Result of FASTA (omim) for
pFN21AE5214
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5214, 215 aa
1>>>pF1KE5214 215 - 215 aa - 215 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0652+/-0.000329; mu= 16.1811+/- 0.021
mean_var=93.5872+/-19.191, 0's: 0 Z-trim(117.2): 86 B-trim: 1470 in 1/53
Lambda= 0.132576
statistics sampled from 28874 (28983) to 28874 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.728), E-opt: 0.2 (0.34), width: 16
Scan time: 4.670
The best scores are: opt bits E(85289)
NP_004579 (OMIM: 601327,615378) sodium channel sub ( 215) 1466 290.0 2e-78
NP_005788 (OMIM: 604873) myelin protein zero-like ( 215) 324 71.6 1.1e-12
NP_658911 (OMIM: 604873) myelin protein zero-like ( 215) 324 71.6 1.1e-12
NP_777594 (OMIM: 608256,611819) sodium channel sub ( 228) 286 64.3 1.8e-10
XP_016856810 (OMIM: 118200,145900,159440,180800,60 ( 240) 255 58.4 1.1e-08
NP_000521 (OMIM: 118200,145900,159440,180800,60525 ( 248) 255 58.4 1.2e-08
NP_001302420 (OMIM: 118200,145900,159440,180800,60 ( 312) 255 58.5 1.4e-08
NP_078845 (OMIM: 604376) myelin protein zero-like ( 209) 250 57.4 2e-08
NP_003944 (OMIM: 604376) myelin protein zero-like ( 269) 251 57.7 2.1e-08
NP_938016 (OMIM: 611707) myelin protein zero-like ( 235) 226 52.9 5.3e-07
XP_006718838 (OMIM: 611707) PREDICTED: myelin prot ( 217) 209 49.6 4.8e-06
XP_016872793 (OMIM: 611707) PREDICTED: myelin prot ( 219) 209 49.6 4.8e-06
NP_001273081 (OMIM: 611707) myelin protein zero-li ( 223) 198 47.5 2.1e-05
NP_872413 (OMIM: 300620) V-set and immunoglobulin ( 387) 196 47.4 3.9e-05
NP_694938 (OMIM: 609770) junctional adhesion molec ( 384) 188 45.8 0.00011
XP_005271464 (OMIM: 609770) PREDICTED: junctional ( 384) 188 45.8 0.00011
NP_001091996 (OMIM: 609770) junctional adhesion mo ( 394) 188 45.8 0.00012
XP_016872702 (OMIM: 609770) PREDICTED: junctional ( 416) 188 45.9 0.00012
NP_001015887 (OMIM: 608351) immunoglobulin superfa ( 431) 188 45.9 0.00012
XP_011510776 (OMIM: 608351) PREDICTED: immunoglobu ( 323) 185 45.2 0.00015
XP_011510774 (OMIM: 608351) PREDICTED: immunoglobu ( 406) 185 45.3 0.00017
NP_001316849 (OMIM: 606011) V-set and immunoglobul ( 284) 183 44.7 0.00018
XP_011510773 (OMIM: 608351) PREDICTED: immunoglobu ( 429) 185 45.3 0.00018
NP_689751 (OMIM: 608351) immunoglobulin superfamil ( 430) 185 45.3 0.00018
XP_011510771 (OMIM: 608351) PREDICTED: immunoglobu ( 430) 185 45.3 0.00018
XP_011510772 (OMIM: 608351) PREDICTED: immunoglobu ( 430) 185 45.3 0.00018
XP_011510770 (OMIM: 608351) PREDICTED: immunoglobu ( 443) 185 45.3 0.00019
XP_011510769 (OMIM: 608351) PREDICTED: immunoglobu ( 453) 185 45.3 0.00019
XP_011510768 (OMIM: 608351) PREDICTED: immunoglobu ( 457) 185 45.3 0.00019
XP_011510765 (OMIM: 608351) PREDICTED: immunoglobu ( 480) 185 45.4 0.0002
XP_011510767 (OMIM: 608351) PREDICTED: immunoglobu ( 480) 185 45.4 0.0002
XP_011510766 (OMIM: 608351) PREDICTED: immunoglobu ( 480) 185 45.4 0.0002
XP_011510764 (OMIM: 608351) PREDICTED: immunoglobu ( 481) 185 45.4 0.0002
NP_055127 (OMIM: 606011) V-set and immunoglobulin ( 327) 183 44.8 0.0002
NP_001135821 (OMIM: 608256,611819) sodium channel ( 118) 176 43.0 0.00025
NP_001273500 (OMIM: 609770) junctional adhesion mo ( 355) 166 41.6 0.002
NP_001273499 (OMIM: 609770) junctional adhesion mo ( 355) 166 41.6 0.002
NP_060870 (OMIM: 608214,613120) sodium channel sub ( 215) 155 39.2 0.0061
XP_011541199 (OMIM: 608214,613120) PREDICTED: sodi ( 215) 155 39.2 0.0061
NP_001035241 (OMIM: 608214,613120) sodium channel ( 215) 155 39.2 0.0061
XP_011527778 (OMIM: 602621) PREDICTED: coxsackievi ( 348) 157 39.8 0.0065
NP_001193995 (OMIM: 602621) coxsackievirus and ade ( 352) 157 39.9 0.0065
NP_001329 (OMIM: 602621) coxsackievirus and adenov ( 365) 157 39.9 0.0067
NP_976031 (OMIM: 225060,600644) nectin-1 isoform 3 ( 352) 155 39.5 0.0085
>>NP_004579 (OMIM: 601327,615378) sodium channel subunit (215 aa)
initn: 1466 init1: 1466 opt: 1466 Z-score: 1529.0 bits: 290.0 E(85289): 2e-78
Smith-Waterman score: 1466; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KE5 MHRDAWLPRPAFSLTGLSLFFSLVPPGRSMEVTVPATLNVLNGSDARLPCTFNSCYTVNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MHRDAWLPRPAFSLTGLSLFFSLVPPGRSMEVTVPATLNVLNGSDARLPCTFNSCYTVNH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 KQFSLNWTYQECNNCSEEMFLQFRMKIINLKLERFQDRVEFSGNPSKYDVSVMLRNVQPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KQFSLNWTYQECNNCSEEMFLQFRMKIINLKLERFQDRVEFSGNPSKYDVSVMLRNVQPE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 DEGIYNCYIMNPPDRHRGHGKIHLQVLMEEPPERDSTVAVIVGASVGGFLAVVILVLMVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 DEGIYNCYIMNPPDRHRGHGKIHLQVLMEEPPERDSTVAVIVGASVGGFLAVVILVLMVV
130 140 150 160 170 180
190 200 210
pF1KE5 KCVRRKKEQKLSTDDLKTEEEGKTDGEGNPDDGAK
:::::::::::::::::::::::::::::::::::
NP_004 KCVRRKKEQKLSTDDLKTEEEGKTDGEGNPDDGAK
190 200 210
>>NP_005788 (OMIM: 604873) myelin protein zero-like prot (215 aa)
initn: 261 init1: 202 opt: 324 Z-score: 348.5 bits: 71.6 E(85289): 1.1e-12
Smith-Waterman score: 324; 27.9% identity (66.7% similar) in 201 aa overlap (9-207:8-204)
10 20 30 40 50 60
pF1KE5 MHRDAWLPRPAFSLTGLSLFFSLVPPGRSMEVTVPATLNVLNGSDARLPCTFNSCYTVNH
: .. : :..: . . : ..:. . .:...::.:::: :::.: :.
NP_005 MYGKSSTRAVLLLLGIQL--TALWPIAAVEIYTSRVLEAVNGTDARLKCTFSSFAPVGD
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 KQFSLNWTYQECNNCSEEMFLQFRMKIINLKLERFQDRVEFSGNPSKYDVSVMLRNVQPE
....:... .. :.. . ... .. ::.::: ..::: .::.:..: ..: .
NP_005 A-LTVTWNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDGNPERYDASILLWKLQFD
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE5 DEGIYNCYIMNPPDRHRGHGKIHLQVLMEEPPERDSTVAVIVGASVGGFLAVVILVLMVV
:.: :.: . :::: :.:.:.:. . .:. .: :. ... ....:...
NP_005 DNGTYTCQVKNPPDVDGVIGEIRLSVVHTVRFSEIHFLALAIG-SACALMIIIVIVVVLF
120 130 140 150 160 170
190 200 210
pF1KE5 KCVRRKK--EQKLSTDDLKTEEEGKTDGEGNPDDGAK
. :.:. :. .. ..:..:: . . :
NP_005 QHYRKKRWAERAHKVVEIKSKEEERLNQEKKVSVYLEDTD
180 190 200 210
>>NP_658911 (OMIM: 604873) myelin protein zero-like prot (215 aa)
initn: 261 init1: 202 opt: 324 Z-score: 348.5 bits: 71.6 E(85289): 1.1e-12
Smith-Waterman score: 324; 27.9% identity (66.7% similar) in 201 aa overlap (9-207:8-204)
10 20 30 40 50 60
pF1KE5 MHRDAWLPRPAFSLTGLSLFFSLVPPGRSMEVTVPATLNVLNGSDARLPCTFNSCYTVNH
: .. : :..: . . : ..:. . .:...::.:::: :::.: :.
NP_658 MYGKSSTRAVLLLLGIQL--TALWPIAAVEIYTSRVLEAVNGTDARLKCTFSSFAPVGD
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 KQFSLNWTYQECNNCSEEMFLQFRMKIINLKLERFQDRVEFSGNPSKYDVSVMLRNVQPE
....:... .. :.. . ... .. ::.::: ..::: .::.:..: ..: .
NP_658 A-LTVTWNFRPLDGGPEQFVFYYHIDPFQPMSGRFKDRVSWDGNPERYDASILLWKLQFD
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE5 DEGIYNCYIMNPPDRHRGHGKIHLQVLMEEPPERDSTVAVIVGASVGGFLAVVILVLMVV
:.: :.: . :::: :.:.:.:. . .:. .: :. ... ....:...
NP_658 DNGTYTCQVKNPPDVDGVIGEIRLSVVHTVRFSEIHFLALAIG-SACALMIIIVIVVVLF
120 130 140 150 160 170
190 200 210
pF1KE5 KCVRRKK--EQKLSTDDLKTEEEGKTDGEGNPDDGAK
. :.:. :. .. ..:..:: . . :
NP_658 QHYRKKRWAERAHKVVEIKSKEEERLNQEKKVSVYLEDTD
180 190 200 210
>>NP_777594 (OMIM: 608256,611819) sodium channel subunit (228 aa)
initn: 212 init1: 145 opt: 286 Z-score: 308.9 bits: 64.3 E(85289): 1.8e-10
Smith-Waterman score: 286; 31.6% identity (62.8% similar) in 196 aa overlap (10-190:11-198)
10 20 30 40 50
pF1KE5 MHRDAWLPRPAFSL-TGLSLFFSLVPPGRSMEVTVPATLNV--LNGSDARLPCTFNSCY
:: : ::: .: :.: :.::.: . .. .::.. :::::.::.
NP_777 MPGAGDGGKAPARWLGTGLLGLF-LLPVTLSLEVSVGKATDIYAVNGTEILLPCTFSSCF
10 20 30 40 50
60 70 80 90 100
pF1KE5 TVNHKQFSLNWTYQECNNCSEEMFLQFRMKIINLKLE-----RFQDRVEFSGNPSKY--D
. .: ::: : :. . . .. . : : . . .::. . :. .. .
NP_777 GFEDLHF--RWTY----NSSDAFKILIEGTVKNEKSDPKVTLKDDDRITLVGSTKEKMNN
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE5 VSVMLRNVQPEDEGIYNCYIMNPPDRH-RGHGKIHLQVLMEEPPERDSTVAVIVGASVGG
.:..::... : : :.:.. :: . . . :. : :::. .. : :.::..:. : :::
NP_777 ISIVLRDLEFSDTGKYTCHVKNPKENNLQHHATIFLQVV-DRLEEVDNTVTLIILAVVGG
120 130 140 150 160 170
170 180 190 200 210
pF1KE5 FLAVVILVLMVVKCV----RRKKEQKLSTDDLKTEEEGKTDGEGNPDDGAK
....::.:.. : . .. .:.:
NP_777 VIGLLILILLIKKLIIFILKKTREKKKECLVSSSGNDNTENGLPGSKAEEKPPSKV
180 190 200 210 220
>>XP_016856810 (OMIM: 118200,145900,159440,180800,605253 (240 aa)
initn: 174 init1: 86 opt: 255 Z-score: 276.6 bits: 58.4 E(85289): 1.1e-08
Smith-Waterman score: 255; 28.8% identity (58.0% similar) in 212 aa overlap (8-215:20-221)
10 20 30 40
pF1KE5 MHRDAWLPRPAFSLTGLSLFFSLV-PPGRSMEVTVPATLNVLNGSDAR
: : ... :: ::: :.... : . .. :: .
XP_016 MLRAPAPAPAMAPGAPSSSPSPILAVL---LFSSLVLSPAQAIVVYTDREVHGAVGSRVT
10 20 30 40 50
50 60 70 80 90 100
pF1KE5 LPCTFNSCYTVNHKQFSLNWTYQ-ECNNCSEEMFLQFRMKIINLKLERFQDRVEFSGNPS
: :.: : :. ..:..: :: : . . .: . . .. :..:... :.:
XP_016 LHCSFWSSEWVSD-DISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPR
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE5 KYDVSVMLRNVQPEDEGIYNCYIMNPPDRHRGHGKIHLQVLMEEPPERDSTVAVIVGASV
: :....:.. :.: ..: . :::: ... : :. :. : : .:..:: .
XP_016 WKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVF-EKVPTR---YGVVLGAVI
120 130 140 150 160 170
170 180 190 200 210
pF1KE5 GGFLAVVILVLMVVKCVRRK--KEQKLSTDDLKTEEEGKTDGEGNPDDGAK
:: :.::.:.:.. :: ..: :.. :.:: :. :..:
XP_016 GGVLGVVLLLLLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGK--DASKRGRQGFYNN
180 190 200 210 220 230
XP_016 QMRSCVWKTL
240
>>NP_000521 (OMIM: 118200,145900,159440,180800,605253,60 (248 aa)
initn: 174 init1: 86 opt: 255 Z-score: 276.4 bits: 58.4 E(85289): 1.2e-08
Smith-Waterman score: 255; 28.8% identity (58.0% similar) in 212 aa overlap (8-215:10-211)
10 20 30 40 50
pF1KE5 MHRDAWLPRPAFSLTGLSLFFSLV-PPGRSMEVTVPATLNVLNGSDARLPCTFNSCYT
: : ... :: ::: :.... : . .. :: . : :.: :
NP_000 MAPGAPSSSPSPILAVL---LFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHCSFWSSEW
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 VNHKQFSLNWTYQ-ECNNCSEEMFLQFRMKIINLKLERFQDRVEFSGNPSKYDVSVMLRN
:. ..:..: :: : . . .: . . .. :..:... :.: : :....:
NP_000 VSD-DISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDGSIVIHN
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 VQPEDEGIYNCYIMNPPDRHRGHGKIHLQVLMEEPPERDSTVAVIVGASVGGFLAVVILV
.. :.: ..: . :::: ... : :. :. : : .:..:: .:: :.::.:.
NP_000 LDYSDNGTFTCDVKNPPDIVGKTSQVTLYVF-EKVPTR---YGVVLGAVIGGVLGVVLLL
120 130 140 150 160 170
180 190 200 210
pF1KE5 LMVVKCVRRK--KEQKLSTDDLKTEEEGKTDGEGNPDDGAK
:.. :: ..: :.. :.:: :. :..:
NP_000 LLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGK--DASKRGRQTPVLYAMLDHSRSTK
180 190 200 210 220 230
NP_000 AVSEKKAKGLGESRKDKK
240
>>NP_001302420 (OMIM: 118200,145900,159440,180800,605253 (312 aa)
initn: 174 init1: 86 opt: 255 Z-score: 275.2 bits: 58.5 E(85289): 1.4e-08
Smith-Waterman score: 255; 28.8% identity (58.0% similar) in 212 aa overlap (8-215:10-211)
10 20 30 40 50
pF1KE5 MHRDAWLPRPAFSLTGLSLFFSLV-PPGRSMEVTVPATLNVLNGSDARLPCTFNSCYT
: : ... :: ::: :.... : . .. :: . : :.: :
NP_001 MAPGAPSSSPSPILAVL---LFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHCSFWSSEW
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 VNHKQFSLNWTYQ-ECNNCSEEMFLQFRMKIINLKLERFQDRVEFSGNPSKYDVSVMLRN
:. ..:..: :: : . . .: . . .. :..:... :.: : :....:
NP_001 VSD-DISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDGSIVIHN
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 VQPEDEGIYNCYIMNPPDRHRGHGKIHLQVLMEEPPERDSTVAVIVGASVGGFLAVVILV
.. :.: ..: . :::: ... : :. :. : : .:..:: .:: :.::.:.
NP_001 LDYSDNGTFTCDVKNPPDIVGKTSQVTLYVF-EKVPTR---YGVVLGAVIGGVLGVVLLL
120 130 140 150 160 170
180 190 200 210
pF1KE5 LMVVKCVRRK--KEQKLSTDDLKTEEEGKTDGEGNPDDGAK
:.. :: ..: :.. :.:: :. :..:
NP_001 LLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGK--DASKRGRQTPVLYAMLDHSRSTK
180 190 200 210 220 230
NP_001 AVSEKKAKGLGESRKDKKXRLAGRAGDRGLGVESAKGPKVMVIEMELRKDEQSPELRPAV
240 250 260 270 280 290
>>NP_078845 (OMIM: 604376) myelin protein zero-like prot (209 aa)
initn: 143 init1: 72 opt: 250 Z-score: 272.1 bits: 57.4 E(85289): 2e-08
Smith-Waterman score: 250; 29.4% identity (61.6% similar) in 177 aa overlap (17-190:24-197)
10 20 30 40 50
pF1KE5 MHRDAWLPRPAFSLTGLSLFFSLVPPGRS-MEVTVPATLNVLNGSDARLPCTF
:. ..:. : : .:: .: . : ::....: : :
NP_078 MAASAGAGAVIAAPDSRRWLWSVLAAALGLLTAGVSALEVYTPKEIFVANGTQGKLTCKF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 NSCYTVNHKQFSLNWTYQECNNCSEEMFLQFRMKIINL-KLERFQDRVEFSGNPSKYDVS
.: :.. :..:..: . . :... . . : . :.::. ..:. .: :.:
NP_078 KSTSTTGG-LTSVSWSFQPEGADTTVSFFHYSQGQVYLGNYPPFKDRISWAGDLDKKDAS
70 80 90 100 110
120 130 140 150 160 170
pF1KE5 VMLRNVQPEDEGIYNCYIMNPPDRHRGHGKIHLQVLMEEP-PERDSTVAVIVGASVGGFL
. ..:.: .: : : . :::: :.:.: :. .: : : :.:: .. :
NP_078 INIENMQFIHNGTYICDVKNPPDIVVQPGHIRLYVVEKENLPVFP--VWVVVGIVTAVVL
120 130 140 150 160 170
180 190 200 210
pF1KE5 AVVILVLMVVKCVRRKKEQKLSTDDLKTEEEGKTDGEGNPDDGAK
....:. :.. . :.:..:
NP_078 GLTLLISMILAVLYRRKNSKRDYTGAQSYMHS
180 190 200
>>NP_003944 (OMIM: 604376) myelin protein zero-like prot (269 aa)
initn: 127 init1: 72 opt: 251 Z-score: 271.9 bits: 57.7 E(85289): 2.1e-08
Smith-Waterman score: 251; 28.9% identity (60.4% similar) in 187 aa overlap (17-200:24-207)
10 20 30 40 50
pF1KE5 MHRDAWLPRPAFSLTGLSLFFSLVPPGRS-MEVTVPATLNVLNGSDARLPCTF
:. ..:. : : .:: .: . : ::....: : :
NP_003 MAASAGAGAVIAAPDSRRWLWSVLAAALGLLTAGVSALEVYTPKEIFVANGTQGKLTCKF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 NSCYTVNHKQFSLNWTYQECNNCSEEMFLQFRMKIINL-KLERFQDRVEFSGNPSKYDVS
.: :.. :..:..: . . :... . . : . :.::. ..:. .: :.:
NP_003 KSTSTTGGLT-SVSWSFQPEGADTTVSFFHYSQGQVYLGNYPPFKDRISWAGDLDKKDAS
70 80 90 100 110
120 130 140 150 160 170
pF1KE5 VMLRNVQPEDEGIYNCYIMNPPDRHRGHGKIHLQVLMEEP-PERDSTVAVIVGASVGGFL
. ..:.: .: : : . :::: :.:.: :. .: : : :.:: .. :
NP_003 INIENMQFIHNGTYICDVKNPPDIVVQPGHIRLYVVEKENLPVF--PVWVVVGIVTAVVL
120 130 140 150 160 170
180 190 200 210
pF1KE5 AVVILVLMVVKCVRRKKEQKLSTDDLKTEEEGKTDGEGNPDDGAK
....:. :.. . :.:..: . .: :
NP_003 GLTLLISMILAVLYRRKNSKRDYTGCSTSESLSPVKQAPRKSPSDTEGLVKSLPSGSHQG
180 190 200 210 220 230
>>NP_938016 (OMIM: 611707) myelin protein zero-like prot (235 aa)
initn: 223 init1: 146 opt: 226 Z-score: 246.7 bits: 52.9 E(85289): 5.3e-07
Smith-Waterman score: 226; 27.4% identity (54.7% similar) in 201 aa overlap (12-207:15-210)
10 20 30 40 50
pF1KE5 MHRDAWLPRPAFSLTGLSLFFSLVPPGRSMEVTVPATLNVLNGSDARLPCTFNSCYT
: : :. :::. : :.:. . : . : .: :::.:
NP_938 MQQRGAAGSRGCALFPLLGV-LFFQGVYIVFSLEIRADAHVRGYVGEKIKLKCTFKSTSD
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 VNHKQFSLNWTYQECNNCSEEMFLQFRMKIINLKLERFQDRVEFSGNPSKYDVSVMLRNV
:. : ....:::. .. ..... :.::. . :: : :.:. . :
NP_938 VTDK-LTIDWTYRPPSSSHTVSIFHYQSFQYPTTAGTFRDRISWVGNVYKGDASISISNP
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE5 QPEDEGIYNCYIMNPPDRHRGHGKIHLQVLMEEPPERDSTVAVIVGASVGGFL-AVVILV
.:.: ..: . :::: :.. .: : . :.::.. :. :. ..:...
NP_938 TIKDNGTFSCAVKNPPDVHHNIPMTELTVTERGFGTMLSSVALL---SILVFVPSAVVVA
120 130 140 150 160 170
180 190 200 210
pF1KE5 LMVVKCVRR----KKEQKLSTDDLKTEEEGKTDGEGNPDDGAK
:..:. :. ::... . . : :: :
NP_938 LLLVRMGRKAAGLKKRSRSGYKKSSIEVSDDTDQEEEEACMARLCVRCAECLDSDYEETY
180 190 200 210 220 230
215 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 22:34:26 2016 done: Mon Nov 7 22:34:27 2016
Total Scan time: 4.670 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]