Result of FASTA (omim) for
pFN21AE4550
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4550, 657 aa
1>>>pF1KE4550 657 - 657 aa - 657 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7656+/-0.000416; mu= 12.0387+/- 0.026
mean_var=97.2799+/-18.685, 0's: 0 Z-trim(113.3): 65 B-trim: 0 in 0/51
Lambda= 0.130036
statistics sampled from 22553 (22618) to 22553 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.618), E-opt: 0.2 (0.265), width: 16
Scan time: 10.600
The best scores are: opt bits E(85289)
NP_005122 (OMIM: 606930) THO complex subunit 1 [Ho ( 657) 4367 830.2 0
XP_011524074 (OMIM: 606930) PREDICTED: THO complex ( 664) 4343 825.7 0
XP_016881592 (OMIM: 606930) PREDICTED: THO complex ( 526) 3438 655.9 1e-187
XP_011524075 (OMIM: 606930) PREDICTED: THO complex ( 526) 3438 655.9 1e-187
XP_011524076 (OMIM: 606930) PREDICTED: THO complex ( 357) 2316 445.4 1.7e-124
XP_016881593 (OMIM: 606930) PREDICTED: THO complex ( 307) 2022 390.2 6e-108
>>NP_005122 (OMIM: 606930) THO complex subunit 1 [Homo s (657 aa)
initn: 4367 init1: 4367 opt: 4367 Z-score: 4431.3 bits: 830.2 E(85289): 0
Smith-Waterman score: 4367; 100.0% identity (100.0% similar) in 657 aa overlap (1-657:1-657)
10 20 30 40 50 60
pF1KE4 MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQVPGSENEKKCTLDQAFRGILE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQVPGSENEKKCTLDQAFRGILE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSIPIDYNLYRKFWS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSIPIDYNLYRKFWS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRIIRKRTAPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRIIRKRTAPE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 DFLGKGPTKKILMGNEELTRLWNLCPDNMEACKSETREHMPTLEEFFEEAIEQADPENMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DFLGKGPTKKILMGNEELTRLWNLCPDNMEACKSETREHMPTLEEFFEEAIEQADPENMV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE4 KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIR
550 560 570 580 590 600
610 620 630 640 650
pF1KE4 QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS
610 620 630 640 650
>>XP_011524074 (OMIM: 606930) PREDICTED: THO complex sub (664 aa)
initn: 2668 init1: 2668 opt: 4343 Z-score: 4406.9 bits: 825.7 E(85289): 0
Smith-Waterman score: 4343; 98.9% identity (98.9% similar) in 664 aa overlap (1-657:1-664)
10 20 30 40 50 60
pF1KE4 MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQVPGSENEKKCTLDQAFRGILE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQVPGSENEKKCTLDQAFRGILE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSIPIDYNLYRKFWS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSIPIDYNLYRKFWS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
310 320 330 340 350 360
370 380 390 400 410
pF1KE4 YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKE-------RTSDTKPTRII
:::::::::::::::::::::::::::::::::::::::::: :::::::::::
XP_011 YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKESVCFVHDRTSDTKPTRII
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE4 RKRTAPEDFLGKGPTKKILMGNEELTRLWNLCPDNMEACKSETREHMPTLEEFFEEAIEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RKRTAPEDFLGKGPTKKILMGNEELTRLWNLCPDNMEACKSETREHMPTLEEFFEEAIEQ
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE4 ADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKEL
490 500 510 520 530 540
540 550 560 570 580 590
pF1KE4 PPPSEEIKTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPPSEEIKTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLE
550 560 570 580 590 600
600 610 620 630 640 650
pF1KE4 MKDSEIRQIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKDSEIRQIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDN
610 620 630 640 650 660
pF1KE4 ETNS
::::
XP_011 ETNS
>>XP_016881592 (OMIM: 606930) PREDICTED: THO complex sub (526 aa)
initn: 1763 init1: 1763 opt: 3438 Z-score: 3490.9 bits: 655.9 E(85289): 1e-187
Smith-Waterman score: 3438; 98.7% identity (98.7% similar) in 526 aa overlap (139-657:1-526)
110 120 130 140 150 160
pF1KE4 CDTIFTFVEKNVATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFP
::::::::::::::::::::::::::::::
XP_016 MCNDLLRRLSKSQNTVFCGRIQLFLARLFP
10 20 30
170 180 190 200 210 220
pF1KE4 LSEKSGLNLQSQFNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSEKSGLNLQSQFNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSI
40 50 60 70 80 90
230 240 250 260 270 280
pF1KE4 PIDYNLYRKFWSLQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PIDYNLYRKFWSLQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEE
100 110 120 130 140 150
290 300 310 320 330 340
pF1KE4 LKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDE
160 170 180 190 200 210
350 360 370 380 390 400
pF1KE4 QSLWIEDTTKSVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKE------
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QSLWIEDTTKSVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKESVCFVH
220 230 240 250 260 270
410 420 430 440 450 460
pF1KE4 -RTSDTKPTRIIRKRTAPEDFLGKGPTKKILMGNEELTRLWNLCPDNMEACKSETREHMP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DRTSDTKPTRIIRKRTAPEDFLGKGPTKKILMGNEELTRLWNLCPDNMEACKSETREHMP
280 290 300 310 320 330
470 480 490 500 510 520
pF1KE4 TLEEFFEEAIEQADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLEEFFEEAIEQADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEY
340 350 360 370 380 390
530 540 550 560 570 580
pF1KE4 LENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKL
400 410 420 430 440 450
590 600 610 620 630 640
pF1KE4 GEQWKILAPYLEMKDSEIRQIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEQWKILAPYLEMKDSEIRQIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSG
460 470 480 490 500 510
650
pF1KE4 LSDLAESLTNDNETNS
::::::::::::::::
XP_016 LSDLAESLTNDNETNS
520
>>XP_011524075 (OMIM: 606930) PREDICTED: THO complex sub (526 aa)
initn: 1763 init1: 1763 opt: 3438 Z-score: 3490.9 bits: 655.9 E(85289): 1e-187
Smith-Waterman score: 3438; 98.7% identity (98.7% similar) in 526 aa overlap (139-657:1-526)
110 120 130 140 150 160
pF1KE4 CDTIFTFVEKNVATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFP
::::::::::::::::::::::::::::::
XP_011 MCNDLLRRLSKSQNTVFCGRIQLFLARLFP
10 20 30
170 180 190 200 210 220
pF1KE4 LSEKSGLNLQSQFNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSEKSGLNLQSQFNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSI
40 50 60 70 80 90
230 240 250 260 270 280
pF1KE4 PIDYNLYRKFWSLQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PIDYNLYRKFWSLQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEE
100 110 120 130 140 150
290 300 310 320 330 340
pF1KE4 LKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDE
160 170 180 190 200 210
350 360 370 380 390 400
pF1KE4 QSLWIEDTTKSVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKE------
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QSLWIEDTTKSVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKESVCFVH
220 230 240 250 260 270
410 420 430 440 450 460
pF1KE4 -RTSDTKPTRIIRKRTAPEDFLGKGPTKKILMGNEELTRLWNLCPDNMEACKSETREHMP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DRTSDTKPTRIIRKRTAPEDFLGKGPTKKILMGNEELTRLWNLCPDNMEACKSETREHMP
280 290 300 310 320 330
470 480 490 500 510 520
pF1KE4 TLEEFFEEAIEQADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLEEFFEEAIEQADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEY
340 350 360 370 380 390
530 540 550 560 570 580
pF1KE4 LENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKL
400 410 420 430 440 450
590 600 610 620 630 640
pF1KE4 GEQWKILAPYLEMKDSEIRQIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEQWKILAPYLEMKDSEIRQIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSG
460 470 480 490 500 510
650
pF1KE4 LSDLAESLTNDNETNS
::::::::::::::::
XP_011 LSDLAESLTNDNETNS
520
>>XP_011524076 (OMIM: 606930) PREDICTED: THO complex sub (357 aa)
initn: 1714 init1: 1714 opt: 2316 Z-score: 2356.0 bits: 445.4 E(85289): 1.7e-124
Smith-Waterman score: 2316; 98.0% identity (98.0% similar) in 357 aa overlap (308-657:1-357)
280 290 300 310 320 330
pF1KE4 DTQASRKKMEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVK
::::::::::::::::::::::::::::::
XP_011 MDLQLSDSNFRRHILLQYLILFQYLKGQVK
10 20 30
340 350 360 370 380 390
pF1KE4 FKSSNYVLTDEQSLWIEDTTKSVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FKSSNYVLTDEQSLWIEDTTKSVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCP
40 50 60 70 80 90
400 410 420 430 440 450
pF1KE4 SFVKE-------RTSDTKPTRIIRKRTAPEDFLGKGPTKKILMGNEELTRLWNLCPDNME
::::: ::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SFVKESVCFVHDRTSDTKPTRIIRKRTAPEDFLGKGPTKKILMGNEELTRLWNLCPDNME
100 110 120 130 140 150
460 470 480 490 500 510
pF1KE4 ACKSETREHMPTLEEFFEEAIEQADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ACKSETREHMPTLEEFFEEAIEQADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQP
160 170 180 190 200 210
520 530 540 550 560 570
pF1KE4 TNQQFKSLPEYLENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENESPDVRRDKPVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TNQQFKSLPEYLENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENESPDVRRDKPVT
220 230 240 250 260 270
580 590 600 610 620 630
pF1KE4 GEQIEVFANKLGEQWKILAPYLEMKDSEIRQIECDSEDMKMRAKQLLVAWQDQEGVHATP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEQIEVFANKLGEQWKILAPYLEMKDSEIRQIECDSEDMKMRAKQLLVAWQDQEGVHATP
280 290 300 310 320 330
640 650
pF1KE4 ENLINALNKSGLSDLAESLTNDNETNS
:::::::::::::::::::::::::::
XP_011 ENLINALNKSGLSDLAESLTNDNETNS
340 350
>>XP_016881593 (OMIM: 606930) PREDICTED: THO complex sub (307 aa)
initn: 2022 init1: 2022 opt: 2022 Z-score: 2058.9 bits: 390.2 E(85289): 6e-108
Smith-Waterman score: 2022; 100.0% identity (100.0% similar) in 306 aa overlap (1-306:1-306)
10 20 30 40 50 60
pF1KE4 MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQVPGSENEKKCTLDQAFRGILE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQVPGSENEKKCTLDQAFRGILE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSIPIDYNLYRKFWS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSIPIDYNLYRKFWS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
::::::
XP_016 FLTSEKQ
657 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 00:01:52 2016 done: Sun Nov 6 00:01:53 2016
Total Scan time: 10.600 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]