1: 579 opt: 676 Z-score: 679.0 bits: 134.0 E(85289): 4.4e-31
Smith-Waterman score: 676; 50.2% identity (74.9% similar) in 215 aa overlap (18-231:7-220)
10 20 30 40 50 60
pF1KE5 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
. .: .::::.. ::.. . :.. : :: :: ::.:::::
XP_005 MASTEEQYDLKIVKVEEDPIWDQETHLRGNNFSGQEASRQLFRQFCYQE
10 20 30 40
70 80 90 100 110 120
pF1KE5 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
:::::::::::.:::.::: ::.::::::::::::::::.::::::: ::..:.::::::
XP_005 TPGPREALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPESGEE
50 60 70 80 90 100
130 140 150 160 170
pF1KE5 AVTLLEDLEREFDDPGQQVPASPQGPA-VPWKDLTCLRASQESTDIHLQPLKTQLKSWKP
::...::::.:...::.:.: .: . : .:. :...:: :::.:::. :::. .
XP_005 AVAVVEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQEPTDIQLQPMVTQLRYESF
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE5 CLSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPPKASSAIRWECVSPGSFPG
:: .. ...:. .. :.. : . . ::.: . .: : :
XP_005 CLHQFQE-QDGESIPENQELASKQEILKEMEHLGDSKLQRDVSLDSKYRETCKRDSKAEK
170 180 190 200 210 220
240 250 260 270
pF1KE5 DIIAAEATHSTISCFAINTLPATILPSKNVNRKYFS
XP_005 QQAHSTGERRHRCNECGKSFTKSSVLIEHQRIHTGEKPYECEECGKAFSRRSSLNEHRRS
230 240 250 260 270 280
275 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 23:42:33 2016 done: Mon Nov 7 23:42:34 2016
Total Scan time: 6.580 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]