FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE4580, 800 aa
  1>>>pF1KE4580 800 - 800 aa - 800 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.0257+/-0.00099; mu= 10.6858+/- 0.060
 mean_var=213.7744+/-43.437, 0's: 0 Z-trim(112.2): 16  B-trim: 138 in 2/52
 Lambda= 0.087720
 statistics sampled from 12953 (12962) to 12953 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.719), E-opt: 0.2 (0.398), width:  16
 Scan time:  4.970

The best scores are:                                      opt bits E(32554)
CCDS31611.1 SART1 gene_id:9092|Hs108|chr11         ( 800) 5161 666.4  5e-191


>>CCDS31611.1 SART1 gene_id:9092|Hs108|chr11              (800 aa)
 initn: 5161 init1: 5161 opt: 5161  Z-score: 3543.0  bits: 666.4 E(32554): 5e-191
Smith-Waterman score: 5161; 100.0% identity (100.0% similar) in 800 aa overlap (1-800:1-800)

               10        20        30        40        50        60
pF1KE4 MGSSKKHRGEKEAAGTTAAAGTGGATEQPPRHREHKKHKHRSGGSGGSGGERRKRSRERG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MGSSKKHRGEKEAAGTTAAAGTGGATEQPPRHREHKKHKHRSGGSGGSGGERRKRSRERG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 GERGSGRRGAEAEARSSTHGRERSQAEPSERRVKREKRDDGYEAAASSKTSSGDASSLSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GERGSGRRGAEAEARSSTHGRERSQAEPSERRVKREKRDDGYEAAASSKTSSGDASSLSI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 EETNKLRAKLGLKPLEVNAIKKEAGTKEEPVTADVINPMALRQREELREKLAAAKEKRLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EETNKLRAKLGLKPLEVNAIKKEAGTKEEPVTADVINPMALRQREELREKLAAAKEKRLL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 NQKLGKIKTLGEDDPWLDDTAAWIERSRQLQKEKDLAEKRAKLLEEMDQEFGVSTLVEEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 NQKLGKIKTLGEDDPWLDDTAAWIERSRQLQKEKDLAEKRAKLLEEMDQEFGVSTLVEEE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 FGQRRQDLYSARDLQGLTVEHAIDSFREGETMILTLKDKGVLQEEEDVLVNVNLVDKERA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 FGQRRQDLYSARDLQGLTVEHAIDSFREGETMILTLKDKGVLQEEEDVLVNVNLVDKERA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE4 EKNVELRKKKPDYLPYAEDESVDDLAQQKPRSILSKYDEELEGERPHSFRLEQGGTADGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EKNVELRKKKPDYLPYAEDESVDDLAQQKPRSILSKYDEELEGERPHSFRLEQGGTADGL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE4 RERELEEIRAKLRLQAQSLSTVGPRLASEYLTPEEMVTFKKTKRRVKKIRKKEKEVVVRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RERELEEIRAKLRLQAQSLSTVGPRLASEYLTPEEMVTFKKTKRRVKKIRKKEKEVVVRA
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE4 DDLLPLGDQTQDGDFGSRLRGRGRRRVSEVEEEKEPVPQPLPSDDTRVENMDISDEEEGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DDLLPLGDQTQDGDFGSRLRGRGRRRVSEVEEEKEPVPQPLPSDDTRVENMDISDEEEGG
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE4 APPPGSPQVLEEDEAELELQKQLEKGRRLRQLQQLQQLRDSGEKVVEIVKKLESRQRGWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 APPPGSPQVLEEDEAELELQKQLEKGRRLRQLQQLQQLRDSGEKVVEIVKKLESRQRGWE
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE4 EDEDPERKGAIVFNATSEFCRTLGEIPTYGLAGNREEQEELMDFERDEERSANGGSESDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EDEDPERKGAIVFNATSEFCRTLGEIPTYGLAGNREEQEELMDFERDEERSANGGSESDG
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KE4 EENIGWSTVNLDEEKQQQDFSASSTTILDEEPIVNRGLAAALLLCQNKGLLETTVQKVAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EENIGWSTVNLDEEKQQQDFSASSTTILDEEPIVNRGLAAALLLCQNKGLLETTVQKVAR
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KE4 VKAPNKSLPSAVYCIEDKMAIDDKYSRREEYRGFTQDFKEKDGYKPDVKIEYVDETGRKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VKAPNKSLPSAVYCIEDKMAIDDKYSRREEYRGFTQDFKEKDGYKPDVKIEYVDETGRKL
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KE4 TPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLGTVALLQEKQKAQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLGTVALLQEKQKAQK
              730       740       750       760       770       780

              790       800
pF1KE4 TPYIVLSGSGKSMNANTITK
       ::::::::::::::::::::
CCDS31 TPYIVLSGSGKSMNANTITK
              790       800




800 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 23:47:21 2016 done: Sat Nov  5 23:47:22 2016
 Total Scan time:  4.970 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]