Result of FASTA (omim) for
pFN21AE5290
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5290, 252 aa
1>>>pF1KE5290 252 - 252 aa - 252 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3653+/-0.0003; mu= 14.5882+/- 0.019
mean_var=76.5771+/-15.657, 0's: 0 Z-trim(117.5): 73 B-trim: 0 in 0/55
Lambda= 0.146563
statistics sampled from 29469 (29544) to 29469 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.711), E-opt: 0.2 (0.346), width: 16
Scan time: 7.090
The best scores are: opt bits E(85289)
NP_203134 (OMIM: 603940) potassium channel subfami ( 252) 1675 363.1 2.6e-100
NP_258416 (OMIM: 603940) potassium channel subfami ( 252) 1675 363.1 2.6e-100
NP_005705 (OMIM: 603940) potassium channel subfami ( 257) 1597 346.6 2.5e-95
NP_203133 (OMIM: 603940) potassium channel subfami ( 307) 1590 345.2 7.9e-95
NP_002236 (OMIM: 601745) potassium channel subfami ( 336) 583 132.3 1.1e-30
NP_004814 (OMIM: 603939) potassium channel subfami ( 313) 441 102.3 1.1e-21
XP_011507825 (OMIM: 603219) PREDICTED: potassium c ( 370) 389 91.3 2.6e-18
XP_011507824 (OMIM: 603219) PREDICTED: potassium c ( 370) 389 91.3 2.6e-18
XP_011507826 (OMIM: 603219) PREDICTED: potassium c ( 370) 389 91.3 2.6e-18
NP_055032 (OMIM: 603219) potassium channel subfami ( 411) 389 91.4 2.8e-18
XP_016856738 (OMIM: 603219) PREDICTED: potassium c ( 412) 389 91.4 2.8e-18
NP_001017424 (OMIM: 603219) potassium channel subf ( 422) 389 91.4 2.8e-18
XP_016856737 (OMIM: 603219) PREDICTED: potassium c ( 422) 389 91.4 2.8e-18
NP_001017425 (OMIM: 603219) potassium channel subf ( 426) 389 91.4 2.9e-18
NP_066984 (OMIM: 605873) potassium channel subfami ( 538) 388 91.2 4e-18
NP_612191 (OMIM: 605873) potassium channel subfami ( 543) 388 91.2 4e-18
NP_612190 (OMIM: 605873) potassium channel subfami ( 543) 388 91.2 4e-18
NP_001128578 (OMIM: 607369) potassium channel subf ( 294) 375 88.3 1.7e-17
NP_115491 (OMIM: 607369) potassium channel subfami ( 309) 375 88.3 1.7e-17
NP_001128577 (OMIM: 607369) potassium channel subf ( 322) 364 86.0 8.9e-17
XP_016866835 (OMIM: 607369) PREDICTED: potassium c ( 262) 362 85.5 1e-16
NP_001128579 (OMIM: 607369) potassium channel subf ( 262) 362 85.5 1e-16
XP_011542486 (OMIM: 601745) PREDICTED: potassium c ( 268) 340 80.9 2.6e-15
NP_113648 (OMIM: 607370) potassium channel subfami ( 332) 318 76.3 7.8e-14
NP_001128583 (OMIM: 607370) potassium channel subf ( 271) 306 73.7 3.8e-13
NP_001304019 (OMIM: 605720) potassium channel subf ( 393) 305 73.6 6e-13
NP_201567 (OMIM: 605720) potassium channel subfami ( 393) 305 73.6 6e-13
XP_011513237 (OMIM: 607369) PREDICTED: potassium c ( 197) 294 71.0 1.7e-12
XP_011535142 (OMIM: 605873) PREDICTED: potassium c ( 410) 294 71.3 3.1e-12
XP_005249513 (OMIM: 603493) PREDICTED: potassium c ( 496) 294 71.3 3.6e-12
NP_003731 (OMIM: 603493) potassium channel subfami ( 499) 292 70.9 4.8e-12
NP_071753 (OMIM: 607368) potassium channel subfami ( 330) 252 62.3 1.2e-09
NP_002237 (OMIM: 603220,615344) potassium channel ( 394) 240 59.8 8.2e-09
XP_011515404 (OMIM: 605874,612292) PREDICTED: pota ( 374) 219 55.4 1.7e-07
NP_001269463 (OMIM: 605874,612292) potassium chann ( 374) 219 55.4 1.7e-07
XP_011515403 (OMIM: 605874,612292) PREDICTED: pota ( 401) 219 55.4 1.8e-07
XP_011525828 (OMIM: 603939) PREDICTED: potassium c ( 179) 203 51.8 1e-06
NP_071338 (OMIM: 607366) potassium channel subfami ( 430) 205 52.5 1.5e-06
XP_011525829 (OMIM: 603939) PREDICTED: potassium c ( 176) 167 44.2 0.00019
XP_016882995 (OMIM: 603939) PREDICTED: potassium c ( 185) 167 44.2 0.0002
NP_862823 (OMIM: 613655,613656) potassium channel ( 384) 162 43.3 0.00074
NP_071337 (OMIM: 607367) potassium channel subfami ( 408) 154 41.7 0.0025
XP_016857053 (OMIM: 176200,600923) PREDICTED: prot ( 362) 146 39.9 0.0074
XP_011507983 (OMIM: 176200,600923) PREDICTED: prot ( 362) 146 39.9 0.0074
XP_016857052 (OMIM: 176200,600923) PREDICTED: prot ( 362) 146 39.9 0.0074
XP_006711469 (OMIM: 176200,600923) PREDICTED: prot ( 388) 146 40.0 0.0078
XP_005245352 (OMIM: 176200,600923) PREDICTED: prot ( 388) 146 40.0 0.0078
XP_011507981 (OMIM: 176200,600923) PREDICTED: prot ( 388) 146 40.0 0.0078
XP_011507980 (OMIM: 176200,600923) PREDICTED: prot ( 388) 146 40.0 0.0078
XP_016857051 (OMIM: 176200,600923) PREDICTED: prot ( 388) 146 40.0 0.0078
>>NP_203134 (OMIM: 603940) potassium channel subfamily K (252 aa)
initn: 1675 init1: 1675 opt: 1675 Z-score: 1921.8 bits: 363.1 E(85289): 2.6e-100
Smith-Waterman score: 1675; 100.0% identity (100.0% similar) in 252 aa overlap (1-252:1-252)
10 20 30 40 50 60
pF1KE5 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_203 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_203 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_203 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_203 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG
190 200 210 220 230 240
250
pF1KE5 GGTSLQGTAWEG
::::::::::::
NP_203 GGTSLQGTAWEG
250
>>NP_258416 (OMIM: 603940) potassium channel subfamily K (252 aa)
initn: 1675 init1: 1675 opt: 1675 Z-score: 1921.8 bits: 363.1 E(85289): 2.6e-100
Smith-Waterman score: 1675; 100.0% identity (100.0% similar) in 252 aa overlap (1-252:1-252)
10 20 30 40 50 60
pF1KE5 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_258 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_258 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_258 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_258 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG
190 200 210 220 230 240
250
pF1KE5 GGTSLQGTAWEG
::::::::::::
NP_258 GGTSLQGTAWEG
250
>>NP_005705 (OMIM: 603940) potassium channel subfamily K (257 aa)
initn: 1646 init1: 1594 opt: 1597 Z-score: 1832.5 bits: 346.6 E(85289): 2.5e-95
Smith-Waterman score: 1597; 96.0% identity (98.0% similar) in 252 aa overlap (1-252:1-252)
10 20 30 40 50 60
pF1KE5 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG
190 200 210 220 230 240
250
pF1KE5 GGTSLQGTAWEG
.. : . . .:
NP_005 KSSHLTACGGRGKRSLD
250
>>NP_203133 (OMIM: 603940) potassium channel subfamily K (307 aa)
initn: 1590 init1: 1590 opt: 1590 Z-score: 1823.5 bits: 345.2 E(85289): 7.9e-95
Smith-Waterman score: 1590; 100.0% identity (100.0% similar) in 240 aa overlap (1-240:1-240)
10 20 30 40 50 60
pF1KE5 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_203 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_203 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_203 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_203 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG
190 200 210 220 230 240
250
pF1KE5 GGTSLQGTAWEG
NP_203 YLLLGLLAMLLAVETFSELPQVRAMGKFFRPSGPVTAEDQGGILGQDELALSTLPPAAPA
250 260 270 280 290 300
>>NP_002236 (OMIM: 601745) potassium channel subfamily K (336 aa)
initn: 498 init1: 292 opt: 583 Z-score: 672.2 bits: 132.3 E(85289): 1.1e-30
Smith-Waterman score: 583; 44.0% identity (72.9% similar) in 218 aa overlap (7-223:21-236)
10 20 30 40
pF1KE5 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAE
: .:.::...:: : .:::::...: : :. :::
NP_002 MLQSLAGSSCVRLVERHRSAWC-FGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKL
10 20 30 40 50
50 60 70 80 90 100
pF1KE5 LAAFQAEHRACLPPGALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTT
: ::. :: ::..:: .: .. .:::.:.:.: . .::. :::.::...:.::
NP_002 KRRFLEEHE-CLSEQQLEQFLGRVLEASNYGVSVLSNASGNWNWDFTSALFFASTVLSTT
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE5 GYGHMAPLSPGGKAFCMVYAALGLPASLA-LVATLRHCLLPVLSRPRAWVAVHWQLSPAR
:::: .::: ::::::..:...:.: .: :.:.... . : :: . ..: .:
NP_002 GYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTRRPVLYFHIRWGFSKQV
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE5 AALLQAVALGLLVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRS
.:...:: ::....: : ..:: :. :. : ..: . :::: ::::::: : .::.:
NP_002 VAIVHAVLLGFVTVSCFFFIPAAVFSVLEDDWNFLESFYFCFISLSTIGLGDYVPGEGYN
180 190 200 210 220 230
230 240 250
pF1KE5 LHPVIYHLGQLALLGGGTSLQGTAWEG
NP_002 QKFRELYKIGITCYLLLGLIAMLVVLETFCELHELKKFRKMFYVKKDKDEDQVHIIEHDQ
240 250 260 270 280 290
>>NP_004814 (OMIM: 603939) potassium channel subfamily K (313 aa)
initn: 457 init1: 195 opt: 441 Z-score: 510.3 bits: 102.3 E(85289): 1.1e-21
Smith-Waterman score: 447; 38.2% identity (65.3% similar) in 251 aa overlap (9-239:2-250)
10 20 30 40 50
pF1KE5 MGGLRPWSRYGLLVVAHLLA----LGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRA
: : :... : : : :::.. :::: ::.:::.. : : ..
NP_004 MRRGALLAGALAAYAAYLVLGALLVARLEGPHEARLRAELET-LRAQLLQRSP
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 CLPPGALEELLGTALATQAHGVSTLGNSSEGRT-----WDLPSALLFAASILTTTGYGHM
:. ::. .. .::. : .:.:.: . . ::. :::.::....::.:::.
NP_004 CVAAPALDAFVERVLAAGRLGRVVLANASGSANASDPAWDFASALFFASTLITTVGYGYT
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 APLSPGGKAFCMVYAALGLPAS-LALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQ
.::. .:::: ...: ::.:.. : :.:. .. : . : .:....: .: ::: .
NP_004 TPLTDAGKAFSIAFALLGVPTTMLLLTASAQRLSLLLTHVPLSWLSMRWGWDPRRAACWH
120 130 140 150 160 170
180 190 200 210 220
pF1KE5 AVAL-GLLVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRG-----R
::: :..:. : :.::... :. :.: : :::: ::::::: : .::.. :
NP_004 LVALLGVVVTVCF-LVPAVIFAHLEEAWSFLDAFYFCFISLSTIGLGDYVPGEAPGQPYR
180 190 200 210 220 230
230 240 250
pF1KE5 SLHPV---IY-HLGQLALLGGGTSLQGTAWEG
.:. : .: :: .:..
NP_004 ALYKVLVTVYLFLGLVAMVLVLQTFRHVSDLHGLTELILLPPPCPASFNADEDDRVDILG
240 250 260 270 280 290
>>XP_011507825 (OMIM: 603219) PREDICTED: potassium chann (370 aa)
initn: 288 init1: 227 opt: 389 Z-score: 449.9 bits: 91.3 E(85289): 2.6e-18
Smith-Waterman score: 389; 31.5% identity (63.5% similar) in 219 aa overlap (7-221:3-219)
10 20 30 40 50 60
pF1KE5 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP
:. . . .. .: : .::.::.::: : .. . . .: ..: .:.
XP_011 MKWKTVSTIFLVVVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQH-SCVNS
10 20 30 40 50
70 80 90 100 110
pF1KE5 GALEELLGTALATQAHGVSTLGNSSEGRT-WDLPSALLFAASILTTTGYGHMAPLSPGGK
:.::. .:. :. :::.:. . ::: :...::....:: :.:...: . :::
XP_011 TELDELIQQIVAAINAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 AFCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVA---VHWQLSPARAALLQAVALGL
::..:: ::.: :.: . : .... : : ..:..: .. ..... . :
XP_011 IFCIIYALLGIPLFGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFIL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 LVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQL
. :: :::... ..: : : :.:: .:.:::. : . :
XP_011 FGCVLFVALPAIIFKHIEGW-SALDAIYFVVITLTTIGFGDYVAGGSDIEYLDFYKPVVW
180 190 200 210 220 230
240 250
pF1KE5 ALLGGGTSLQGTAWEG
XP_011 FWILVGLAYFAAVLSMIGDWLRVISKKTKEEVGEFRAHAAEWTANVTAEFKETRRRLSVE
240 250 260 270 280 290
>>XP_011507824 (OMIM: 603219) PREDICTED: potassium chann (370 aa)
initn: 288 init1: 227 opt: 389 Z-score: 449.9 bits: 91.3 E(85289): 2.6e-18
Smith-Waterman score: 389; 31.5% identity (63.5% similar) in 219 aa overlap (7-221:3-219)
10 20 30 40 50 60
pF1KE5 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP
:. . . .. .: : .::.::.::: : .. . . .: ..: .:.
XP_011 MKWKTVSTIFLVVVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQH-SCVNS
10 20 30 40 50
70 80 90 100 110
pF1KE5 GALEELLGTALATQAHGVSTLGNSSEGRT-WDLPSALLFAASILTTTGYGHMAPLSPGGK
:.::. .:. :. :::.:. . ::: :...::....:: :.:...: . :::
XP_011 TELDELIQQIVAAINAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 AFCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVA---VHWQLSPARAALLQAVALGL
::..:: ::.: :.: . : .... : : ..:..: .. ..... . :
XP_011 IFCIIYALLGIPLFGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFIL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 LVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQL
. :: :::... ..: : : :.:: .:.:::. : . :
XP_011 FGCVLFVALPAIIFKHIEGW-SALDAIYFVVITLTTIGFGDYVAGGSDIEYLDFYKPVVW
180 190 200 210 220 230
240 250
pF1KE5 ALLGGGTSLQGTAWEG
XP_011 FWILVGLAYFAAVLSMIGDWLRVISKKTKEEVGEFRAHAAEWTANVTAEFKETRRRLSVE
240 250 260 270 280 290
>>XP_011507826 (OMIM: 603219) PREDICTED: potassium chann (370 aa)
initn: 288 init1: 227 opt: 389 Z-score: 449.9 bits: 91.3 E(85289): 2.6e-18
Smith-Waterman score: 389; 31.5% identity (63.5% similar) in 219 aa overlap (7-221:3-219)
10 20 30 40 50 60
pF1KE5 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP
:. . . .. .: : .::.::.::: : .. . . .: ..: .:.
XP_011 MKWKTVSTIFLVVVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQH-SCVNS
10 20 30 40 50
70 80 90 100 110
pF1KE5 GALEELLGTALATQAHGVSTLGNSSEGRT-WDLPSALLFAASILTTTGYGHMAPLSPGGK
:.::. .:. :. :::.:. . ::: :...::....:: :.:...: . :::
XP_011 TELDELIQQIVAAINAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 AFCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVA---VHWQLSPARAALLQAVALGL
::..:: ::.: :.: . : .... : : ..:..: .. ..... . :
XP_011 IFCIIYALLGIPLFGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFIL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 LVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQL
. :: :::... ..: : : :.:: .:.:::. : . :
XP_011 FGCVLFVALPAIIFKHIEGW-SALDAIYFVVITLTTIGFGDYVAGGSDIEYLDFYKPVVW
180 190 200 210 220 230
240 250
pF1KE5 ALLGGGTSLQGTAWEG
XP_011 FWILVGLAYFAAVLSMIGDWLRVISKKTKEEVGEFRAHAAEWTANVTAEFKETRRRLSVE
240 250 260 270 280 290
>>NP_055032 (OMIM: 603219) potassium channel subfamily K (411 aa)
initn: 288 init1: 227 opt: 389 Z-score: 449.2 bits: 91.4 E(85289): 2.8e-18
Smith-Waterman score: 389; 31.5% identity (63.5% similar) in 219 aa overlap (7-221:44-260)
10 20 30
pF1KE5 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPA
:. . . .. .: : .::.::.::: :
NP_055 QNSKPRLSFSTKPTVLASRVESDTTINVMKWKTVSTIFLVVVLYLIIGATVFKALEQPHE
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE5 CRLQAELRAELAAFQAEHRACLPPGALEELLGTALATQAHGVSTLGNSSEGRT-WDLPSA
.. . . .: ..: .:. :.::. .:. :. :::.:. . ::: :.
NP_055 ISQRTTIVIQKQTFISQH-SCVNSTELDELIQQIVAAINAGIIPLGNTSNQISHWDLGSS
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE5 LLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLPASLALVATLRHCLLPVLSRPRAWV
..::....:: :.:...: . ::: ::..:: ::.: :.: . : .... : :
NP_055 FFFAGTVITTIGFGNISPRTEGGKIFCIIYALLGIPLFGFLLAGVGDQLGTIFGKGIAKV
140 150 160 170 180 190
160 170 180 190 200 210
pF1KE5 A---VHWQLSPARAALLQAVALGLLVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLST
..:..: .. ..... . :. :: :::... ..: : : :.:: .:.:
NP_055 EDTFIKWNVSQTKIRIISTIIFILFGCVLFVALPAIIFKHIEGW-SALDAIYFVVITLTT
200 210 220 230 240 250
220 230 240 250
pF1KE5 IGLEDLLPGRGRSLHPVIYHLGQLALLGGGTSLQGTAWEG
::. : . :
NP_055 IGFGDYVAGGSDIEYLDFYKPVVWFWILVGLAYFAAVLSMIGDWLRVISKKTKEEVGEFR
260 270 280 290 300 310
252 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 23:27:06 2016 done: Mon Nov 7 23:27:07 2016
Total Scan time: 7.090 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]