Result of FASTA (omim) for
pFN21AE5280
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5280, 248 aa
1>>>pF1KE5280 248 - 248 aa - 248 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.0015+/-0.000376; mu= 10.8780+/- 0.024
mean_var=315.6271+/-67.144, 0's: 0 Z-trim(122.1): 77 B-trim: 0 in 0/56
Lambda= 0.072192
statistics sampled from 39707 (39816) to 39707 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.784), E-opt: 0.2 (0.467), width: 16
Scan time: 7.190
The best scores are: opt bits E(85289)
NP_008855 (OMIM: 600812) serine/arginine-rich spli ( 248) 1724 192.2 7.1e-49
NP_001071634 (OMIM: 600812) serine/arginine-rich s ( 201) 1307 148.7 7.5e-36
NP_003760 (OMIM: 601943) serine/arginine-rich spli ( 221) 977 114.4 1.8e-25
XP_011540253 (OMIM: 601940) PREDICTED: serine/argi ( 464) 601 75.7 1.6e-13
NP_006266 (OMIM: 601944) serine/arginine-rich spli ( 344) 598 75.2 1.7e-13
NP_005617 (OMIM: 601940) serine/arginine-rich spli ( 494) 599 75.6 1.9e-13
NP_008856 (OMIM: 600914) serine/arginine-rich spli ( 272) 593 74.5 2.1e-13
NP_001034554 (OMIM: 600914) serine/arginine-rich s ( 272) 593 74.5 2.1e-13
NP_001307143 (OMIM: 600914) serine/arginine-rich s ( 272) 593 74.5 2.1e-13
XP_005268056 (OMIM: 600914) PREDICTED: serine/argi ( 271) 591 74.3 2.5e-13
XP_005268057 (OMIM: 600914) PREDICTED: serine/argi ( 271) 591 74.3 2.5e-13
XP_016877082 (OMIM: 600914) PREDICTED: serine/argi ( 271) 591 74.3 2.5e-13
XP_011535379 (OMIM: 600914) PREDICTED: serine/argi ( 239) 340 48.1 1.7e-05
XP_005264541 (OMIM: 600572) PREDICTED: serine/argi ( 235) 315 45.5 0.0001
XP_016872631 (OMIM: 603269) PREDICTED: serine/argi ( 282) 301 44.1 0.00031
NP_115285 (OMIM: 603269) serine/arginine-rich spli ( 282) 301 44.1 0.00031
NP_001026854 (OMIM: 600572) serine/arginine-rich s ( 238) 299 43.8 0.00033
XP_005264542 (OMIM: 600572) PREDICTED: serine/argi ( 223) 269 40.6 0.0028
NP_003008 (OMIM: 603364) serine/arginine-rich spli ( 164) 257 39.2 0.0057
NP_001182375 (OMIM: 600572) serine/arginine-rich s ( 226) 259 39.6 0.0058
>>NP_008855 (OMIM: 600812) serine/arginine-rich splicing (248 aa)
initn: 1724 init1: 1724 opt: 1724 Z-score: 998.5 bits: 192.2 E(85289): 7.1e-49
Smith-Waterman score: 1724; 100.0% identity (100.0% similar) in 248 aa overlap (1-248:1-248)
10 20 30 40 50 60
pF1KE5 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 RSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 RSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPR
190 200 210 220 230 240
pF1KE5 HSRSRSRT
::::::::
NP_008 HSRSRSRT
>>NP_001071634 (OMIM: 600812) serine/arginine-rich splic (201 aa)
initn: 1303 init1: 1303 opt: 1307 Z-score: 764.6 bits: 148.7 E(85289): 7.5e-36
Smith-Waterman score: 1307; 96.9% identity (98.4% similar) in 192 aa overlap (1-192:1-190)
10 20 30 40 50 60
pF1KE5 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 RSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPR
:::: ..: :.
NP_001 RSHE--VGYTRILFFDQNWIQWS
190 200
>>NP_003760 (OMIM: 601943) serine/arginine-rich splicing (221 aa)
initn: 1019 init1: 549 opt: 977 Z-score: 578.5 bits: 114.4 E(85289): 1.8e-25
Smith-Waterman score: 1004; 66.8% identity (78.8% similar) in 241 aa overlap (1-239:1-217)
10 20 30 40 50 60
pF1KE5 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
::: . :: :..: :::::::: :.: ::.::.::::: ::.:.::::.: :::::.
NP_003 MSGWADERG--GEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVR
10 20 30 40 50
70 80 90 100 110
pF1KE5 FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRG-RYGPPSRRS
::::::::::.:::.:::: ::::::::. :: :: ::: : :::.:::
NP_003 FEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTY---------GGRGGWPRGGRNGPPTRRS
60 70 80 90 100
120 130 140 150 160 170
pF1KE5 ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTK
. ::.:::::::::::::::::::::::::::: .::.:.::..::::: ::.::::.::
NP_003 DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTK
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE5 FRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRY-S
::::::::.:::: . :: ::: ::::: ::.:. :: .:::::.: :
NP_003 FRSHEGETSYIRVYPE--RSTSYGYSRSRSGSRGRD-----------SPYQSRGSPHYFS
170 180 190 200 210
240
pF1KE5 PRHSRSRSRT
:
NP_003 PFRPY
220
>>XP_011540253 (OMIM: 601940) PREDICTED: serine/arginine (464 aa)
initn: 797 init1: 200 opt: 601 Z-score: 363.9 bits: 75.7 E(85289): 1.6e-13
Smith-Waterman score: 601; 47.1% identity (64.6% similar) in 240 aa overlap (17-248:3-229)
10 20 30 40 50 60
pF1KE5 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
:.:.: : . : .:.: : :: : ..:::: : :::
XP_011 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYG-----FVE
10 20 30 40
70 80 90 100 110
pF1KE5 FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGG---APRGRYGPPSR
:.: :::.:::: .: : : :. :: :. : : :.: .: : . : .::::.:
XP_011 FDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTR
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE5 RSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVY--RDGTGVVEFVRKEDMTYAVRKL
.: :..: .: :::::::.::.::.: :::.. : . ::.::: :: :..::
XP_011 -TEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE5 DNTKFRSHEGETAYIRVKVDGP---RSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSR
:.:. ... ::. : : : :: :::::.::: :::::.::::: : ::.
XP_011 DGTEVNGRK-----IRLVEDKPGSRRRRSY--SRSRSHSRSGSRSRSKSRSRSQSRSRSK
170 180 190 200 210
240
pF1KE5 GSPRYSPRHSRSRSRT
:: . .::::.
XP_011 KEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSR
220 230 240 250 260 270
>>NP_006266 (OMIM: 601944) serine/arginine-rich splicing (344 aa)
initn: 1280 init1: 210 opt: 598 Z-score: 363.4 bits: 75.2 E(85289): 1.7e-13
Smith-Waterman score: 598; 46.9% identity (65.8% similar) in 243 aa overlap (17-248:3-238)
10 20 30 40 50 60
pF1KE5 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
:.:.: : ..: :::. : :: . ..:::: : :::
NP_006 MPRVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYG-----FVE
10 20 30 40
70 80 90 100 110
pF1KE5 FEDPRDAEDAVYGRDGYDYDGYRLRVEF---PRSGR-GTGRGGGGGGGGGAPR---GR--
::: :::.:::: .: . : :. :: :: : : . :. .:::: . : ::
NP_006 FEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDK
50 60 70 80 90 100
120 130 140 150 160
pF1KE5 YGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGT--GVVEFVRKEDMT
:::: : .: :..: .: ::::::: ::.::.: :::.... : ::.:: ::
NP_006 YGPPVR-TEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMK
110 120 130 140 150 160
170 180 190 200 210 220
pF1KE5 YAVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPR
:. :::.:.. ... . . ... :: : .::::::: ::::::: .::::: :
NP_006 RALDKLDGTEINGRNIRLIEDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSIS
170 180 190 200 210 220
230 240
pF1KE5 RSRGSPRYSPRHSRSRSRT
.::. : : ..:::::.
NP_006 KSRSRSR-SRSKGRSRSRSKGRKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSR
230 240 250 260 270
>>NP_005617 (OMIM: 601940) serine/arginine-rich splicing (494 aa)
initn: 712 init1: 184 opt: 599 Z-score: 362.5 bits: 75.6 E(85289): 1.9e-13
Smith-Waterman score: 599; 46.5% identity (65.1% similar) in 241 aa overlap (17-248:3-232)
10 20 30 40 50 60
pF1KE5 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
:.:.: : . : .:.: : :: : ..:::: : :::
NP_005 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYG-----FVE
10 20 30 40
70 80 90 100 110
pF1KE5 FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGG---APRGRYGPPSR
:.: :::.:::: .: : : :. :: :. : : :.: .: : . : .::::.:
NP_005 FDDLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTR
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE5 RSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVY--RDGTGVVEFVRKEDMTYAVRKL
.: :..: .: :::::::.::.::.: :::.. : . ::.::: :: :..::
NP_005 -TEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE5 DNTKFRSHEGETAYIRVKVDGP---RSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSR
:.:. ... ::. : : : ::.::::.:::::::: .::::: : . :.
NP_005 DGTEVNGRK-----IRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSH
170 180 190 200 210
240
pF1KE5 GSPRYSPRH-SRSRSRT
.. : : :::::..
NP_005 SKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEE
220 230 240 250 260 270
>>NP_008856 (OMIM: 600914) serine/arginine-rich splicing (272 aa)
initn: 304 init1: 238 opt: 593 Z-score: 361.5 bits: 74.5 E(85289): 2.1e-13
Smith-Waterman score: 593; 47.3% identity (67.1% similar) in 243 aa overlap (16-248:4-233)
10 20 30 40 50 60
pF1KE5 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
::...: : : : ::.: : :: ::::::: :: :.:::
NP_008 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLK--RG---FGFVE
10 20 30 40
70 80 90 100 110
pF1KE5 FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRS-GRGTGRGGGGGG---GGGAPRG-RYGPP
:::::::.:::: :: . . :. .: :. .:: ::: : . .. ::. : . :
NP_008 FEDPRDADDAVYELDGKELCSERVTIEHARARSRG-GRGRGRYSDRFSSRRPRNDRRNAP
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE5 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GTGVVEFVRKEDMTYAVR
:.:::..: .: ::::::: ::.::.: .::..: . :::::. :. :..
NP_008 PVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIE
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE5 KLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRS---YSPRR
::.. .. ... :.. ..: . : .:::::::.:: ::::: ::::: :: :
NP_008 KLSGKEINGRK-----IKL-IEGSKRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSR
170 180 190 200 210
240
pF1KE5 SRGSPRYSPRHSRSRSRT
::. : : .::: ::.
NP_008 SRSRSR-SRSKSRSVSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN
220 230 240 250 260 270
>>NP_001034554 (OMIM: 600914) serine/arginine-rich splic (272 aa)
initn: 304 init1: 238 opt: 593 Z-score: 361.5 bits: 74.5 E(85289): 2.1e-13
Smith-Waterman score: 593; 47.3% identity (67.1% similar) in 243 aa overlap (16-248:4-233)
10 20 30 40 50 60
pF1KE5 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
::...: : : : ::.: : :: ::::::: :: :.:::
NP_001 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLK--RG---FGFVE
10 20 30 40
70 80 90 100 110
pF1KE5 FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRS-GRGTGRGGGGGG---GGGAPRG-RYGPP
:::::::.:::: :: . . :. .: :. .:: ::: : . .. ::. : . :
NP_001 FEDPRDADDAVYELDGKELCSERVTIEHARARSRG-GRGRGRYSDRFSSRRPRNDRRNAP
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE5 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GTGVVEFVRKEDMTYAVR
:.:::..: .: ::::::: ::.::.: .::..: . :::::. :. :..
NP_001 PVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIE
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE5 KLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRS---YSPRR
::.. .. ... :.. ..: . : .:::::::.:: ::::: ::::: :: :
NP_001 KLSGKEINGRK-----IKL-IEGSKRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSR
170 180 190 200 210
240
pF1KE5 SRGSPRYSPRHSRSRSRT
::. : : .::: ::.
NP_001 SRSRSR-SRSKSRSVSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN
220 230 240 250 260 270
>>NP_001307143 (OMIM: 600914) serine/arginine-rich splic (272 aa)
initn: 304 init1: 238 opt: 593 Z-score: 361.5 bits: 74.5 E(85289): 2.1e-13
Smith-Waterman score: 593; 47.3% identity (67.1% similar) in 243 aa overlap (16-248:4-233)
10 20 30 40 50 60
pF1KE5 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
::...: : : : ::.: : :: ::::::: :: :.:::
NP_001 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLK--RG---FGFVE
10 20 30 40
70 80 90 100 110
pF1KE5 FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRS-GRGTGRGGGGGG---GGGAPRG-RYGPP
:::::::.:::: :: . . :. .: :. .:: ::: : . .. ::. : . :
NP_001 FEDPRDADDAVYELDGKELCSERVTIEHARARSRG-GRGRGRYSDRFSSRRPRNDRRNAP
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE5 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GTGVVEFVRKEDMTYAVR
:.:::..: .: ::::::: ::.::.: .::..: . :::::. :. :..
NP_001 PVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIE
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE5 KLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRS---YSPRR
::.. .. ... :.. ..: . : .:::::::.:: ::::: ::::: :: :
NP_001 KLSGKEINGRK-----IKL-IEGSKRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSR
170 180 190 200 210
240
pF1KE5 SRGSPRYSPRHSRSRSRT
::. : : .::: ::.
NP_001 SRSRSR-SRSKSRSVSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN
220 230 240 250 260 270
>>XP_005268056 (OMIM: 600914) PREDICTED: serine/arginine (271 aa)
initn: 949 init1: 182 opt: 591 Z-score: 360.4 bits: 74.3 E(85289): 2.5e-13
Smith-Waterman score: 591; 47.7% identity (66.8% similar) in 241 aa overlap (16-248:4-232)
10 20 30 40 50 60
pF1KE5 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
::...: : : : ::.: : :: ::::::: :: :.:::
XP_005 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLK--RG---FGFVE
10 20 30 40
70 80 90 100 110
pF1KE5 FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRS-GRGTGRGGGGGG---GGGAPRG-RYGPP
:::::::.:::: :: . . :. .: :. .:: ::: : . .. ::. : . :
XP_005 FEDPRDADDAVYELDGKELCSERVTIEHARARSRG-GRGRGRYSDRFSSRRPRNDRRNAP
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE5 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD--GTGVVEFVRKEDMTYAVR
:.:::..: .: ::::::: ::.::.: .::..: . :::::. :. :..
XP_005 PVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIE
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE5 KLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSR-SYSPRRSR
::.. .. ... :.. . : : .:::::.:: ::::::: :::: ::: :::
XP_005 KLSGKEINGRK-----IKLIEGSKRHRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSR
170 180 190 200 210
240
pF1KE5 GSPRYSPRHSRSRSRT
. : : .::: ::.
XP_005 SRSR-SRSKSRSVSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN
220 230 240 250 260 270
248 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 23:22:34 2016 done: Mon Nov 7 23:22:35 2016
Total Scan time: 7.190 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]