Result of FASTA (ccds) for
pFN21AE5309
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5309, 275 aa
1>>>pF1KE5309 275 - 275 aa - 275 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3258+/-0.000634; mu= 11.4283+/- 0.038
mean_var=95.4900+/-18.794, 0's: 0 Z-trim(114.0): 82 B-trim: 10 in 1/50
Lambda= 0.131249
statistics sampled from 14531 (14616) to 14531 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.796), E-opt: 0.2 (0.449), width: 16
Scan time: 2.170
The best scores are: opt bits E(32554)
CCDS32814.1 ZNF397 gene_id:84307|Hs108|chr18 ( 275) 1874 364.1 5.9e-101
CCDS45852.1 ZNF397 gene_id:84307|Hs108|chr18 ( 534) 1475 288.8 5.7e-78
CCDS4649.1 ZSCAN31 gene_id:64288|Hs108|chr6 ( 406) 676 137.4 1.6e-32
CCDS34355.1 ZBED9 gene_id:114821|Hs108|chr6 (1325) 650 132.8 1.3e-30
CCDS4644.1 ZSCAN16 gene_id:80345|Hs108|chr6 ( 348) 627 128.1 8.6e-30
CCDS47393.1 ZSCAN23 gene_id:222696|Hs108|chr6 ( 389) 592 121.5 9.4e-28
CCDS34698.1 ZKSCAN1 gene_id:7586|Hs108|chr7 ( 563) 589 121.0 1.9e-27
CCDS5681.1 ZSCAN21 gene_id:7589|Hs108|chr7 ( 473) 583 119.8 3.6e-27
CCDS11068.1 ZNF232 gene_id:7775|Hs108|chr17 ( 444) 572 117.7 1.4e-26
CCDS42427.1 ZSCAN30 gene_id:100101467|Hs108|chr18 ( 494) 566 116.6 3.5e-26
CCDS4646.1 ZSCAN9 gene_id:7746|Hs108|chr6 ( 394) 562 115.8 4.9e-26
CCDS4645.1 ZKSCAN8 gene_id:7745|Hs108|chr6 ( 578) 561 115.7 7.6e-26
CCDS82043.1 ZNF232 gene_id:7775|Hs108|chr17 ( 435) 558 115.1 8.9e-26
CCDS56407.1 ZSCAN9 gene_id:7746|Hs108|chr6 ( 445) 555 114.5 1.3e-25
CCDS4643.1 ZNF165 gene_id:7718|Hs108|chr6 ( 485) 552 114.0 2.1e-25
CCDS69349.1 ZKSCAN1 gene_id:7586|Hs108|chr7 ( 527) 542 112.1 8.5e-25
CCDS11912.1 ZNF24 gene_id:7572|Hs108|chr18 ( 368) 537 111.1 1.2e-24
CCDS11913.1 ZNF396 gene_id:252884|Hs108|chr18 ( 333) 535 110.7 1.5e-24
CCDS82247.1 ZNF396 gene_id:252884|Hs108|chr18 ( 335) 535 110.7 1.5e-24
CCDS77175.1 ZNF24 gene_id:7572|Hs108|chr18 ( 193) 529 109.4 2e-24
CCDS82246.1 ZNF396 gene_id:252884|Hs108|chr18 ( 210) 524 108.5 4.2e-24
CCDS78119.1 ZSCAN26 gene_id:7741|Hs108|chr6 ( 478) 490 102.2 7.2e-22
CCDS4647.1 ZKSCAN4 gene_id:387032|Hs108|chr6 ( 545) 489 102.1 9.2e-22
CCDS5667.1 ZKSCAN5 gene_id:23660|Hs108|chr7 ( 839) 487 101.8 1.7e-21
CCDS4648.1 PGBD1 gene_id:84547|Hs108|chr6 ( 809) 486 101.6 1.9e-21
CCDS10499.1 ZNF263 gene_id:10127|Hs108|chr16 ( 683) 483 101.0 2.4e-21
CCDS4650.1 ZKSCAN3 gene_id:80317|Hs108|chr6 ( 538) 471 98.7 9.7e-21
CCDS2714.1 ZKSCAN7 gene_id:55888|Hs108|chr3 ( 276) 466 97.5 1.1e-20
CCDS10095.2 ZSCAN29 gene_id:146050|Hs108|chr15 ( 852) 468 98.2 2.1e-20
CCDS2715.1 ZKSCAN7 gene_id:55888|Hs108|chr3 ( 754) 466 97.8 2.5e-20
CCDS2713.1 ZNF445 gene_id:353274|Hs108|chr3 (1031) 461 96.9 6.2e-20
CCDS66921.1 ZSCAN32 gene_id:54925|Hs108|chr16 ( 697) 453 95.3 1.3e-19
CCDS76814.1 ZNF500 gene_id:26048|Hs108|chr16 ( 441) 444 93.5 2.8e-19
CCDS32383.1 ZNF500 gene_id:26048|Hs108|chr16 ( 480) 444 93.5 3e-19
CCDS33743.1 ZNF197 gene_id:10168|Hs108|chr3 ( 267) 438 92.2 4.1e-19
CCDS41300.1 ZSCAN20 gene_id:7579|Hs108|chr1 (1043) 441 93.1 8.6e-19
CCDS5666.1 ZNF394 gene_id:84124|Hs108|chr7 ( 561) 435 91.8 1.1e-18
CCDS32380.1 ZNF174 gene_id:7727|Hs108|chr16 ( 234) 429 90.5 1.2e-18
CCDS2717.1 ZNF197 gene_id:10168|Hs108|chr3 (1029) 438 92.6 1.3e-18
CCDS10495.1 ZNF213 gene_id:7760|Hs108|chr16 ( 459) 432 91.2 1.4e-18
CCDS8443.1 ZNF202 gene_id:7753|Hs108|chr11 ( 648) 434 91.7 1.5e-18
CCDS10504.1 ZNF174 gene_id:7727|Hs108|chr16 ( 407) 431 91.0 1.5e-18
CCDS5671.2 ZSCAN25 gene_id:221785|Hs108|chr7 ( 544) 431 91.1 1.9e-18
CCDS32410.1 ZKSCAN2 gene_id:342357|Hs108|chr16 ( 967) 423 89.7 8.6e-18
CCDS35105.1 ZNF483 gene_id:158399|Hs108|chr9 ( 256) 407 86.4 2.3e-17
CCDS35106.1 ZNF483 gene_id:158399|Hs108|chr9 ( 744) 407 86.6 5.6e-17
CCDS14649.1 ZNF449 gene_id:203523|Hs108|chrX ( 518) 402 85.6 8e-17
CCDS12975.1 ZSCAN22 gene_id:342945|Hs108|chr19 ( 491) 386 82.5 6.3e-16
CCDS1631.1 ZNF496 gene_id:84838|Hs108|chr1 ( 587) 377 80.9 2.4e-15
CCDS12982.1 ZNF446 gene_id:55663|Hs108|chr19 ( 450) 375 80.4 2.5e-15
>>CCDS32814.1 ZNF397 gene_id:84307|Hs108|chr18 (275 aa)
initn: 1874 init1: 1874 opt: 1874 Z-score: 1925.9 bits: 364.1 E(32554): 5.9e-101
Smith-Waterman score: 1874; 100.0% identity (100.0% similar) in 275 aa overlap (1-275:1-275)
10 20 30 40 50 60
pF1KE5 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 AVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQESTDIHLQPLKTQLKSWKPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 AVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQESTDIHLQPLKTQLKSWKPC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 LSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPPKASSAIRWECVSPGSFPGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPPKASSAIRWECVSPGSFPGD
190 200 210 220 230 240
250 260 270
pF1KE5 IIAAEATHSTISCFAINTLPATILPSKNVNRKYFS
:::::::::::::::::::::::::::::::::::
CCDS32 IIAAEATHSTISCFAINTLPATILPSKNVNRKYFS
250 260 270
>>CCDS45852.1 ZNF397 gene_id:84307|Hs108|chr18 (534 aa)
initn: 1515 init1: 1474 opt: 1475 Z-score: 1513.3 bits: 288.8 E(32554): 5.7e-78
Smith-Waterman score: 1475; 91.8% identity (93.4% similar) in 243 aa overlap (1-237:1-243)
10 20 30 40 50 60
pF1KE5 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 AVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQESTDIHLQPLKTQLKSWKPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 AVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQESTDIHLQPLKTQLKSWKPC
130 140 150 160 170 180
190 200 210 220 230
pF1KE5 LSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPP---KASSAIRWECVSP---
:::::::::::::::::::::::::::::::::::. . : .:: . ::
CCDS45 LSPKSDCENSETATKEGISEEKSQGLPQEPSFRGISEHESNLVWKQGSATGEKLRSPSQG
190 200 210 220 230 240
240 250 260 270
pF1KE5 GSFPGDIIAAEATHSTISCFAINTLPATILPSKNVNRKYFS
:::
CCDS45 GSFSQVIFTNKSLGKRDLYDEAERCLILTTDSIMCQKVPPEERPYRCDVCGHSFKQHSSL
250 260 270 280 290 300
>>CCDS4649.1 ZSCAN31 gene_id:64288|Hs108|chr6 (406 aa)
initn: 661 init1: 579 opt: 676 Z-score: 697.4 bits: 137.4 E(32554): 1.6e-32
Smith-Waterman score: 676; 50.2% identity (74.9% similar) in 215 aa overlap (18-231:7-220)
10 20 30 40 50 60
pF1KE5 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCYQE
. .: .::::.. ::.. . :.. : :: :: ::.:::::
CCDS46 MASTEEQYDLKIVKVEEDPIWDQETHLRGNNFSGQEASRQLFRQFCYQE
10 20 30 40
70 80 90 100 110 120
pF1KE5 TPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESGEE
:::::::::::.:::.::: ::.::::::::::::::::.::::::: ::..:.::::::
CCDS46 TPGPREALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPESGEE
50 60 70 80 90 100
130 140 150 160 170
pF1KE5 AVTLLEDLEREFDDPGQQVPASPQGPA-VPWKDLTCLRASQESTDIHLQPLKTQLKSWKP
::...::::.:...::.:.: .: . : .:. :...:: :::.:::. :::. .
CCDS46 AVAVVEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQEPTDIQLQPMVTQLRYESF
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE5 CLSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPPKASSAIRWECVSPGSFPG
:: .. ...:. .. :.. : . . ::.: . .: : :
CCDS46 CLHQFQE-QDGESIPENQELASKQEILKEMEHLGDSKLQRDVSLDSKYRETCKRDSKAEK
170 180 190 200 210 220
240 250 260 270
pF1KE5 DIIAAEATHSTISCFAINTLPATILPSKNVNRKYFS
CCDS46 QQAHSTGERRHRCNECGKSFTKSSVLIEHQRIHTGEKPYECEECGKAFSRRSSLNEHRRS
230 240 250 260 270 280
>>CCDS34355.1 ZBED9 gene_id:114821|Hs108|chr6 (1325 aa)
initn: 647 init1: 592 opt: 650 Z-score: 663.2 bits: 132.8 E(32554): 1.3e-30
Smith-Waterman score: 650; 54.8% identity (75.0% similar) in 188 aa overlap (1-186:1-188)
10 20 30 40 50
pF1KE5 MAVESGVISTLIPQDPPEQ-ELILVKV-EDNFSWDEKFKQNGSTQSCQELFRQQFRKFCY
: . : :. .: : : :: :.: ::: :.. .::.. . . .:: ::.::.:::
CCDS34 MEAVSRVFPALAGQAPEEQGEIIKVKVKEEDHTWDQESALRRNLSYTRELSRQRFRQFCY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 QETPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESG
:::::::::::.:.::: ::: ::.::::::::::::::::.::::::: ::..::::::
CCDS34 QETPGPREALSQLRELCRQWLNPEIHTKEQILELLVLEQFLTILPEELQSWVREHNPESG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE5 EEAVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQESTDIHLQPLKTQLKSWK
::.::::::::::.:.: ::: . : : ... : ...:: .:: .. ... .
CCDS34 EEVVTLLEDLERELDEPRQQVSQGTYGQEVSMEEMIPLDSAKESLGTQLQSMEDRMECES
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE5 PCLSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPPKASSAIRWECVSPGSFP
: : .:
CCDS34 PEPHPLQDNGSFLWFSMMSQSMGGDNLSSLDTNEAEIEPENMREKFFRSLARLLENKSNN
190 200 210 220 230 240
>>CCDS4644.1 ZSCAN16 gene_id:80345|Hs108|chr6 (348 aa)
initn: 601 init1: 555 opt: 627 Z-score: 648.3 bits: 128.1 E(32554): 8.6e-30
Smith-Waterman score: 627; 47.6% identity (75.2% similar) in 210 aa overlap (9-214:3-200)
10 20 30 40 50
pF1KE5 MAVESGVISTLIPQDPPEQELILVKVEDNFSWDEKFKQNGSTQSC----QELFRQQFRKF
..: :.: .. :...:.::.. : :..:.:.: .::.::.:::.
CCDS46 MTTALEPED--QKGLLIIKAEDHY-WG----QDSSSQKCSPHRRELYRQHFRKL
10 20 30 40
60 70 80 90 100 110
pF1KE5 CYQETPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPE
:::..:::::::..: ::: ::: :: :::::::.::::::::::::..:: ::. :.::
CCDS46 CYQDAPGPREALTQLWELCRQWLRPECHTKEQILDLLVLEQFLSILPKDLQAWVRAHHPE
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE5 SGEEAVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQESTDIHLQPLKTQLKS
.::::::.:::::::.:.::.:::.. . . :. : :: ..:.: ::::.
CCDS46 TGEEAVTVLEDLERELDEPGKQVPGNSERRDILMDKLAPLGRPYESLTVQLHPKKTQLE-
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE5 WKPCLSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPPKASSAIRWECVSPGS
. .:. . ....: ..: ...: .:.. : :
CCDS46 -QEAGKPQRNGDKTRTKNEELFQKE---DMPKDKEFLGEINDRLNKDTPQHPKSKDIIEN
170 180 190 200 210 220
240 250 260 270
pF1KE5 FPGDIIAAEATHSTISCFAINTLPATILPSKNVNRKYFS
CCDS46 EGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH
230 240 250 260 270 280
>>CCDS47393.1 ZSCAN23 gene_id:222696|Hs108|chr6 (389 aa)
initn: 572 init1: 572 opt: 592 Z-score: 611.8 bits: 121.5 E(32554): 9.4e-28
Smith-Waterman score: 592; 51.5% identity (71.3% similar) in 202 aa overlap (10-201:4-205)
10 20 30 40 50
pF1KE5 MAVESGVISTLIPQDPPEQE-LILVKVEDNFSWDEKFKQNGSTQS---CQELFRQQFRKF
:: : :: :. :::... ..: ... .:.::..::.:
CCDS47 MAITLTLQTAEMQEGLLAVKVKEEEEEHSCGPESGLSRNNPHTREIFRRRFRQF
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 CYQETPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPE
::::.:::::::.::::::.::: ::.::::::::::::::::.::::::: ::.:: :
CCDS47 CYQESPGPREALQRLQELCHQWLRPEMHTKEQILELLVLEQFLTILPEELQAWVRQHRPV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 SGEEAVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQESTDIHLQPLKTQL--
:::::::.:::::::.::::.:: . . :. . :.:::.. ..: :. ::
CCDS47 SGEEAVTVLEDLERELDDPGEQVLSHAHEQEEFVKEKATPGAAQESSNDQFQTLEEQLGY
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 KSWKPC----LSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPPKASSAIRWE
. . : .. :. : : : :. ::.:
CCDS47 NLREVCPVQEIDGKAGTWNVELAPKREISQEVKSLIQVLGKQNGNITQIPEYGDTCDREG
180 190 200 210 220 230
240 250 260 270
pF1KE5 CVSPGSFPGDIIAAEATHSTISCFAINTLPATILPSKNVNRKYFS
CCDS47 RLEKQRVSSSVERPYICSECGKSFTQNSILIEHQRTHTGEKPYECDECGRAFSQRSGLFQ
240 250 260 270 280 290
>>CCDS34698.1 ZKSCAN1 gene_id:7586|Hs108|chr7 (563 aa)
initn: 527 init1: 463 opt: 589 Z-score: 606.3 bits: 121.0 E(32554): 1.9e-27
Smith-Waterman score: 589; 52.1% identity (75.8% similar) in 190 aa overlap (1-181:2-189)
10 20 30 40 50
pF1KE5 MAVESGVISTLIPQDPPEQE-LILVKVEDNFSWDEKFKQNGSTQSCQ----ELFRQQFR
:..:: . : :: :.. ...::::.. :. . :... :. :.:::.::
CCDS34 MMTAESREATGLSPQAAQEKDGIVIVKVEEEDEEDHMWGQDSTLQDTPPPDPEIFRQRFR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 KFCYQETPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHN
.::::.: :::::::::.:::.::: ::..:::::::::::::::::::.:::.:.:..
CCDS34 RFCYQNTFGPREALSRLKELCHQWLRPEINTKEQILELLVLEQFLSILPKELQVWLQEYR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE5 PESGEEAVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQEST--DIHLQPLKT
:.::::::::::::: .: :::::.. .:: . . .. : :::. :.: . ..
CCDS34 PDSGEEAVTLLEDLE--LDLSGQQVPGQVHGPEMLARGMVPLDPVQESSSFDLHHEATQS
130 140 150 160 170
180 190 200 210 220 230
pF1KE5 QLK--SWKPCLSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPPKASSAIRWE
..: : :: :
CCDS34 HFKHSSRKPRLLQSRALPAAHIPAPPHEGSPRDQAMASALFTADSQAMVKIEDMAVSLIL
180 190 200 210 220 230
>>CCDS5681.1 ZSCAN21 gene_id:7589|Hs108|chr7 (473 aa)
initn: 518 init1: 518 opt: 583 Z-score: 601.3 bits: 119.8 E(32554): 3.6e-27
Smith-Waterman score: 588; 44.5% identity (69.2% similar) in 247 aa overlap (6-233:7-243)
10 20 30 40 50
pF1KE5 MAVESGVISTLIPQDPPEQEL-ILVKVEDNFSWDEKFKQNGSTQSCQELFRQQFRKFCY
:. .: :. : :: ..::::.. .:: :. :.:::.::.: :
CCDS56 MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEK---EEK----GKYLPSLEMFRQRFRQFGY
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 QETPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESG
..:::::::::.:. :: .:: ::.::::::::::::::::.:::.::: :::.: :::.
CCDS56 HDTPGPREALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 EEAVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQES-TDIHLQPLKTQLK--
:::::::::::::.:.::.:: . :. :. .. ...:: .... :::.:. :
CCDS56 EEAVTLLEDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYE
120 130 140 150 160 170
180 190 200 210 220
pF1KE5 SWKPCL------------SPKS--DCENSETATKEGISEEK-SQGLPQEPSFRGIKLSRP
:: : .:.. ::. : : .:. .:.: :.. . .. .. ..
CCDS56 SWGPLYIQESGEEQEFAQDPRKVRDCRLS-TQHEESADEQKGSEAEGLKGDIISVIIANK
180 190 200 210 220 230
230 240 250 260 270
pF1KE5 PKASSAIRWECVSPGSFPGDIIAAEATHSTISCFAINTLPATILPSKNVNRKYFS
:.:: .. .::.
CCDS56 PEAS--LERQCVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSS
240 250 260 270 280 290
>>CCDS11068.1 ZNF232 gene_id:7775|Hs108|chr17 (444 aa)
initn: 516 init1: 445 opt: 572 Z-score: 590.4 bits: 117.7 E(32554): 1.4e-26
Smith-Waterman score: 572; 49.1% identity (69.3% similar) in 218 aa overlap (1-210:28-236)
10 20 30
pF1KE5 MAVESGVISTLIPQDPPEQE--LILVKVEDNFS
::: . :: : :: ... :.. :
CCDS11 MEPPGPVRGPLQDSSWYEPSAELVQTRMAVSLTAAETLALQGTQGQEKMMMMGPKEEEQS
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE5 WDEKFKQNGSTQSCQELFRQQFRKFCYQETPGPREALSRLQELCYQWLMPELHTKEQILE
. . . :. .. ::.:::.::.. ::::::::::::.:. :: .:: :: ::::::::
CCDS11 CEYETRLPGNHSTSQEIFRQRFRHLRYQETPGPREALSQLRVLCCEWLRPEKHTKEQILE
70 80 90 100 110 120
100 110 120 130 140
pF1KE5 LLVLEQFLSILPEELQIWVQQHNPESGEEAVTLLEDLEREFDDPGQQVPASPQGPAV--P
.:::::::.::::::: ::. :.:.:::::::.:::::. .. : :::. .::: :
CCDS11 FLVLEQFLTILPEELQSWVRGHHPKSGEEAVTVLEDLEKGLE-PEPQVPGPAHGPAQEEP
130 140 150 160 170
150 160 170 180 190 200
pF1KE5 WKDLTCLRASQESTDIHLQPLKTQLKSWKPCLSPKSD---CENSETATKEGISEEKSQG-
:. : :.::. .:.::: .:: : :::. . ..:..: : :..:
CCDS11 WEKKESLGAAQEALSIQLQPKETQ-----PF--PKSEQVYLHFLSVVTEDG-PEPKDKGS
180 190 200 210 220 230
210 220 230 240 250 260
pF1KE5 LPQEPSFRGIKLSRPPKASSAIRWECVSPGSFPGDIIAAEATHSTISCFAINTLPATILP
::: :
CCDS11 LPQPPITEVESQVFSEKLATDTSTFEATSEGTLELQQRNPKAERLRWSPAQEESFRQMVV
240 250 260 270 280 290
>>CCDS42427.1 ZSCAN30 gene_id:100101467|Hs108|chr18 (494 aa)
initn: 533 init1: 470 opt: 566 Z-score: 583.6 bits: 116.6 E(32554): 3.5e-26
Smith-Waterman score: 566; 52.0% identity (76.6% similar) in 175 aa overlap (5-176:2-173)
10 20 30 40 50
pF1KE5 MAVESGVISTLIPQDPPEQE-LILVKVED-NFSWDEKFKQNGSTQSCQELFRQQFRKFCY
:: ..: . : ::: :..::::. :. :. : . . : ::.:::.::.: :
CCDS42 MSGEATVLAYHAPEEQEGLLVVKVEEENYVLDQDFGLQENPWS-QEVFRQKFRQFSY
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 QETPGPREALSRLQELCYQWLMPELHTKEQILELLVLEQFLSILPEELQIWVQQHNPESG
... :::::::::.::: ::: ::.:.::::::::.:::::.::::::: :...: ::.:
CCDS42 SDSTGPREALSRLRELCCQWLRPEVHSKEQILELLMLEQFLAILPEELQAWLREHRPENG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 EEAVTLLEDLEREFDDPGQQVPASPQGPAVPWKDLTCLRASQE-STDIHLQPLKTQLKSW
:::::.::.::.:...: :: . .: . :...: : . : . .:::..: :.
CCDS42 EEAVTMLEELEKELEEPRQQ--DTTHGQEMFWQEMTSTGALKSLSLNSPVQPLENQCKTE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 KPCLSPKSDCENSETATKEGISEEKSQGLPQEPSFRGIKLSRPPKASSAIRWECVSPGSF
CCDS42 TQESQAFQERDGRMVAGKVLMAKQEIVECVASAAMISPGKLPGETHSQRIAEEALGGLDN
180 190 200 210 220 230
275 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 23:42:32 2016 done: Mon Nov 7 23:42:32 2016
Total Scan time: 2.170 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]