Result of FASTA (ccds) for
pFN21AE4501
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4501, 527 aa
1>>>pF1KE4501 527 - 527 aa - 527 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8165+/-0.00107; mu= 14.9750+/- 0.063
mean_var=65.5994+/-13.394, 0's: 0 Z-trim(103.1): 46 B-trim: 306 in 1/47
Lambda= 0.158352
statistics sampled from 7219 (7247) to 7219 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.588), E-opt: 0.2 (0.223), width: 16
Scan time: 3.020
The best scores are: opt bits E(32554)
CCDS14260.1 MAOA gene_id:4128|Hs108|chrX ( 527) 3566 824.0 0
CCDS59163.1 MAOA gene_id:4128|Hs108|chrX ( 394) 2692 624.3 7.9e-179
CCDS14261.1 MAOB gene_id:4129|Hs108|chrX ( 520) 2648 614.3 1.1e-175
CCDS12787.1 IL4I1 gene_id:259307|Hs108|chr19 ( 567) 356 90.7 4.9e-18
CCDS12786.1 IL4I1 gene_id:259307|Hs108|chr19 ( 589) 356 90.7 5.1e-18
>>CCDS14260.1 MAOA gene_id:4128|Hs108|chrX (527 aa)
initn: 3566 init1: 3566 opt: 3566 Z-score: 4401.0 bits: 824.0 E(32554): 0
Smith-Waterman score: 3566; 100.0% identity (100.0% similar) in 527 aa overlap (1-527:1-527)
10 20 30 40 50 60
pF1KE4 MENQEKASIAGHMFDVVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGGRTYTIRNEHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MENQEKASIAGHMFDVVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGGRTYTIRNEHV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 DYVDVGGAYVGPTQNRILRLSKELGIETYKVNVSERLVQYVKGKTYPFRGAFPPVWNPIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 DYVDVGGAYVGPTQNRILRLSKELGIETYKVNVSERLVQYVKGKTYPFRGAFPPVWNPIA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 YLDYNNLWRTIDNMGKEIPTDAPWEAQHADKWDKMTMKELIDKICWTKTARRFAYLFVNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 YLDYNNLWRTIDNMGKEIPTDAPWEAQHADKWDKMTMKELIDKICWTKTARRFAYLFVNI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 NVTSEPHEVSALWFLWYVKQCGGTTRIFSVTNGGQERKFVGGSGQVSERIMDLLGDQVKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 NVTSEPHEVSALWFLWYVKQCGGTTRIFSVTNGGQERKFVGGSGQVSERIMDLLGDQVKL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 NHPVTHVDQSSDNIIIETLNHEHYECKYVINAIPPTLTAKIHFRPELPAERNQLIQRLPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 NHPVTHVDQSSDNIIIETLNHEHYECKYVINAIPPTLTAKIHFRPELPAERNQLIQRLPM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 GAVIKCMMYYKEAFWKKKDYCGCMIIEDEDAPISITLDDTKPDGSLPAIMGFILARKADR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GAVIKCMMYYKEAFWKKKDYCGCMIIEDEDAPISITLDDTKPDGSLPAIMGFILARKADR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 LAKLHKEIRKKKICELYAKVLGSQEALHPVHYEEKNWCEEQYSGGCYTAYFPPGIMTQYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LAKLHKEIRKKKICELYAKVLGSQEALHPVHYEEKNWCEEQYSGGCYTAYFPPGIMTQYG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 RVIRQPVGRIFFAGTETATKWSGYMEGAVEAGERAAREVLNGLGKVTEKDIWVQEPESKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 RVIRQPVGRIFFAGTETATKWSGYMEGAVEAGERAAREVLNGLGKVTEKDIWVQEPESKD
430 440 450 460 470 480
490 500 510 520
pF1KE4 VPAVEITHTFWERNLPSVSGLLKIIGFSTSVTALGFVLYKYKLLPRS
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VPAVEITHTFWERNLPSVSGLLKIIGFSTSVTALGFVLYKYKLLPRS
490 500 510 520
>>CCDS59163.1 MAOA gene_id:4128|Hs108|chrX (394 aa)
initn: 2692 init1: 2692 opt: 2692 Z-score: 3324.0 bits: 624.3 E(32554): 7.9e-179
Smith-Waterman score: 2692; 100.0% identity (100.0% similar) in 394 aa overlap (134-527:1-394)
110 120 130 140 150 160
pF1KE4 KTYPFRGAFPPVWNPIAYLDYNNLWRTIDNMGKEIPTDAPWEAQHADKWDKMTMKELIDK
::::::::::::::::::::::::::::::
CCDS59 MGKEIPTDAPWEAQHADKWDKMTMKELIDK
10 20 30
170 180 190 200 210 220
pF1KE4 ICWTKTARRFAYLFVNINVTSEPHEVSALWFLWYVKQCGGTTRIFSVTNGGQERKFVGGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 ICWTKTARRFAYLFVNINVTSEPHEVSALWFLWYVKQCGGTTRIFSVTNGGQERKFVGGS
40 50 60 70 80 90
230 240 250 260 270 280
pF1KE4 GQVSERIMDLLGDQVKLNHPVTHVDQSSDNIIIETLNHEHYECKYVINAIPPTLTAKIHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 GQVSERIMDLLGDQVKLNHPVTHVDQSSDNIIIETLNHEHYECKYVINAIPPTLTAKIHF
100 110 120 130 140 150
290 300 310 320 330 340
pF1KE4 RPELPAERNQLIQRLPMGAVIKCMMYYKEAFWKKKDYCGCMIIEDEDAPISITLDDTKPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 RPELPAERNQLIQRLPMGAVIKCMMYYKEAFWKKKDYCGCMIIEDEDAPISITLDDTKPD
160 170 180 190 200 210
350 360 370 380 390 400
pF1KE4 GSLPAIMGFILARKADRLAKLHKEIRKKKICELYAKVLGSQEALHPVHYEEKNWCEEQYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 GSLPAIMGFILARKADRLAKLHKEIRKKKICELYAKVLGSQEALHPVHYEEKNWCEEQYS
220 230 240 250 260 270
410 420 430 440 450 460
pF1KE4 GGCYTAYFPPGIMTQYGRVIRQPVGRIFFAGTETATKWSGYMEGAVEAGERAAREVLNGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 GGCYTAYFPPGIMTQYGRVIRQPVGRIFFAGTETATKWSGYMEGAVEAGERAAREVLNGL
280 290 300 310 320 330
470 480 490 500 510 520
pF1KE4 GKVTEKDIWVQEPESKDVPAVEITHTFWERNLPSVSGLLKIIGFSTSVTALGFVLYKYKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 GKVTEKDIWVQEPESKDVPAVEITHTFWERNLPSVSGLLKIIGFSTSVTALGFVLYKYKL
340 350 360 370 380 390
pF1KE4 LPRS
::::
CCDS59 LPRS
>>CCDS14261.1 MAOB gene_id:4129|Hs108|chrX (520 aa)
initn: 2646 init1: 2611 opt: 2648 Z-score: 3267.7 bits: 614.3 E(32554): 1.1e-175
Smith-Waterman score: 2648; 73.2% identity (90.5% similar) in 514 aa overlap (15-526:6-519)
10 20 30 40 50 60
pF1KE4 MENQEKASIAGHMFDVVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGGRTYTIRNEHV
::::.::::::..::::: . :..:.::::::::::::::.::..:
CCDS14 MSNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKV
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 DYVDVGGAYVGPTQNRILRLSKELGIETYKVNVSERLVQYVKGKTYPFRGAFPPVWNPIA
:::.::.::::::::::::.::::.:::::: :::...::::.::::: ::::::::.
CCDS14 KYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPIT
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 YLDYNNLWRTIDNMGKEIPTDAPWEAQHADKWDKMTMKELIDKICWTKTARRFAYLFVNI
:::.::.:::.:.::.:::.::::.: :..::.::::::.::.:::..:...: ::::.
CCDS14 YLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 NVTSEPHEVSALWFLWYVKQCGGTTRIFSVTNGGQERKFVGGSGQVSERIMDLLGDQVKL
::.: :::::::::::::::::::::.:.::::::::::::::::::::::::::.:::
CCDS14 CVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLGDRVKL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE4 NHPVTHVDQSSDNIIIETLNHEHYECKYVINAIPPTLTAKIHFRPELPAERNQLIQRLPM
..:: ..::. .:...:::::: :: ::::.:::::: :::: : :: :::.: :.:.
CCDS14 ERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE4 GAVIKCMMYYKEAFWKKKDYCGCMIIEDEDAPISITLDDTKPDGSLPAIMGFILARKADR
:.::::..:::: ::.:::::: :::. :.::.. :::::::.:. ::::::::.:: .
CCDS14 GSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARK
300 310 320 330 340 350
370 380 390 400 410 420
pF1KE4 LAKLHKEIRKKKICELYAKVLGSQEALHPVHYEEKNWCEEQYSGGCYTAYFPPGIMTQYG
::.: :: : ::.:::::::::: :::.::::::::::::::::::::.::::::.::::
CCDS14 LARLTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYG
360 370 380 390 400 410
430 440 450 460 470 480
pF1KE4 RVIRQPVGRIFFAGTETATKWSGYMEGAVEAGERAAREVLNGLGKVTEKDIWVQEPESKD
::.:::: ::.::::::::.::::::::::::::::::.:...::. : .:: .:::: :
CCDS14 RVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKIPEDEIWQSEPESVD
420 430 440 450 460 470
490 500 510 520
pF1KE4 VPAVEITHTFWERNLPSVSGLLKIIGFST--SVTALGFVLYKYKLLPRS
::: :: :: ::.:::: :::..::..: :.:::::. .: :: :
CCDS14 VPAQPITTTFLERHLPSVPGLLRLIGLTTIFSATALGFLAHKRGLLVRV
480 490 500 510 520
>>CCDS12787.1 IL4I1 gene_id:259307|Hs108|chr19 (567 aa)
initn: 331 init1: 189 opt: 356 Z-score: 437.2 bits: 90.7 E(32554): 4.9e-18
Smith-Waterman score: 365; 25.3% identity (52.7% similar) in 490 aa overlap (16-468:62-513)
10 20 30 40
pF1KE4 MENQEKASIAGHMFDVVVIGGGISGLSAAKLLTEYGVSVLVLEAR
:.:.:.:..:: :::.:.. : .: .:::
CCDS12 PFEKCMQDPDYEQLLKVVTWGLNRTLKPQRVIVVGAGVAGLVAAKVLSDAGHKVTILEAD
40 50 60 70 80 90
50 60 70 80 90 100
pF1KE4 DRVGGRTYTIRNEHVDYVDVGGAYVGPTQNRIL-RLSKELGIETYKVNVSERLVQYVKGK
.:.::: .: :.... .. ::. :...::: .: . ::. :.. ...:: :.
CCDS12 NRIGGRIFTYRDQNTGWIGELGAMRMPSSHRILHKLCQGLGL-----NLT-KFTQYDKN-
100 110 120 130 140
110 120 130 140 150
pF1KE4 TYPFRGAFPPVWNPIAYLDYNN--LWRTIDNMGKEIPTDAPWEAQHA--DKWD---KMTM
.:. . . : . .. ...: . : : :. : .. ....
CCDS12 ----------TWTEVHEVKLRNYVVEKVPEKLGYAL---RPQEKGHSPEDIYQMALNQAL
150 160 170 180 190
160 170 180 190 200
pF1KE4 KELIDKICWTKTARRFA------YLFVNINVTSEPHEVSALWFLWYVKQCGG--------
:.: : :. ..: ::. . :. :.: :. .: : . :
CCDS12 KDLKALGC-RKAMKKFERHTLLEYLLGEGNL-SRP----AVQLLGDVMSEDGFFYLSFAE
200 210 220 230 240
210 220 230 240 250 260
pF1KE4 TTRIFS-VTNGGQERKFVGGSGQVSERIMDLLGDQVKLNHPVTHVDQSSDNIIIETLNHE
. : : ... : ..::: . . ... :. : :: ::. . :. .. .. .
CCDS12 ALRAHSCLSDRLQYSRIVGGWDLLPRALLSSLSGLVLLNAPVVAMTQGPHDVHVQIETSP
250 260 270 280 290 300
270 280 290 300 310
pF1KE4 HYECKYVINAIPPTLTA------KIHFRPELPAERNQLIQRLPMGAVIKCMMYYKEAFWK
. :..: ::: .: : : :: . .. ..:: . . : .. ... ::.
CCDS12 PARNLKVLKADVVLLTASGPAVKRITFSPPLPRHMQEALRRLHYVPATKVFLSFRRPFWR
310 320 330 340 350 360
320 330 340 350 360 370
pF1KE4 KKDYCGCMIIEDEDAPISITLDDTKPDGSLPAIMGFILARKADRLAKLHKEIRKKKICEL
.. : . : : . . .:.: . .. . : .: : .: :
CCDS12 EEHIEGGH--SNTDRPSRMIFYPPPREGAL-LLASYTWSDAAAAFAGLSRE-------EA
370 380 390 400 410
380 390 400 410 420
pF1KE4 YAKVLGSQEALH-PVHYEE-------KNWCEEQYSGGCYTAYFPPGIMTQYGRVIRQPVG
.: . ::: :: . : : :.:.: : ... ::.. : :
CCDS12 LRLALDDVAALHGPVVRQLWDGTGVVKRWAEDQHSQGGFVVQ-PPALWQTEKDDWTVPYG
420 430 440 450 460 470
430 440 450 460 470 480
pF1KE4 RIFFAGTETATKWSGYMEGAVEAGERAAREVLNGLGKVTEKDIWVQEPESKDVPAVEITH
::.::: .:: :..: ::... ::: .. . : ...
CCDS12 RIYFAGEHTAYP-HGWVETAVKSALRAAIKINSRKGPASDTASPEGHASDMEGQGHVHGV
480 490 500 510 520 530
490 500 510 520
pF1KE4 TFWERNLPSVSGLLKIIGFSTSVTALGFVLYKYKLLPRS
CCDS12 ASSPSHDLAKEEGSHPPVQGQLSLQNTTHTRTSH
540 550 560
>>CCDS12786.1 IL4I1 gene_id:259307|Hs108|chr19 (589 aa)
initn: 331 init1: 189 opt: 356 Z-score: 437.0 bits: 90.7 E(32554): 5.1e-18
Smith-Waterman score: 365; 25.3% identity (52.7% similar) in 490 aa overlap (16-468:84-535)
10 20 30 40
pF1KE4 MENQEKASIAGHMFDVVVIGGGISGLSAAKLLTEYGVSVLVLEAR
:.:.:.:..:: :::.:.. : .: .:::
CCDS12 PFEKCMQDPDYEQLLKVVTWGLNRTLKPQRVIVVGAGVAGLVAAKVLSDAGHKVTILEAD
60 70 80 90 100 110
50 60 70 80 90 100
pF1KE4 DRVGGRTYTIRNEHVDYVDVGGAYVGPTQNRIL-RLSKELGIETYKVNVSERLVQYVKGK
.:.::: .: :.... .. ::. :...::: .: . ::. :.. ...:: :.
CCDS12 NRIGGRIFTYRDQNTGWIGELGAMRMPSSHRILHKLCQGLGL-----NLT-KFTQYDKN-
120 130 140 150 160
110 120 130 140 150
pF1KE4 TYPFRGAFPPVWNPIAYLDYNN--LWRTIDNMGKEIPTDAPWEAQHA--DKWD---KMTM
.:. . . : . .. ...: . : : :. : .. ....
CCDS12 ----------TWTEVHEVKLRNYVVEKVPEKLGYAL---RPQEKGHSPEDIYQMALNQAL
170 180 190 200 210
160 170 180 190 200
pF1KE4 KELIDKICWTKTARRFA------YLFVNINVTSEPHEVSALWFLWYVKQCGG--------
:.: : :. ..: ::. . :. :.: :. .: : . :
CCDS12 KDLKALGC-RKAMKKFERHTLLEYLLGEGNL-SRP----AVQLLGDVMSEDGFFYLSFAE
220 230 240 250 260
210 220 230 240 250 260
pF1KE4 TTRIFS-VTNGGQERKFVGGSGQVSERIMDLLGDQVKLNHPVTHVDQSSDNIIIETLNHE
. : : ... : ..::: . . ... :. : :: ::. . :. .. .. .
CCDS12 ALRAHSCLSDRLQYSRIVGGWDLLPRALLSSLSGLVLLNAPVVAMTQGPHDVHVQIETSP
270 280 290 300 310 320
270 280 290 300 310
pF1KE4 HYECKYVINAIPPTLTA------KIHFRPELPAERNQLIQRLPMGAVIKCMMYYKEAFWK
. :..: ::: .: : : :: . .. ..:: . . : .. ... ::.
CCDS12 PARNLKVLKADVVLLTASGPAVKRITFSPPLPRHMQEALRRLHYVPATKVFLSFRRPFWR
330 340 350 360 370 380
320 330 340 350 360 370
pF1KE4 KKDYCGCMIIEDEDAPISITLDDTKPDGSLPAIMGFILARKADRLAKLHKEIRKKKICEL
.. : . : : . . .:.: . .. . : .: : .: :
CCDS12 EEHIEGGH--SNTDRPSRMIFYPPPREGAL-LLASYTWSDAAAAFAGLSRE-------EA
390 400 410 420 430
380 390 400 410 420
pF1KE4 YAKVLGSQEALH-PVHYEE-------KNWCEEQYSGGCYTAYFPPGIMTQYGRVIRQPVG
.: . ::: :: . : : :.:.: : ... ::.. : :
CCDS12 LRLALDDVAALHGPVVRQLWDGTGVVKRWAEDQHSQGGFVVQ-PPALWQTEKDDWTVPYG
440 450 460 470 480 490
430 440 450 460 470 480
pF1KE4 RIFFAGTETATKWSGYMEGAVEAGERAAREVLNGLGKVTEKDIWVQEPESKDVPAVEITH
::.::: .:: :..: ::... ::: .. . : ...
CCDS12 RIYFAGEHTAYP-HGWVETAVKSALRAAIKINSRKGPASDTASPEGHASDMEGQGHVHGV
500 510 520 530 540 550
490 500 510 520
pF1KE4 TFWERNLPSVSGLLKIIGFSTSVTALGFVLYKYKLLPRS
CCDS12 ASSPSHDLAKEEGSHPPVQGQLSLQNTTHTRTSH
560 570 580
527 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 00:25:17 2016 done: Sun Nov 6 00:25:18 2016
Total Scan time: 3.020 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]