Result of FASTA (omim) for
pFN21AE5016
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5016, 334 aa
1>>>pF1KE5016 334 - 334 aa - 334 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.6241+/-0.00029; mu= 12.5883+/- 0.018
mean_var=160.2026+/-33.906, 0's: 0 Z-trim(123.4): 356 B-trim: 1765 in 1/55
Lambda= 0.101330
statistics sampled from 42713 (43153) to 42713 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.796), E-opt: 0.2 (0.506), width: 16
Scan time: 7.710
The best scores are: opt bits E(85289)
NP_001013675 (OMIM: 613505) leucine-rich repeat-co ( 334) 2286 345.3 1.1e-94
NP_001010847 (OMIM: 615212) leucine-rich repeat-co ( 294) 464 78.9 1.5e-14
NP_001005210 (OMIM: 615213) leucine-rich repeat-co ( 341) 453 77.3 5e-14
NP_003052 (OMIM: 603742) slit homolog 1 protein pr (1534) 419 73.1 4.3e-12
XP_016877935 (OMIM: 614179) PREDICTED: immunoglobu ( 468) 399 69.6 1.5e-11
NP_001123610 (OMIM: 614179) immunoglobulin superfa ( 745) 399 69.8 2e-11
XP_011520143 (OMIM: 614179) PREDICTED: immunoglobu ( 745) 399 69.8 2e-11
NP_065902 (OMIM: 614179) immunoglobulin superfamil ( 745) 399 69.8 2e-11
XP_011520142 (OMIM: 614179) PREDICTED: immunoglobu ( 745) 399 69.8 2e-11
NP_001123609 (OMIM: 614179) immunoglobulin superfa ( 745) 399 69.8 2e-11
NP_001123608 (OMIM: 614179) immunoglobulin superfa ( 745) 399 69.8 2e-11
NP_003053 (OMIM: 603745) slit homolog 3 protein is (1523) 370 65.9 6.2e-10
NP_001258875 (OMIM: 603745) slit homolog 3 protein (1530) 370 65.9 6.2e-10
XP_016865268 (OMIM: 603745) PREDICTED: slit homolo (1460) 365 65.2 1e-09
XP_016864334 (OMIM: 603746) PREDICTED: slit homolo (1495) 363 64.9 1.2e-09
XP_011512211 (OMIM: 603746) PREDICTED: slit homolo (1499) 363 64.9 1.2e-09
XP_006714049 (OMIM: 603746) PREDICTED: slit homolo (1509) 363 64.9 1.3e-09
NP_001276065 (OMIM: 603746) slit homolog 2 protein (1521) 363 64.9 1.3e-09
NP_001276064 (OMIM: 603746) slit homolog 2 protein (1525) 363 64.9 1.3e-09
NP_004778 (OMIM: 603746) slit homolog 2 protein is (1529) 363 64.9 1.3e-09
XP_005248268 (OMIM: 603746) PREDICTED: slit homolo (1533) 363 64.9 1.3e-09
NP_001005214 (OMIM: 615218) leucine-rich repeat-co ( 313) 351 62.4 1.5e-09
NP_005536 (OMIM: 602059) immunoglobulin superfamil ( 428) 353 62.8 1.5e-09
NP_958934 (OMIM: 602059) immunoglobulin superfamil ( 428) 353 62.8 1.5e-09
NP_055632 (OMIM: 613356) TLR4 interactor with leuc ( 811) 348 62.4 3.8e-09
NP_075380 (OMIM: 181500,605566) reticulon-4 recept ( 473) 336 60.4 8.9e-09
NP_612490 (OMIM: 616236) chondroadherin-like prote ( 762) 334 60.3 1.5e-08
XP_005261427 (OMIM: 616236) PREDICTED: chondroadhe ( 771) 334 60.3 1.5e-08
XP_011528236 (OMIM: 616236) PREDICTED: chondroadhe ( 825) 334 60.4 1.6e-08
XP_011528235 (OMIM: 616236) PREDICTED: chondroadhe ( 830) 334 60.4 1.6e-08
XP_011528234 (OMIM: 616236) PREDICTED: chondroadhe ( 839) 334 60.4 1.6e-08
NP_001004432 (OMIM: 609794) leucine-rich repeat an ( 593) 329 59.5 2.1e-08
NP_848665 (OMIM: 610462) reticulon-4 receptor-like ( 420) 324 58.6 2.8e-08
NP_004961 (OMIM: 601489,615961) insulin-like growt ( 605) 322 58.5 4.3e-08
NP_848663 (OMIM: 610461) reticulon-4 receptor-like ( 441) 319 57.9 4.7e-08
NP_004479 (OMIM: 173511) platelet glycoprotein V p ( 560) 319 58.0 5.6e-08
NP_001139478 (OMIM: 601489,615961) insulin-like gr ( 643) 317 57.8 7.5e-08
NP_001094861 (OMIM: 609792) leucine-rich repeat an ( 592) 306 56.1 2.2e-07
NP_612449 (OMIM: 608843) vasorin precursor [Homo s ( 673) 306 56.2 2.3e-07
XP_011512212 (OMIM: 603746) PREDICTED: slit homolo (1159) 306 56.4 3.4e-07
NP_001333361 (OMIM: 606666,615311) leucine-rich re ( 927) 304 56.0 3.6e-07
XP_016885198 (OMIM: 300278,310500) PREDICTED: nyct ( 481) 296 54.6 5.2e-07
NP_072089 (OMIM: 300278,310500) nyctalopin precurs ( 481) 296 54.6 5.2e-07
NP_115605 (OMIM: 221200,609681) SLIT and NTRK-like ( 841) 297 55.0 6.8e-07
NP_060960 (OMIM: 606666,615311) leucine-rich repea ( 951) 296 54.9 8.2e-07
XP_011527507 (OMIM: 604808,615271) PREDICTED: leuc ( 649) 292 54.1 9.5e-07
NP_938205 (OMIM: 604808,615271) leucine-rich repea ( 649) 292 54.1 9.5e-07
XP_011527506 (OMIM: 604808,615271) PREDICTED: leuc ( 649) 292 54.1 9.5e-07
XP_005260739 (OMIM: 604808,615271) PREDICTED: leuc ( 649) 292 54.1 9.5e-07
NP_037413 (OMIM: 604808,615271) leucine-rich repea ( 649) 292 54.1 9.5e-07
>>NP_001013675 (OMIM: 613505) leucine-rich repeat-contai (334 aa)
initn: 2286 init1: 2286 opt: 2286 Z-score: 1821.1 bits: 345.3 E(85289): 1.1e-94
Smith-Waterman score: 2286; 99.4% identity (99.7% similar) in 334 aa overlap (1-334:1-334)
10 20 30 40 50 60
pF1KE5 MRGPSWLRPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPGGLASCSAL
:::::: :::::::::::::::::::.:::::::::::::::::::::::::::::::::
NP_001 MRGPSWSRPRPLLLLLLLLSPWPVWAQVSATASPSGSLGAPDCPEVCTCVPGGLASCSAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 SLPAVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWGLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLPAVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWGLGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 LQLLDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDNELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQLLDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDNELA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 ALAPGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRLTLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALAPGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRLTLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 PLTAFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRLRTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLTAFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRLRTA
250 260 270 280 290 300
310 320 330
pF1KE5 ALRPPRPPDPNPDPDPHGCASPADPGSPAAAAQA
::::::::::::::::::::::::::::::::::
NP_001 ALRPPRPPDPNPDPDPHGCASPADPGSPAAAAQA
310 320 330
>>NP_001010847 (OMIM: 615212) leucine-rich repeat-contai (294 aa)
initn: 547 init1: 368 opt: 464 Z-score: 382.2 bits: 78.9 E(85289): 1.5e-14
Smith-Waterman score: 464; 35.4% identity (60.4% similar) in 260 aa overlap (38-293:21-278)
10 20 30 40 50 60
pF1KE5 RPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPD--CPEVCTCVPGGLASCSALSLPAV
: :: :: :.:. ..: .::.:
NP_001 MRPRAPACAAAALGLCSLLLLLAPGHACPAGCACTDPHTVDCRDRGLPSV
10 20 30 40 50
70 80 90 100 110 120
pF1KE5 PPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWGLGALQLLD
: . : .: ::. ::.. .: : : : ::.:.:.:.:.. .: : . : .::
NP_001 PDPFPLDVRKLLVAGNRIQRIPEDFFIFYGDLVYLDFRNNSLRSLEEGTFSGSAKLVFLD
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE5 LSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDNELAALAPG
:: :.: :. :.: : .::::.: :. .. :. .: :. : :.::.: .:. .
NP_001 LSYNNLTQLGAGAFRSAGRLVKLSLANNNLVGVHEDAFETLESLQVLELNDNNLRSLSVA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE5 LLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHP--LPASEAETVLCVWPGRLTLSPLT
:. :::: .:.: :::: : : . : .:.... :: . : . : : . :
NP_001 ALAALPALRSLRLDGNPWLCDCDFAHLFSWIQENASKLPKGLDE-IQCSLPMESRRISLR
180 190 200 210 220
250 260 270 280 290 300
pF1KE5 AFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRLRTAALR
.:.:.::.: :.: :: .. : : .... : . :.. .. : :
NP_001 ELSEASFSECRFSLSLTDLCIIIFSGVAVSIAAIISSFFLAT-VVQCLQRCAPNKDAEDE
230 240 250 260 270 280
310 320 330
pF1KE5 PPRPPDPNPDPDPHGCASPADPGSPAAAAQA
NP_001 DEDKDD
290
>>NP_001005210 (OMIM: 615213) leucine-rich repeat-contai (341 aa)
initn: 355 init1: 179 opt: 453 Z-score: 372.7 bits: 77.3 E(85289): 5e-14
Smith-Waterman score: 455; 32.4% identity (57.4% similar) in 296 aa overlap (3-290:45-329)
10 20
pF1KE5 MRGPSWLR------PRPLLLLLLLLSPWPVWA
: .: . :.: .::. :: .
NP_001 SCLPVSQTLDSMDTVLMGSLQHCCCLLPKMGDTWAQLPWPGPPHPAMLLISLLLAAGLM-
20 30 40 50 60 70
30 40 50 60 70 80
pF1KE5 HVSATASPSGSLGAPDCPEVCTCVPGGLASCSALSLPAVPPGLSLRLRALLLDHNRVRAL
: .: .: :: .::: . ...::. : .::: : . : : : :::. :.
NP_001 HSDAGTS---------CPVLCTCR-NQVVDCSSQRLFSVPPDLPMDTRNLSLAHNRITAV
80 90 100 110 120
90 100 110 120 130 140
pF1KE5 PPGAFAGAGALQRLDLRENGLHSVHVRAFWGLGALQLLDLSANQLEALAPGTFAPLRALR
::: .. :: :::..:.: . : : :::: :.. . : ..:
NP_001 PPGYLTCYMELQVLDLHNNSLMELPRGLFLHAKRLAHLDLSYNNFSHVPADMFQEAHGLV
130 140 150 160 170 180
150 160 170 180 190 200
pF1KE5 NLSLAGNR-LARLEPAALGALPLLRSLSLQDNELAALAPGLLGRLPALDALHLRGNPWGC
...:. : : :..: :. .: ::.:.:. . :: :. : ::.: .:.. :::: :
NP_001 HIDLSHNPWLRRVHPQAFQGLMQLRDLDLSYGGLAFLSLEALEGLPGLVTLQIGGNPWVC
190 200 210 220 230 240
210 220 230 240 250 260
pF1KE5 GCALRPLCAWLR-RHPLPASEAETVLCVWPGRLTLSPLTAFSDAAFSHCAQPLALRDLAV
::...:: ::: : ..... . : : .. .:: .... .:. : :.: :
NP_001 GCTMEPLLKWLRNRIQRCTADSQLAECRGPPEVEGAPLFSLTEESFKACHLTLTLDDYLF
250 260 270 280 290 300
270 280 290 300 310 320
pF1KE5 VYTLGPASFLVSLASCLALGSGLTACRARRRRLRTAALRPPRPPDPNPDPDPHGCASPAD
. .: . ..:.:. . :: . :
NP_001 IAFVGFVVSIASVATNFLLGITANCCHRWSKASEEEEI
310 320 330 340
>>NP_003052 (OMIM: 603742) slit homolog 1 protein precur (1534 aa)
initn: 1205 init1: 292 opt: 419 Z-score: 338.0 bits: 73.1 E(85289): 4.3e-12
Smith-Waterman score: 419; 35.8% identity (63.7% similar) in 204 aa overlap (34-237:273-472)
10 20 30 40 50 60
pF1KE5 PSWLRPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPGGLASCSALSLP
:. .:.. .:: .::: .:...: . .:
NP_003 SGPASLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSGSCPAMCTC-SNGIVDCRGKGLT
250 260 270 280 290 300
70 80 90 100 110 120
pF1KE5 AVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWGLGALQL
:.: .: . . :. : ....:::::. :.:.:: .: . . :: :: .:.
NP_003 AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNS
310 320 330 340 350 360
130 140 150 160 170 180
pF1KE5 LDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDNELAALA
: : .:.. : :.:. : .:. : : .:.. ..: :. : : ::: ::.. .::
NP_003 LVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA
370 380 390 400 410 420
190 200 210 220 230 240
pF1KE5 PGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRLTLSPLT
: . : :...::: ::. : : :. : .:: .:. .: :. :. : ::
NP_003 KGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGAR---CASPRRLANKRIG
430 440 450 460 470
250 260 270 280 290 300
pF1KE5 AFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRLRTAALR
NP_003 QIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANVVECSSLKLTKIPERI
480 490 500 510 520 530
>--
initn: 445 init1: 245 opt: 355 Z-score: 287.4 bits: 63.7 E(85289): 2.8e-09
Smith-Waterman score: 355; 32.2% identity (62.5% similar) in 208 aa overlap (43-247:513-716)
20 30 40 50 60 70
pF1KE5 LLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPGGLASCSALSLPAVPPGLSLR
::. : : .... ::.:.: .: .
NP_003 KKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRC-EANVVECSSLKLTKIPERIPQS
490 500 510 520 530 540
80 90 100 110 120 130
pF1KE5 LRALLLDHNRVRALPP-GAFAGAGALQRLDLRENGLHSVHVRAFWGLGALQLLDLSANQL
: :..:.. : : : :....: .: . .. :: : .... : :.::::
NP_003 TAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQL
550 560 570 580 590 600
140 150 160 170 180 190
pF1KE5 EALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDNELAALAPGLLGRLP
:.. : : : .::.: : .::.. .. .. .: .: ::: ::......:: . :
NP_003 ESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQ
610 620 630 640 650 660
200 210 220 230 240
pF1KE5 ALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRLTLSPL--TAFSDAA
.:..:.: .::..:.: : : .:::.. . ... . : : : :: .:: :
NP_003 SLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPR---CQNPDFLRQIPLQDVAFPDFR
670 680 690 700 710
250 260 270 280 290 300
pF1KE5 FSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRLRTAALRPPRPPD
NP_003 CEEGQEEGGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIPKNVTELYLDGNQFTLVPG
720 730 740 750 760 770
>--
initn: 570 init1: 257 opt: 264 Z-score: 215.6 bits: 50.4 E(85289): 2.9e-05
Smith-Waterman score: 306; 29.7% identity (51.7% similar) in 286 aa overlap (4-260:5-271)
10 20 30 40 50
pF1KE5 MRGPSWLR---P-RPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPGGLA
:.: : :: : ::: . : ::: :: .:::. : .
NP_003 MALTPGWGSSAGPVRPELWLLLWAAAW--------------RLGASACPALCTCT-GTTV
10 20 30 40
60 70 80 90
pF1KE5 SCSALSLPAVP---P----------------------GLSLRLRALLLDHNRVRALPPGA
.: . .: :.: : ::. .::.: : .:.. :. ::
NP_003 DCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLK-QLRVLQLMENQIGAVERGA
50 60 70 80 90 100
100 110 120 130 140 150
pF1KE5 FAGAGALQRLDLRENGLHSVHVRAFWGLGALQLLDLSANQLEALAPGTFAPLRALRNLSL
: :.:: : .: :: . : . ::. :::: : ..:. .: :.::.:
NP_003 FDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQL
110 120 130 140 150 160
160 170 180 190 200 210
pF1KE5 AGNRLARLEPAALGALPLLRSLSLQDNELAALAPGLLGRLPALDALHLRGNPWGCGCALR
:... .: .:. :: :. :.:..:..... . ....: : ...:..: : : :
NP_003 DKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLA
170 180 190 200 210 220
220 230 240 250 260 270
pF1KE5 PLCAWLRRHPLPASEAETVLCVWPGRLTLSPLTAFSDAAFSHCAQPLALRDLAVVYTLGP
: :::..: . .. : :. : .. . . :: .: : :
NP_003 WLSQWLRQRPTIGLFTQ---CSGPASLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSGS
230 240 250 260 270 280
280 290 300 310 320 330
pF1KE5 ASFLVSLASCLALGSGLTACRARRRRLRTAALRPPRPPDPNPDPDPHGCASPADPGSPAA
NP_003 CPAMCTCSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLS
290 300 310 320 330 340
>>XP_016877935 (OMIM: 614179) PREDICTED: immunoglobulin (468 aa)
initn: 380 init1: 334 opt: 399 Z-score: 328.4 bits: 69.6 E(85289): 1.5e-11
Smith-Waterman score: 399; 35.7% identity (57.6% similar) in 238 aa overlap (22-256:8-233)
10 20 30 40 50
pF1KE5 MRGPSWLRPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPG---GLASC
: ::: .....: ::: :.:: .:.:
XP_016 MFPLRALWLVWALLGVAGS---------CPEPCACVDKYAHQFADC
10 20 30
60 70 80 90 100 110
pF1KE5 SALSLPAVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWG
. : :: :: . .: :. :.. .: :::: . . : : .: ...:. :.
XP_016 AYKELREVPEGLPANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAV
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE5 LGALQLLDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDN
:. :. :::: : . .. . . : ::. :.. :::. : :::::: :::: ...:
XP_016 LSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNN
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE5 ELAALAPGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRL
.: .:::: . : ::. :.: ::. :::.: : :: . : ... :. : :
XP_016 RLRTLAPGTFDALSALSHLQLYHNPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPAL
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE5 TLSPLTAFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRL
:. . :. :: :
XP_016 QGVPV--YRLPALP-CAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQL
220 230 240 250 260 270
>>NP_001123610 (OMIM: 614179) immunoglobulin superfamily (745 aa)
initn: 411 init1: 334 opt: 399 Z-score: 326.0 bits: 69.8 E(85289): 2e-11
Smith-Waterman score: 399; 35.7% identity (57.6% similar) in 238 aa overlap (22-256:8-233)
10 20 30 40 50
pF1KE5 MRGPSWLRPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPG---GLASC
: ::: .....: ::: :.:: .:.:
NP_001 MFPLRALWLVWALLGVAGS---------CPEPCACVDKYAHQFADC
10 20 30
60 70 80 90 100 110
pF1KE5 SALSLPAVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWG
. : :: :: . .: :. :.. .: :::: . . : : .: ...:. :.
NP_001 AYKELREVPEGLPANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAV
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE5 LGALQLLDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDN
:. :. :::: : . .. . . : ::. :.. :::. : :::::: :::: ...:
NP_001 LSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNN
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE5 ELAALAPGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRL
.: .:::: . : ::. :.: ::. :::.: : :: . : ... :. : :
NP_001 RLRTLAPGTFDALSALSHLQLYHNPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPAL
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE5 TLSPLTAFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRL
:. . :. :: :
NP_001 QGVPV--YRLPALP-CAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQL
220 230 240 250 260 270
>>XP_011520143 (OMIM: 614179) PREDICTED: immunoglobulin (745 aa)
initn: 411 init1: 334 opt: 399 Z-score: 326.0 bits: 69.8 E(85289): 2e-11
Smith-Waterman score: 399; 35.7% identity (57.6% similar) in 238 aa overlap (22-256:8-233)
10 20 30 40 50
pF1KE5 MRGPSWLRPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPG---GLASC
: ::: .....: ::: :.:: .:.:
XP_011 MFPLRALWLVWALLGVAGS---------CPEPCACVDKYAHQFADC
10 20 30
60 70 80 90 100 110
pF1KE5 SALSLPAVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWG
. : :: :: . .: :. :.. .: :::: . . : : .: ...:. :.
XP_011 AYKELREVPEGLPANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAV
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE5 LGALQLLDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDN
:. :. :::: : . .. . . : ::. :.. :::. : :::::: :::: ...:
XP_011 LSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNN
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE5 ELAALAPGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRL
.: .:::: . : ::. :.: ::. :::.: : :: . : ... :. : :
XP_011 RLRTLAPGTFDALSALSHLQLYHNPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPAL
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE5 TLSPLTAFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRL
:. . :. :: :
XP_011 QGVPV--YRLPALP-CAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQL
220 230 240 250 260 270
>>NP_065902 (OMIM: 614179) immunoglobulin superfamily co (745 aa)
initn: 411 init1: 334 opt: 399 Z-score: 326.0 bits: 69.8 E(85289): 2e-11
Smith-Waterman score: 399; 35.7% identity (57.6% similar) in 238 aa overlap (22-256:8-233)
10 20 30 40 50
pF1KE5 MRGPSWLRPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPG---GLASC
: ::: .....: ::: :.:: .:.:
NP_065 MFPLRALWLVWALLGVAGS---------CPEPCACVDKYAHQFADC
10 20 30
60 70 80 90 100 110
pF1KE5 SALSLPAVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWG
. : :: :: . .: :. :.. .: :::: . . : : .: ...:. :.
NP_065 AYKELREVPEGLPANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAV
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE5 LGALQLLDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDN
:. :. :::: : . .. . . : ::. :.. :::. : :::::: :::: ...:
NP_065 LSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNN
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE5 ELAALAPGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRL
.: .:::: . : ::. :.: ::. :::.: : :: . : ... :. : :
NP_065 RLRTLAPGTFDALSALSHLQLYHNPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPAL
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE5 TLSPLTAFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRL
:. . :. :: :
NP_065 QGVPV--YRLPALP-CAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQL
220 230 240 250 260 270
>>XP_011520142 (OMIM: 614179) PREDICTED: immunoglobulin (745 aa)
initn: 411 init1: 334 opt: 399 Z-score: 326.0 bits: 69.8 E(85289): 2e-11
Smith-Waterman score: 399; 35.7% identity (57.6% similar) in 238 aa overlap (22-256:8-233)
10 20 30 40 50
pF1KE5 MRGPSWLRPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPG---GLASC
: ::: .....: ::: :.:: .:.:
XP_011 MFPLRALWLVWALLGVAGS---------CPEPCACVDKYAHQFADC
10 20 30
60 70 80 90 100 110
pF1KE5 SALSLPAVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWG
. : :: :: . .: :. :.. .: :::: . . : : .: ...:. :.
XP_011 AYKELREVPEGLPANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAV
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE5 LGALQLLDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDN
:. :. :::: : . .. . . : ::. :.. :::. : :::::: :::: ...:
XP_011 LSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNN
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE5 ELAALAPGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRL
.: .:::: . : ::. :.: ::. :::.: : :: . : ... :. : :
XP_011 RLRTLAPGTFDALSALSHLQLYHNPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPAL
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE5 TLSPLTAFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRL
:. . :. :: :
XP_011 QGVPV--YRLPALP-CAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQL
220 230 240 250 260 270
>>NP_001123609 (OMIM: 614179) immunoglobulin superfamily (745 aa)
initn: 411 init1: 334 opt: 399 Z-score: 326.0 bits: 69.8 E(85289): 2e-11
Smith-Waterman score: 399; 35.7% identity (57.6% similar) in 238 aa overlap (22-256:8-233)
10 20 30 40 50
pF1KE5 MRGPSWLRPRPLLLLLLLLSPWPVWAHVSATASPSGSLGAPDCPEVCTCVPG---GLASC
: ::: .....: ::: :.:: .:.:
NP_001 MFPLRALWLVWALLGVAGS---------CPEPCACVDKYAHQFADC
10 20 30
60 70 80 90 100 110
pF1KE5 SALSLPAVPPGLSLRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWG
. : :: :: . .: :. :.. .: :::: . . : : .: ...:. :.
NP_001 AYKELREVPEGLPANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAV
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE5 LGALQLLDLSANQLEALAPGTFAPLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDN
:. :. :::: : . .. . . : ::. :.. :::. : :::::: :::: ...:
NP_001 LSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNN
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE5 ELAALAPGLLGRLPALDALHLRGNPWGCGCALRPLCAWLRRHPLPASEAETVLCVWPGRL
.: .:::: . : ::. :.: ::. :::.: : :: . : ... :. : :
NP_001 RLRTLAPGTFDALSALSHLQLYHNPFHCGCGLVWLQAWAASTRVSLPEPDSIACASPPAL
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE5 TLSPLTAFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASCLALGSGLTACRARRRRL
:. . :. :: :
NP_001 QGVPV--YRLPALP-CAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIADGHPTPRLQWQL
220 230 240 250 260 270
334 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 04:11:14 2016 done: Tue Nov 8 04:11:15 2016
Total Scan time: 7.710 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]