Result of FASTA (omim) for
pFN21AE5189
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5189, 147 aa
1>>>pF1KE5189 147 - 147 aa - 147 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1660+/-0.000315; mu= 12.5498+/- 0.019
mean_var=64.0996+/-13.084, 0's: 0 Z-trim(117.3): 40 B-trim: 1152 in 2/55
Lambda= 0.160194
statistics sampled from 29226 (29270) to 29226 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.742), E-opt: 0.2 (0.343), width: 16
Scan time: 4.290
The best scores are: opt bits E(85289)
NP_001165099 (OMIM: 192240,603933) vascular endoth ( 147) 1079 257.3 6.5e-69
NP_001020541 (OMIM: 192240,603933) vascular endoth ( 327) 1079 257.5 1.3e-68
NP_001191313 (OMIM: 192240,603933) vascular endoth ( 171) 1028 245.5 2.6e-65
NP_001165096 (OMIM: 192240,603933) vascular endoth ( 209) 1028 245.6 3.1e-65
NP_001165095 (OMIM: 192240,603933) vascular endoth ( 215) 1028 245.6 3.2e-65
NP_001165094 (OMIM: 192240,603933) vascular endoth ( 232) 1028 245.6 3.4e-65
NP_001165098 (OMIM: 192240,603933) vascular endoth ( 174) 1025 244.8 4.3e-65
NP_001165100 (OMIM: 192240,603933) vascular endoth ( 191) 1025 244.9 4.6e-65
NP_001165097 (OMIM: 192240,603933) vascular endoth ( 191) 1025 244.9 4.6e-65
NP_001191314 (OMIM: 192240,603933) vascular endoth ( 351) 1028 245.7 4.7e-65
NP_001303939 (OMIM: 192240,603933) vascular endoth ( 213) 1025 244.9 5.1e-65
NP_001020538 (OMIM: 192240,603933) vascular endoth ( 389) 1028 245.7 5.2e-65
NP_003367 (OMIM: 192240,603933) vascular endotheli ( 395) 1028 245.7 5.2e-65
NP_001020537 (OMIM: 192240,603933) vascular endoth ( 412) 1028 245.8 5.4e-65
NP_001020540 (OMIM: 192240,603933) vascular endoth ( 354) 1025 245.0 7.7e-65
NP_001028928 (OMIM: 192240,603933) vascular endoth ( 371) 1025 245.0 8e-65
NP_001020539 (OMIM: 192240,603933) vascular endoth ( 371) 1025 245.0 8e-65
NP_001165101 (OMIM: 192240,603933) vascular endoth ( 137) 967 231.4 3.8e-61
NP_001165093 (OMIM: 192240,603933) vascular endoth ( 317) 967 231.6 7.6e-61
NP_001273973 (OMIM: 192240,603933) vascular endoth ( 163) 822 197.9 5.4e-51
NP_001193941 (OMIM: 601121) placenta growth factor ( 149) 456 113.3 1.5e-25
NP_002623 (OMIM: 601121) placenta growth factor is ( 170) 437 108.9 3.4e-24
NP_001280572 (OMIM: 601121) placenta growth factor ( 169) 436 108.7 4e-24
NP_001230662 (OMIM: 601398) vascular endothelial g ( 188) 373 94.2 1e-19
NP_003368 (OMIM: 601398) vascular endothelial grow ( 207) 364 92.1 4.8e-19
NP_005420 (OMIM: 601528,615907) vascular endotheli ( 419) 265 69.4 6.6e-12
NP_004460 (OMIM: 300091) vascular endothelial grow ( 354) 234 62.2 8.3e-10
XP_011513721 (OMIM: 173430) PREDICTED: platelet-de ( 210) 145 41.5 0.00084
NP_002598 (OMIM: 173430) platelet-derived growth f ( 211) 145 41.5 0.00084
XP_016867778 (OMIM: 173430) PREDICTED: platelet-de ( 224) 145 41.5 0.00088
XP_011513718 (OMIM: 173430) PREDICTED: platelet-de ( 249) 145 41.6 0.00096
XP_011513717 (OMIM: 173430) PREDICTED: platelet-de ( 256) 145 41.6 0.00099
NP_148937 (OMIM: 190040,213600,607174,607907,61548 ( 226) 142 40.8 0.0014
NP_002599 (OMIM: 190040,213600,607174,607907,61548 ( 241) 142 40.9 0.0015
NP_148983 (OMIM: 173430) platelet-derived growth f ( 196) 136 39.4 0.0033
XP_011513720 (OMIM: 173430) PREDICTED: platelet-de ( 234) 136 39.5 0.0039
XP_011513719 (OMIM: 173430) PREDICTED: platelet-de ( 241) 136 39.5 0.004
>>NP_001165099 (OMIM: 192240,603933) vascular endothelia (147 aa)
initn: 1079 init1: 1079 opt: 1079 Z-score: 1358.2 bits: 257.3 E(85289): 6.5e-69
Smith-Waterman score: 1079; 100.0% identity (100.0% similar) in 147 aa overlap (1-147:1-147)
10 20 30 40 50 60
pF1KE5 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
70 80 90 100 110 120
130 140
pF1KE5 SFLQHNKCECRPKKDRARQEKCDKPRR
:::::::::::::::::::::::::::
NP_001 SFLQHNKCECRPKKDRARQEKCDKPRR
130 140
>>NP_001020541 (OMIM: 192240,603933) vascular endothelia (327 aa)
initn: 1079 init1: 1079 opt: 1079 Z-score: 1353.0 bits: 257.5 E(85289): 1.3e-68
Smith-Waterman score: 1079; 100.0% identity (100.0% similar) in 147 aa overlap (1-147:181-327)
10 20 30
pF1KE5 MNFLLSWVHWSLALLLYLHHAKWSQAAPMA
::::::::::::::::::::::::::::::
NP_001 RRGAEESGPPHSPSRRGSASRAGPGRASETMNFLLSWVHWSLALLLYLHHAKWSQAAPMA
160 170 180 190 200 210
40 50 60 70 80 90
pF1KE5 EGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDE
220 230 240 250 260 270
100 110 120 130 140
pF1KE5 GLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKKDRARQEKCDKPRR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKKDRARQEKCDKPRR
280 290 300 310 320
>>NP_001191313 (OMIM: 192240,603933) vascular endothelia (171 aa)
initn: 1065 init1: 1028 opt: 1028 Z-score: 1293.5 bits: 245.5 E(85289): 2.6e-65
Smith-Waterman score: 1028; 100.0% identity (100.0% similar) in 141 aa overlap (1-141:1-141)
10 20 30 40 50 60
pF1KE5 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
70 80 90 100 110 120
130 140
pF1KE5 SFLQHNKCECRPKKDRARQEKCDKPRR
:::::::::::::::::::::
NP_001 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRYKSWSVCDKPRR
130 140 150 160 170
>>NP_001165096 (OMIM: 192240,603933) vascular endothelia (209 aa)
initn: 1028 init1: 1028 opt: 1028 Z-score: 1292.2 bits: 245.6 E(85289): 3.1e-65
Smith-Waterman score: 1028; 100.0% identity (100.0% similar) in 141 aa overlap (1-141:1-141)
10 20 30 40 50 60
pF1KE5 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
70 80 90 100 110 120
130 140
pF1KE5 SFLQHNKCECRPKKDRARQEKCDKPRR
:::::::::::::::::::::
NP_001 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRPCGPCSERRKHLFVQDPQTCK
130 140 150 160 170 180
>>NP_001165095 (OMIM: 192240,603933) vascular endothelia (215 aa)
initn: 1028 init1: 1028 opt: 1028 Z-score: 1292.0 bits: 245.6 E(85289): 3.2e-65
Smith-Waterman score: 1028; 100.0% identity (100.0% similar) in 141 aa overlap (1-141:1-141)
10 20 30 40 50 60
pF1KE5 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
70 80 90 100 110 120
130 140
pF1KE5 SFLQHNKCECRPKKDRARQEKCDKPRR
:::::::::::::::::::::
NP_001 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRYKSWSVPCGPCSERRKHLFVQ
130 140 150 160 170 180
>>NP_001165094 (OMIM: 192240,603933) vascular endothelia (232 aa)
initn: 1028 init1: 1028 opt: 1028 Z-score: 1291.5 bits: 245.6 E(85289): 3.4e-65
Smith-Waterman score: 1028; 100.0% identity (100.0% similar) in 141 aa overlap (1-141:1-141)
10 20 30 40 50 60
pF1KE5 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
70 80 90 100 110 120
130 140
pF1KE5 SFLQHNKCECRPKKDRARQEKCDKPRR
:::::::::::::::::::::
NP_001 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRYKSWSVYVGARCCLMPWSLPG
130 140 150 160 170 180
>>NP_001165098 (OMIM: 192240,603933) vascular endothelia (174 aa)
initn: 1022 init1: 1022 opt: 1025 Z-score: 1289.6 bits: 244.8 E(85289): 4.3e-65
Smith-Waterman score: 1025; 94.0% identity (96.7% similar) in 151 aa overlap (1-147:1-151)
10 20 30 40 50 60
pF1KE5 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
70 80 90 100 110 120
130 140
pF1KE5 SFLQHNKCECRPKKDRARQEK----CDKPRR
::::::::::::::::::::. :.. :.
NP_001 SFLQHNKCECRPKKDRARQENPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKM
130 140 150 160 170
>>NP_001165100 (OMIM: 192240,603933) vascular endothelia (191 aa)
initn: 1022 init1: 1022 opt: 1025 Z-score: 1289.0 bits: 244.9 E(85289): 4.6e-65
Smith-Waterman score: 1025; 94.0% identity (96.7% similar) in 151 aa overlap (1-147:1-151)
10 20 30 40 50 60
pF1KE5 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
70 80 90 100 110 120
130 140
pF1KE5 SFLQHNKCECRPKKDRARQEK----CDKPRR
::::::::::::::::::::. :.. :.
NP_001 SFLQHNKCECRPKKDRARQENPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELN
130 140 150 160 170 180
NP_001 ERTCRSLTRKD
190
>>NP_001165097 (OMIM: 192240,603933) vascular endothelia (191 aa)
initn: 1022 init1: 1022 opt: 1025 Z-score: 1289.0 bits: 244.9 E(85289): 4.6e-65
Smith-Waterman score: 1025; 94.0% identity (96.7% similar) in 151 aa overlap (1-147:1-151)
10 20 30 40 50 60
pF1KE5 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
70 80 90 100 110 120
130 140
pF1KE5 SFLQHNKCECRPKKDRARQEK----CDKPRR
::::::::::::::::::::. :.. :.
NP_001 SFLQHNKCECRPKKDRARQENPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELN
130 140 150 160 170 180
NP_001 ERTCRCDKPRR
190
>>NP_001191314 (OMIM: 192240,603933) vascular endothelia (351 aa)
initn: 1065 init1: 1028 opt: 1028 Z-score: 1288.8 bits: 245.7 E(85289): 4.7e-65
Smith-Waterman score: 1028; 100.0% identity (100.0% similar) in 141 aa overlap (1-141:181-321)
10 20 30
pF1KE5 MNFLLSWVHWSLALLLYLHHAKWSQAAPMA
::::::::::::::::::::::::::::::
NP_001 RRGAEESGPPHSPSRRGSASRAGPGRASETMNFLLSWVHWSLALLLYLHHAKWSQAAPMA
160 170 180 190 200 210
40 50 60 70 80 90
pF1KE5 EGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDE
220 230 240 250 260 270
100 110 120 130 140
pF1KE5 GLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKKDRARQEKCDKPRR
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKKDRARQEKKSVRGKGKG
280 290 300 310 320 330
NP_001 QKRKRKKSRYKSWSVCDKPRR
340 350
147 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 22:25:29 2016 done: Mon Nov 7 22:25:30 2016
Total Scan time: 4.290 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]