Result of FASTA (omim) for
pFN21AE5222
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5222, 256 aa
1>>>pF1KE5222 256 - 256 aa - 256 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2918+/-0.000364; mu= 14.7959+/- 0.023
mean_var=62.9032+/-12.790, 0's: 0 Z-trim(112.2): 41 B-trim: 277 in 1/51
Lambda= 0.161710
statistics sampled from 21034 (21075) to 21034 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.631), E-opt: 0.2 (0.247), width: 16
Scan time: 5.900
The best scores are: opt bits E(85289)
NP_065730 (OMIM: 612072) MIF4G domain-containing p ( 256) 1715 408.7 5.4e-114
NP_001229429 (OMIM: 612072) MIF4G domain-containin ( 256) 1715 408.7 5.4e-114
XP_011523354 (OMIM: 612072) PREDICTED: MIF4G domai ( 324) 1715 408.7 6.6e-114
XP_005257587 (OMIM: 612072) PREDICTED: MIF4G domai ( 263) 1691 403.1 2.7e-112
NP_001229427 (OMIM: 612072) MIF4G domain-containin ( 263) 1691 403.1 2.7e-112
XP_011523353 (OMIM: 612072) PREDICTED: MIF4G domai ( 331) 1691 403.1 3.2e-112
XP_016880383 (OMIM: 612072) PREDICTED: MIF4G domai ( 222) 1306 313.2 2.5e-85
XP_016880382 (OMIM: 612072) PREDICTED: MIF4G domai ( 222) 1306 313.2 2.5e-85
XP_005257589 (OMIM: 612072) PREDICTED: MIF4G domai ( 222) 1306 313.2 2.5e-85
XP_005257590 (OMIM: 612072) PREDICTED: MIF4G domai ( 222) 1306 313.2 2.5e-85
NP_001229430 (OMIM: 612072) MIF4G domain-containin ( 222) 1306 313.2 2.5e-85
XP_011523355 (OMIM: 612072) PREDICTED: MIF4G domai ( 290) 1306 313.3 3.2e-85
XP_016880380 (OMIM: 612072) PREDICTED: MIF4G domai ( 277) 1207 290.2 2.7e-78
XP_016880379 (OMIM: 612072) PREDICTED: MIF4G domai ( 277) 1207 290.2 2.7e-78
XP_016880378 (OMIM: 612072) PREDICTED: MIF4G domai ( 277) 1207 290.2 2.7e-78
XP_016880377 (OMIM: 612072) PREDICTED: MIF4G domai ( 345) 1207 290.2 3.3e-78
XP_011523359 (OMIM: 612072) PREDICTED: MIF4G domai ( 170) 704 172.7 3.8e-43
XP_016880384 (OMIM: 612072) PREDICTED: MIF4G domai ( 204) 704 172.7 4.4e-43
XP_011523357 (OMIM: 612072) PREDICTED: MIF4G domai ( 238) 704 172.8 5.1e-43
XP_011523356 (OMIM: 612072) PREDICTED: MIF4G domai ( 279) 704 172.8 5.8e-43
XP_011524580 (OMIM: 613178) PREDICTED: CBP80/20-de ( 575) 340 88.0 3.9e-17
XP_011524581 (OMIM: 613178) PREDICTED: CBP80/20-de ( 598) 340 88.0 4.1e-17
NP_055587 (OMIM: 613178) CBP80/20-dependent transl ( 598) 340 88.0 4.1e-17
XP_006722652 (OMIM: 613178) PREDICTED: CBP80/20-de ( 600) 340 88.1 4.1e-17
NP_001135869 (OMIM: 613178) CBP80/20-dependent tra ( 600) 340 88.1 4.1e-17
XP_006722650 (OMIM: 613178) PREDICTED: CBP80/20-de ( 600) 340 88.1 4.1e-17
XP_016881591 (OMIM: 613178) PREDICTED: CBP80/20-de ( 600) 340 88.1 4.1e-17
XP_006722651 (OMIM: 613178) PREDICTED: CBP80/20-de ( 600) 340 88.1 4.1e-17
XP_006722649 (OMIM: 613178) PREDICTED: CBP80/20-de ( 614) 340 88.1 4.2e-17
XP_016881590 (OMIM: 613178) PREDICTED: CBP80/20-de ( 616) 340 88.1 4.2e-17
XP_016881589 (OMIM: 613178) PREDICTED: CBP80/20-de ( 616) 340 88.1 4.2e-17
XP_006722646 (OMIM: 613178) PREDICTED: CBP80/20-de ( 616) 340 88.1 4.2e-17
XP_005258449 (OMIM: 613178) PREDICTED: CBP80/20-de ( 616) 340 88.1 4.2e-17
XP_016880381 (OMIM: 612072) PREDICTED: MIF4G domai ( 252) 256 68.3 1.5e-11
>>NP_065730 (OMIM: 612072) MIF4G domain-containing prote (256 aa)
initn: 1715 init1: 1715 opt: 1715 Z-score: 2167.6 bits: 408.7 E(85289): 5.4e-114
Smith-Waterman score: 1715; 100.0% identity (100.0% similar) in 256 aa overlap (1-256:1-256)
10 20 30 40 50 60
pF1KE5 MGEPSREEYKIQSFDAETQQLLKTALKVACFETEDGEYSVCQRSYSNCSRLMPSRCNTQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MGEPSREEYKIQSFDAETQQLLKTALKVACFETEDGEYSVCQRSYSNCSRLMPSRCNTQY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 RDPGAVDLEKVANVIVDHSLQDCVFSKEAGRMCYAIIQAESKQAGQSVFRRGLLNRLQQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 RDPGAVDLEKVANVIVDHSLQDCVFSKEAGRMCYAIIQAESKQAGQSVFRRGLLNRLQQE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 YQAREQLRARSLQGWVCYVTFICNIFDYLRVNNMPMMALVNPVYDCLFRLAQPDSLSKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 YQAREQLRARSLQGWVCYVTFICNIFDYLRVNNMPMMALVNPVYDCLFRLAQPDSLSKEE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 EVDCLVLQLHRVGEQLEKMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEIIEFRAAGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 EVDCLVLQLHRVGEQLEKMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEIIEFRAAGW
190 200 210 220 230 240
250
pF1KE5 KTTPAAHKYYYSEVSD
::::::::::::::::
NP_065 KTTPAAHKYYYSEVSD
250
>>NP_001229429 (OMIM: 612072) MIF4G domain-containing pr (256 aa)
initn: 1715 init1: 1715 opt: 1715 Z-score: 2167.6 bits: 408.7 E(85289): 5.4e-114
Smith-Waterman score: 1715; 100.0% identity (100.0% similar) in 256 aa overlap (1-256:1-256)
10 20 30 40 50 60
pF1KE5 MGEPSREEYKIQSFDAETQQLLKTALKVACFETEDGEYSVCQRSYSNCSRLMPSRCNTQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGEPSREEYKIQSFDAETQQLLKTALKVACFETEDGEYSVCQRSYSNCSRLMPSRCNTQY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 RDPGAVDLEKVANVIVDHSLQDCVFSKEAGRMCYAIIQAESKQAGQSVFRRGLLNRLQQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RDPGAVDLEKVANVIVDHSLQDCVFSKEAGRMCYAIIQAESKQAGQSVFRRGLLNRLQQE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 YQAREQLRARSLQGWVCYVTFICNIFDYLRVNNMPMMALVNPVYDCLFRLAQPDSLSKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YQAREQLRARSLQGWVCYVTFICNIFDYLRVNNMPMMALVNPVYDCLFRLAQPDSLSKEE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 EVDCLVLQLHRVGEQLEKMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEIIEFRAAGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVDCLVLQLHRVGEQLEKMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEIIEFRAAGW
190 200 210 220 230 240
250
pF1KE5 KTTPAAHKYYYSEVSD
::::::::::::::::
NP_001 KTTPAAHKYYYSEVSD
250
>>XP_011523354 (OMIM: 612072) PREDICTED: MIF4G domain-co (324 aa)
initn: 1715 init1: 1715 opt: 1715 Z-score: 2166.0 bits: 408.7 E(85289): 6.6e-114
Smith-Waterman score: 1715; 100.0% identity (100.0% similar) in 256 aa overlap (1-256:69-324)
10 20 30
pF1KE5 MGEPSREEYKIQSFDAETQQLLKTALKVAC
::::::::::::::::::::::::::::::
XP_011 LALTRHLPGPATSGAVLIPSPVKSYRGWLVMGEPSREEYKIQSFDAETQQLLKTALKVAC
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE5 FETEDGEYSVCQRSYSNCSRLMPSRCNTQYRDPGAVDLEKVANVIVDHSLQDCVFSKEAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FETEDGEYSVCQRSYSNCSRLMPSRCNTQYRDPGAVDLEKVANVIVDHSLQDCVFSKEAG
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE5 RMCYAIIQAESKQAGQSVFRRGLLNRLQQEYQAREQLRARSLQGWVCYVTFICNIFDYLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RMCYAIIQAESKQAGQSVFRRGLLNRLQQEYQAREQLRARSLQGWVCYVTFICNIFDYLR
160 170 180 190 200 210
160 170 180 190 200 210
pF1KE5 VNNMPMMALVNPVYDCLFRLAQPDSLSKEEEVDCLVLQLHRVGEQLEKMNGQRMDELFVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VNNMPMMALVNPVYDCLFRLAQPDSLSKEEEVDCLVLQLHRVGEQLEKMNGQRMDELFVL
220 230 240 250 260 270
220 230 240 250
pF1KE5 IRDGFLLPTGLSSLAQLLLLEIIEFRAAGWKTTPAAHKYYYSEVSD
::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IRDGFLLPTGLSSLAQLLLLEIIEFRAAGWKTTPAAHKYYYSEVSD
280 290 300 310 320
>>XP_005257587 (OMIM: 612072) PREDICTED: MIF4G domain-co (263 aa)
initn: 1546 init1: 1546 opt: 1691 Z-score: 2137.2 bits: 403.1 E(85289): 2.7e-112
Smith-Waterman score: 1691; 97.3% identity (97.3% similar) in 263 aa overlap (1-256:1-263)
10 20 30 40 50
pF1KE5 MGEPSREEYKIQSFDAETQQLLKTALK-------VACFETEDGEYSVCQRSYSNCSRLMP
::::::::::::::::::::::::::: ::::::::::::::::::::::::::
XP_005 MGEPSREEYKIQSFDAETQQLLKTALKAPSLECTVACFETEDGEYSVCQRSYSNCSRLMP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 SRCNTQYRDPGAVDLEKVANVIVDHSLQDCVFSKEAGRMCYAIIQAESKQAGQSVFRRGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SRCNTQYRDPGAVDLEKVANVIVDHSLQDCVFSKEAGRMCYAIIQAESKQAGQSVFRRGL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE5 LNRLQQEYQAREQLRARSLQGWVCYVTFICNIFDYLRVNNMPMMALVNPVYDCLFRLAQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LNRLQQEYQAREQLRARSLQGWVCYVTFICNIFDYLRVNNMPMMALVNPVYDCLFRLAQP
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE5 DSLSKEEEVDCLVLQLHRVGEQLEKMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DSLSKEEEVDCLVLQLHRVGEQLEKMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEII
190 200 210 220 230 240
240 250
pF1KE5 EFRAAGWKTTPAAHKYYYSEVSD
:::::::::::::::::::::::
XP_005 EFRAAGWKTTPAAHKYYYSEVSD
250 260
>>NP_001229427 (OMIM: 612072) MIF4G domain-containing pr (263 aa)
initn: 1546 init1: 1546 opt: 1691 Z-score: 2137.2 bits: 403.1 E(85289): 2.7e-112
Smith-Waterman score: 1691; 97.3% identity (97.3% similar) in 263 aa overlap (1-256:1-263)
10 20 30 40 50
pF1KE5 MGEPSREEYKIQSFDAETQQLLKTALK-------VACFETEDGEYSVCQRSYSNCSRLMP
::::::::::::::::::::::::::: ::::::::::::::::::::::::::
NP_001 MGEPSREEYKIQSFDAETQQLLKTALKAPSLECTVACFETEDGEYSVCQRSYSNCSRLMP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 SRCNTQYRDPGAVDLEKVANVIVDHSLQDCVFSKEAGRMCYAIIQAESKQAGQSVFRRGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRCNTQYRDPGAVDLEKVANVIVDHSLQDCVFSKEAGRMCYAIIQAESKQAGQSVFRRGL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE5 LNRLQQEYQAREQLRARSLQGWVCYVTFICNIFDYLRVNNMPMMALVNPVYDCLFRLAQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNRLQQEYQAREQLRARSLQGWVCYVTFICNIFDYLRVNNMPMMALVNPVYDCLFRLAQP
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE5 DSLSKEEEVDCLVLQLHRVGEQLEKMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSLSKEEEVDCLVLQLHRVGEQLEKMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEII
190 200 210 220 230 240
240 250
pF1KE5 EFRAAGWKTTPAAHKYYYSEVSD
:::::::::::::::::::::::
NP_001 EFRAAGWKTTPAAHKYYYSEVSD
250 260
>>XP_011523353 (OMIM: 612072) PREDICTED: MIF4G domain-co (331 aa)
initn: 1546 init1: 1546 opt: 1691 Z-score: 2135.6 bits: 403.1 E(85289): 3.2e-112
Smith-Waterman score: 1691; 97.3% identity (97.3% similar) in 263 aa overlap (1-256:69-331)
10 20
pF1KE5 MGEPSREEYKIQSFDAETQQLLKTALK---
:::::::::::::::::::::::::::
XP_011 LALTRHLPGPATSGAVLIPSPVKSYRGWLVMGEPSREEYKIQSFDAETQQLLKTALKAPS
40 50 60 70 80 90
30 40 50 60 70 80
pF1KE5 ----VACFETEDGEYSVCQRSYSNCSRLMPSRCNTQYRDPGAVDLEKVANVIVDHSLQDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LECTVACFETEDGEYSVCQRSYSNCSRLMPSRCNTQYRDPGAVDLEKVANVIVDHSLQDC
100 110 120 130 140 150
90 100 110 120 130 140
pF1KE5 VFSKEAGRMCYAIIQAESKQAGQSVFRRGLLNRLQQEYQAREQLRARSLQGWVCYVTFIC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VFSKEAGRMCYAIIQAESKQAGQSVFRRGLLNRLQQEYQAREQLRARSLQGWVCYVTFIC
160 170 180 190 200 210
150 160 170 180 190 200
pF1KE5 NIFDYLRVNNMPMMALVNPVYDCLFRLAQPDSLSKEEEVDCLVLQLHRVGEQLEKMNGQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NIFDYLRVNNMPMMALVNPVYDCLFRLAQPDSLSKEEEVDCLVLQLHRVGEQLEKMNGQR
220 230 240 250 260 270
210 220 230 240 250
pF1KE5 MDELFVLIRDGFLLPTGLSSLAQLLLLEIIEFRAAGWKTTPAAHKYYYSEVSD
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDELFVLIRDGFLLPTGLSSLAQLLLLEIIEFRAAGWKTTPAAHKYYYSEVSD
280 290 300 310 320 330
>>XP_016880383 (OMIM: 612072) PREDICTED: MIF4G domain-co (222 aa)
initn: 1306 init1: 1306 opt: 1306 Z-score: 1652.9 bits: 313.2 E(85289): 2.5e-85
Smith-Waterman score: 1391; 86.7% identity (86.7% similar) in 256 aa overlap (1-256:1-222)
10 20 30 40 50 60
pF1KE5 MGEPSREEYKIQSFDAETQQLLKTALKVACFETEDGEYSVCQRSYSNCSRLMPSRCNTQY
:::::::::::::::::::::::::::
XP_016 MGEPSREEYKIQSFDAETQQLLKTALK---------------------------------
10 20
70 80 90 100 110 120
pF1KE5 RDPGAVDLEKVANVIVDHSLQDCVFSKEAGRMCYAIIQAESKQAGQSVFRRGLLNRLQQE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 -DPGAVDLEKVANVIVDHSLQDCVFSKEAGRMCYAIIQAESKQAGQSVFRRGLLNRLQQE
30 40 50 60 70 80
130 140 150 160 170 180
pF1KE5 YQAREQLRARSLQGWVCYVTFICNIFDYLRVNNMPMMALVNPVYDCLFRLAQPDSLSKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YQAREQLRARSLQGWVCYVTFICNIFDYLRVNNMPMMALVNPVYDCLFRLAQPDSLSKEE
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE5 EVDCLVLQLHRVGEQLEKMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEIIEFRAAGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVDCLVLQLHRVGEQLEKMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEIIEFRAAGW
150 160 170 180 190 200
250
pF1KE5 KTTPAAHKYYYSEVSD
::::::::::::::::
XP_016 KTTPAAHKYYYSEVSD
210 220
>>XP_016880382 (OMIM: 612072) PREDICTED: MIF4G domain-co (222 aa)
initn: 1306 init1: 1306 opt: 1306 Z-score: 1652.9 bits: 313.2 E(85289): 2.5e-85
Smith-Waterman score: 1391; 86.7% identity (86.7% similar) in 256 aa overlap (1-256:1-222)
10 20 30 40 50 60
pF1KE5 MGEPSREEYKIQSFDAETQQLLKTALKVACFETEDGEYSVCQRSYSNCSRLMPSRCNTQY
:::::::::::::::::::::::::::
XP_016 MGEPSREEYKIQSFDAETQQLLKTALK---------------------------------
10 20
70 80 90 100 110 120
pF1KE5 RDPGAVDLEKVANVIVDHSLQDCVFSKEAGRMCYAIIQAESKQAGQSVFRRGLLNRLQQE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 -DPGAVDLEKVANVIVDHSLQDCVFSKEAGRMCYAIIQAESKQAGQSVFRRGLLNRLQQE
30 40 50 60 70 80
130 140 150 160 170 180
pF1KE5 YQAREQLRARSLQGWVCYVTFICNIFDYLRVNNMPMMALVNPVYDCLFRLAQPDSLSKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YQAREQLRARSLQGWVCYVTFICNIFDYLRVNNMPMMALVNPVYDCLFRLAQPDSLSKEE
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE5 EVDCLVLQLHRVGEQLEKMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEIIEFRAAGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVDCLVLQLHRVGEQLEKMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEIIEFRAAGW
150 160 170 180 190 200
250
pF1KE5 KTTPAAHKYYYSEVSD
::::::::::::::::
XP_016 KTTPAAHKYYYSEVSD
210 220
>>XP_005257589 (OMIM: 612072) PREDICTED: MIF4G domain-co (222 aa)
initn: 1306 init1: 1306 opt: 1306 Z-score: 1652.9 bits: 313.2 E(85289): 2.5e-85
Smith-Waterman score: 1391; 86.7% identity (86.7% similar) in 256 aa overlap (1-256:1-222)
10 20 30 40 50 60
pF1KE5 MGEPSREEYKIQSFDAETQQLLKTALKVACFETEDGEYSVCQRSYSNCSRLMPSRCNTQY
:::::::::::::::::::::::::::
XP_005 MGEPSREEYKIQSFDAETQQLLKTALK---------------------------------
10 20
70 80 90 100 110 120
pF1KE5 RDPGAVDLEKVANVIVDHSLQDCVFSKEAGRMCYAIIQAESKQAGQSVFRRGLLNRLQQE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 -DPGAVDLEKVANVIVDHSLQDCVFSKEAGRMCYAIIQAESKQAGQSVFRRGLLNRLQQE
30 40 50 60 70 80
130 140 150 160 170 180
pF1KE5 YQAREQLRARSLQGWVCYVTFICNIFDYLRVNNMPMMALVNPVYDCLFRLAQPDSLSKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YQAREQLRARSLQGWVCYVTFICNIFDYLRVNNMPMMALVNPVYDCLFRLAQPDSLSKEE
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE5 EVDCLVLQLHRVGEQLEKMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEIIEFRAAGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EVDCLVLQLHRVGEQLEKMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEIIEFRAAGW
150 160 170 180 190 200
250
pF1KE5 KTTPAAHKYYYSEVSD
::::::::::::::::
XP_005 KTTPAAHKYYYSEVSD
210 220
>>XP_005257590 (OMIM: 612072) PREDICTED: MIF4G domain-co (222 aa)
initn: 1306 init1: 1306 opt: 1306 Z-score: 1652.9 bits: 313.2 E(85289): 2.5e-85
Smith-Waterman score: 1391; 86.7% identity (86.7% similar) in 256 aa overlap (1-256:1-222)
10 20 30 40 50 60
pF1KE5 MGEPSREEYKIQSFDAETQQLLKTALKVACFETEDGEYSVCQRSYSNCSRLMPSRCNTQY
:::::::::::::::::::::::::::
XP_005 MGEPSREEYKIQSFDAETQQLLKTALK---------------------------------
10 20
70 80 90 100 110 120
pF1KE5 RDPGAVDLEKVANVIVDHSLQDCVFSKEAGRMCYAIIQAESKQAGQSVFRRGLLNRLQQE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 -DPGAVDLEKVANVIVDHSLQDCVFSKEAGRMCYAIIQAESKQAGQSVFRRGLLNRLQQE
30 40 50 60 70 80
130 140 150 160 170 180
pF1KE5 YQAREQLRARSLQGWVCYVTFICNIFDYLRVNNMPMMALVNPVYDCLFRLAQPDSLSKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YQAREQLRARSLQGWVCYVTFICNIFDYLRVNNMPMMALVNPVYDCLFRLAQPDSLSKEE
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE5 EVDCLVLQLHRVGEQLEKMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEIIEFRAAGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EVDCLVLQLHRVGEQLEKMNGQRMDELFVLIRDGFLLPTGLSSLAQLLLLEIIEFRAAGW
150 160 170 180 190 200
250
pF1KE5 KTTPAAHKYYYSEVSD
::::::::::::::::
XP_005 KTTPAAHKYYYSEVSD
210 220
256 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 22:38:56 2016 done: Mon Nov 7 22:38:57 2016
Total Scan time: 5.900 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]