Result of FASTA (ccds) for
pFN21AE5164
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5164, 147 aa
1>>>pF1KE5164 147 - 147 aa - 147 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9873+/-0.00067; mu= 13.2851+/- 0.040
mean_var=61.4057+/-12.309, 0's: 0 Z-trim(109.4): 18 B-trim: 4 in 1/50
Lambda= 0.163670
statistics sampled from 10883 (10897) to 10883 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.716), E-opt: 0.2 (0.335), width: 16
Scan time: 1.690
The best scores are: opt bits E(32554)
CCDS9555.1 RNASE4 gene_id:6038|Hs108|chr14 ( 147) 1029 250.8 2.3e-67
CCDS9559.1 RNASE1 gene_id:6035|Hs108|chr14 ( 156) 493 124.2 3e-29
CCDS9554.1 ANG gene_id:283|Hs108|chr14 ( 147) 343 88.8 1.3e-18
CCDS9558.1 RNASE6 gene_id:6039|Hs108|chr14 ( 150) 284 74.9 2.1e-14
CCDS41914.1 RNASE7 gene_id:84659|Hs108|chr14 ( 156) 280 73.9 4.2e-14
CCDS9567.1 RNASE8 gene_id:122665|Hs108|chr14 ( 154) 252 67.3 4e-12
>>CCDS9555.1 RNASE4 gene_id:6038|Hs108|chr14 (147 aa)
initn: 1029 init1: 1029 opt: 1029 Z-score: 1323.0 bits: 250.8 E(32554): 2.3e-67
Smith-Waterman score: 1029; 100.0% identity (100.0% similar) in 147 aa overlap (1-147:1-147)
10 20 30 40 50 60
pF1KE5 MALQRTHSLLLLLLLTLLGLGLVQPSYGQDGMYQRFLRQHVHPEETGGSDRYCNLMMQRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 MALQRTHSLLLLLLLTLLGLGLVQPSYGQDGMYQRFLRQHVHPEETGGSDRYCNLMMQRR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 KMTLYHCKRFNTFIHEDIWNIRSICSTTNIQCKNGKMNCHEGVVKVTDCRDTGSSRAPNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 KMTLYHCKRFNTFIHEDIWNIRSICSTTNIQCKNGKMNCHEGVVKVTDCRDTGSSRAPNC
70 80 90 100 110 120
130 140
pF1KE5 RYRAIASTRRVVIACEGNPQVPVHFDG
:::::::::::::::::::::::::::
CCDS95 RYRAIASTRRVVIACEGNPQVPVHFDG
130 140
>>CCDS9559.1 RNASE1 gene_id:6035|Hs108|chr14 (156 aa)
initn: 535 init1: 198 opt: 493 Z-score: 638.6 bits: 124.2 E(32554): 3e-29
Smith-Waterman score: 493; 46.3% identity (75.2% similar) in 149 aa overlap (1-146:1-149)
10 20 30 40 50
pF1KE5 MALQRTHSLLLLLLLTLLGLGLVQPSYGQDGMYQRFLRQHVHPEET-GGSDRYCNLMMQR
:::... ::::.: :: :: :::: :... ..: :::. . . ..:. ::: ::.:
CCDS95 MALEKSLVRLLLLVLILLVLGWVQPSLGKESRAKKFQRQHMDSDSSPSSSSTYCNQMMRR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 RKMTLYHCKRFNTFIHEDIWNIRSICSTTNIQCKNGKMNCHEG--VVKVTDCRDTGSSRA
:.:: .:: :::.:: . .....: .. ::::. ::... ...:::: :..::
CCDS95 RNMTQGRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQGNCYKSNSSMHITDCRLTNGSRY
70 80 90 100 110 120
120 130 140
pF1KE5 PNCRYRAIASTRRVVIACEGNPQVPVHFDG
::: ::. . :....::::.: ::::::
CCDS95 PNCAYRTSPKERHIIVACEGSPYVPVHFDASVEDST
130 140 150
>>CCDS9554.1 ANG gene_id:283|Hs108|chr14 (147 aa)
initn: 270 init1: 250 opt: 343 Z-score: 447.5 bits: 88.8 E(32554): 1.3e-18
Smith-Waterman score: 343; 41.7% identity (67.6% similar) in 139 aa overlap (9-146:5-140)
10 20 30 40 50
pF1KE5 MALQRTHSLLLLLLLTLLGLGLVQPSYGQDGM-YQRFLRQHVHPEETGGSDRYCNLMMQR
: .:::. .:::::. :. .::. : .:: :: . : .::::. .:.:
CCDS95 MVMGLGVLLLVFVLGLGLTPPTLAQDNSRYTHFLTQHYDAKPQGRDDRYCESIMRR
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 RKMTLYHCKRFNTFIHEDIWNIRSICSTTNIQCKNGKMNCHEGVVKVTDCRDTGSSRAPN
: .: :: .::::: . .:..:: . : . . .. .. .:: :. :.: :
CCDS95 RGLT-SPCKDINTFIHGNKRSIKAICENKNGNPHRENLRISKSSFQVTTCKLHGGSPWPP
60 70 80 90 100 110
120 130 140
pF1KE5 CRYRAIASTRRVVIACEGNPQVPVHFDG
:.::: :. : ::.:::.. .:::.:
CCDS95 CQYRATAGFRNVVVACENG--LPVHLDQSIFRRP
120 130 140
>>CCDS9558.1 RNASE6 gene_id:6039|Hs108|chr14 (150 aa)
initn: 305 init1: 153 opt: 284 Z-score: 372.1 bits: 74.9 E(32554): 2.1e-14
Smith-Waterman score: 284; 36.5% identity (58.1% similar) in 148 aa overlap (12-146:7-147)
10 20 30 40 50
pF1KE5 MALQRTHSLLLLLLLTLLGLGLVQPSYGQDGMYQR---FLRQHVHPEETGGSDRYCNLMM
:::: :. : : : .. . : ::..: : :: :
CCDS95 MVLCFPLLLLLLVLWGPVCPLHAWPKRLTKAHWFEIQHIQP-----SPLQCNRAM
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 QRRKMTLYHCKRFNTFIHEDIWNIRSICSTTNIQCKNGKMNCHEGV--VKVTDCRDTGSS
. . :::. :::.:... :. ..:. .: ::: . :::.. :..:::: : :.
CCDS95 SGINNYTQHCKHQNTFLHDSFQNVAAVCDLLSIVCKNRRHNCHQSSKPVNMTDCRLT-SG
60 70 80 90 100
120 130 140
pF1KE5 RAPNCRYRAIASTRRVVIACEGNPQ--------VPVHFDG
. :.::: : :. . ..::. :: ::::.:
CCDS95 KYPQCRYSAAAQYKFFIVACDP-PQKSDPPYKLVPVHLDSIL
110 120 130 140 150
>>CCDS41914.1 RNASE7 gene_id:84659|Hs108|chr14 (156 aa)
initn: 264 init1: 154 opt: 280 Z-score: 366.8 bits: 73.9 E(32554): 4.2e-14
Smith-Waterman score: 291; 39.3% identity (60.0% similar) in 150 aa overlap (12-146:11-153)
10 20 30 40 50
pF1KE5 MALQRTHSLLLLLLLTLLGLGLVQ-P-SYGQDGMY--QRFLRQHVHPEETGGSDRYCNLM
:::: :::: ... : : :: : : ::..: : . ::
CCDS41 MAPARAGFCPLLLLLLLGLWVAEIPVSAKPKGMTSSQWFKIQHMQP-----SPQACNSA
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 MQRRKMTLYHCKRFNTFIHEDIWNIRSICSTTNIQCKNGKMNCHE--GVVKVTDCRDTGS
:. . .:: .:::.:: . .. . :.: .: :::: :::. :.:..: :. : :
CCDS41 MKNINKHTKRCKDLNTFLHEPFSSVAATCQTPKIACKNGDKNCHQSHGAVSLTMCKLT-S
60 70 80 90 100 110
120 130 140
pF1KE5 SRAPNCRYRAIASTRRVVIACEGNPQ---------VPVHFDG
.. :::::. ... :.::. :: ::::.:
CCDS41 GKHPNCRYKEKRQNKSYVVACKP-PQKKDSQQFHLVPVHLDRVL
120 130 140 150
>>CCDS9567.1 RNASE8 gene_id:122665|Hs108|chr14 (154 aa)
initn: 250 init1: 142 opt: 252 Z-score: 331.1 bits: 67.3 E(32554): 4e-12
Smith-Waterman score: 252; 35.4% identity (55.8% similar) in 147 aa overlap (9-146:11-151)
10 20 30 40 50
pF1KE5 MALQRTHSLLLLLLLTLLGLGLVQPSYGQDGMYQRFLRQHVHPEETGGSDRYCNLMMQ
:::::: .. ::. . . : : :::.: : . :: :.
CCDS95 MAPARAGCCPLLLLLLGLWVAEVLVRAKPKDMTSSQWFKTQHVQP-----SPQACNSAMS
10 20 30 40 50
60 70 80 90 100 110
pF1KE5 RRKMTLYHCKRFNTFIHEDIWNIRSICSTTNIQCKNGKMNCHE--GVVKVTDCRDTGSSR
. .:: .:::.:: . .. :.: :: :::. :::. : ...: . :..
CCDS95 IINKYTERCKDLNTFLHEPFSSVAITCQTPNIACKNSCKNCHQSHGPMSLT-MGELTSGK
60 70 80 90 100 110
120 130 140
pF1KE5 APNCRYRAIASTRRVVIACE-------GNPQVPVHFDG
:::::. . ..::. : : ::::.:
CCDS95 YPNCRYKEKHLNTPYIVACDPPQQGDPGYPLVPVHLDKVV
120 130 140 150
147 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 22:12:16 2016 done: Mon Nov 7 22:12:16 2016
Total Scan time: 1.690 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]