Result of FASTA (omim) for
pFN21AE4480
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4480, 497 aa
1>>>pF1KE4480 497 - 497 aa - 497 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9562+/-0.000358; mu= 19.9589+/- 0.022
mean_var=64.9095+/-12.714, 0's: 0 Z-trim(113.5): 151 B-trim: 0 in 0/52
Lambda= 0.159192
statistics sampled from 22673 (22832) to 22673 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.643), E-opt: 0.2 (0.268), width: 16
Scan time: 9.090
The best scores are: opt bits E(85289)
NP_001159532 (OMIM: 138492,614619) glycine recepto ( 497) 3313 769.9 0
NP_000815 (OMIM: 138492,614619) glycine receptor s ( 497) 3313 769.9 0
XP_016863523 (OMIM: 138492,614619) PREDICTED: glyc ( 399) 2690 626.7 3.7e-179
XP_016863524 (OMIM: 138492,614619) PREDICTED: glyc ( 303) 2030 475.1 1.3e-133
NP_001159533 (OMIM: 138492,614619) glycine recepto ( 303) 2030 475.1 1.3e-133
NP_001112358 (OMIM: 305990) glycine receptor subun ( 452) 1221 289.4 1.5e-77
XP_016884916 (OMIM: 305990) PREDICTED: glycine rec ( 452) 1221 289.4 1.5e-77
XP_011543798 (OMIM: 305990) PREDICTED: glycine rec ( 436) 1220 289.1 1.7e-77
XP_011543797 (OMIM: 305990) PREDICTED: glycine rec ( 436) 1220 289.1 1.7e-77
XP_006724550 (OMIM: 305990) PREDICTED: glycine rec ( 436) 1220 289.1 1.7e-77
NP_001112357 (OMIM: 305990) glycine receptor subun ( 452) 1220 289.2 1.7e-77
NP_002054 (OMIM: 305990) glycine receptor subunit ( 452) 1220 289.2 1.7e-77
NP_006520 (OMIM: 600421) glycine receptor subunit ( 464) 1218 288.7 2.4e-77
NP_001036008 (OMIM: 600421) glycine receptor subun ( 449) 1216 288.2 3.2e-77
XP_016864119 (OMIM: 600421) PREDICTED: glycine rec ( 424) 1213 287.5 5e-77
NP_000162 (OMIM: 138491,149400) glycine receptor s ( 449) 1170 277.7 4.9e-74
XP_016864838 (OMIM: 138491,149400) PREDICTED: glyc ( 465) 1170 277.7 5e-74
NP_001139512 (OMIM: 138491,149400) glycine recepto ( 457) 1163 276.1 1.5e-73
XP_011530569 (OMIM: 600421) PREDICTED: glycine rec ( 313) 1084 257.8 3.3e-68
XP_016884917 (OMIM: 305990) PREDICTED: glycine rec ( 363) 1040 247.8 4e-65
XP_016884918 (OMIM: 305990) PREDICTED: glycine rec ( 363) 1040 247.8 4e-65
NP_001165413 (OMIM: 305990) glycine receptor subun ( 363) 1040 247.8 4e-65
NP_001278929 (OMIM: 138491,149400) glycine recepto ( 366) 991 236.5 9.9e-62
NP_000803 (OMIM: 137190,617153) gamma-aminobutyric ( 474) 957 228.8 2.7e-59
NP_000805 (OMIM: 137192,612269,617113) gamma-amino ( 473) 916 219.4 1.9e-56
NP_068712 (OMIM: 137192,612269,617113) gamma-amino ( 473) 914 218.9 2.6e-56
NP_000804 (OMIM: 600232) gamma-aminobutyric acid r ( 474) 894 214.3 6.2e-55
NP_068711 (OMIM: 600232) gamma-aminobutyric acid r ( 512) 822 197.8 6.2e-50
NP_002033 (OMIM: 137161) gamma-aminobutyric acid r ( 479) 820 197.3 8.1e-50
XP_011519730 (OMIM: 137192,612269,617113) PREDICTE ( 414) 817 196.6 1.2e-49
NP_001243632 (OMIM: 137161) gamma-aminobutyric aci ( 462) 816 196.4 1.5e-49
NP_001178250 (OMIM: 137192,612269,617113) gamma-am ( 402) 808 194.5 4.8e-49
NP_001254511 (OMIM: 137161) gamma-aminobutyric aci ( 392) 794 191.3 4.4e-48
XP_016866178 (OMIM: 137161) PREDICTED: gamma-amino ( 392) 794 191.3 4.4e-48
NP_001243633 (OMIM: 137161) gamma-aminobutyric aci ( 392) 794 191.3 4.4e-48
NP_002034 (OMIM: 137162) gamma-aminobutyric acid r ( 465) 792 190.9 6.9e-48
NP_001178249 (OMIM: 137192,612269,617113) gamma-am ( 388) 788 189.9 1.1e-47
NP_001265560 (OMIM: 137192,612269,617113) gamma-am ( 388) 788 189.9 1.1e-47
XP_011529486 (OMIM: 300349) PREDICTED: gamma-amino ( 406) 778 187.6 5.7e-47
NP_061028 (OMIM: 300349) gamma-aminobutyric acid r ( 632) 776 187.3 1.1e-46
XP_011534015 (OMIM: 137162) PREDICTED: gamma-amino ( 421) 759 183.3 1.2e-45
NP_055026 (OMIM: 602729) gamma-aminobutyric acid r ( 440) 737 178.2 4.2e-44
NP_000806 (OMIM: 137163,613060) gamma-aminobutyric ( 452) 728 176.2 1.8e-43
XP_011539496 (OMIM: 137163,613060) PREDICTED: gamm ( 465) 728 176.2 1.8e-43
NP_000807 (OMIM: 137164,607681,611277) gamma-amino ( 467) 728 176.2 1.8e-43
NP_944494 (OMIM: 137164,607681,611277) gamma-amino ( 475) 728 176.2 1.9e-43
NP_001317619 (OMIM: 103780,137140) gamma-aminobuty ( 511) 728 176.2 2e-43
XP_011511977 (OMIM: 103780,137140) PREDICTED: gamm ( 511) 728 176.2 2e-43
XP_016856425 (OMIM: 137163,613060) PREDICTED: gamm ( 687) 728 176.3 2.5e-43
NP_000798 (OMIM: 103780,137140) gamma-aminobutyric ( 451) 725 175.5 2.9e-43
>>NP_001159532 (OMIM: 138492,614619) glycine receptor su (497 aa)
initn: 3313 init1: 3313 opt: 3313 Z-score: 4109.4 bits: 769.9 E(85289): 0
Smith-Waterman score: 3313; 100.0% identity (100.0% similar) in 497 aa overlap (1-497:1-497)
10 20 30 40 50 60
pF1KE4 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 GNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 LGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 EAEKARIAKAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSDLRSNDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAEKARIAKAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSDLRSNDF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 SIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARAL
430 440 450 460 470 480
490
pF1KE4 FPFCFLFFNVIYWSIYL
:::::::::::::::::
NP_001 FPFCFLFFNVIYWSIYL
490
>>NP_000815 (OMIM: 138492,614619) glycine receptor subun (497 aa)
initn: 3313 init1: 3313 opt: 3313 Z-score: 4109.4 bits: 769.9 E(85289): 0
Smith-Waterman score: 3313; 100.0% identity (100.0% similar) in 497 aa overlap (1-497:1-497)
10 20 30 40 50 60
pF1KE4 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 GNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 LGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 EAEKARIAKAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSDLRSNDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 EAEKARIAKAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSDLRSNDF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 SIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARAL
430 440 450 460 470 480
490
pF1KE4 FPFCFLFFNVIYWSIYL
:::::::::::::::::
NP_000 FPFCFLFFNVIYWSIYL
490
>>XP_016863523 (OMIM: 138492,614619) PREDICTED: glycine (399 aa)
initn: 2690 init1: 2690 opt: 2690 Z-score: 3337.5 bits: 626.7 E(85289): 3.7e-179
Smith-Waterman score: 2690; 100.0% identity (100.0% similar) in 399 aa overlap (99-497:1-399)
70 80 90 100 110 120
pF1KE4 PRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPSDFRGSDAL
::::::::::::::::::::::::::::::
XP_016 MDYRVNIFLRQKWNDPRLKLPSDFRGSDAL
10 20 30
130 140 150 160 170 180
pF1KE4 TVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSITLSCPLDLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSITLSCPLDLT
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE4 LFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEYGNCTKYYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEYGNCTKYYK
100 110 120 130 140 150
250 260 270 280 290 300
pF1KE4 GTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLS
160 170 180 190 200 210
310 320 330 340 350 360
pF1KE4 LASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRVEAEKARIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRVEAEKARIA
220 230 240 250 260 270
370 380 390 400 410 420
pF1KE4 KAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSDLRSNDFSIVGSLPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSDLRSNDFSIVGSLPR
280 290 300 310 320 330
430 440 450 460 470 480
pF1KE4 DFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARALFPFCFLFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARALFPFCFLFF
340 350 360 370 380 390
490
pF1KE4 NVIYWSIYL
:::::::::
XP_016 NVIYWSIYL
>>XP_016863524 (OMIM: 138492,614619) PREDICTED: glycine (303 aa)
initn: 2030 init1: 2030 opt: 2030 Z-score: 2520.0 bits: 475.1 E(85289): 1.3e-133
Smith-Waterman score: 2030; 100.0% identity (100.0% similar) in 302 aa overlap (1-302:1-302)
10 20 30 40 50 60
pF1KE4 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 GNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 LGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRV
::
XP_016 LGW
>>NP_001159533 (OMIM: 138492,614619) glycine receptor su (303 aa)
initn: 2030 init1: 2030 opt: 2030 Z-score: 2520.0 bits: 475.1 E(85289): 1.3e-133
Smith-Waterman score: 2030; 100.0% identity (100.0% similar) in 302 aa overlap (1-302:1-302)
10 20 30 40 50 60
pF1KE4 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 GNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 LGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRV
::
NP_001 LGW
>>NP_001112358 (OMIM: 305990) glycine receptor subunit a (452 aa)
initn: 1262 init1: 479 opt: 1221 Z-score: 1513.4 bits: 289.4 E(85289): 1.5e-77
Smith-Waterman score: 1267; 45.7% identity (66.1% similar) in 495 aa overlap (4-496:8-441)
10 20 30 40 50
pF1KE4 MKFLLTTAF-LILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANS
.::. : ..: . . :. :...:..:: ::: . :..
NP_001 MNRQLVNILTALFAFFLETNHFRTAFCKDHDSRSGKQ-------PSQTLS------PSDF
10 20 30 40
60 70 80 90 100 110
pF1KE4 TSNILNRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPR
.....: .:: :::::::: ::.:. :::::::::: ::::::::::::::.::: :
NP_001 LDKLMGRT-SGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE4 LKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSM
: :.. .:.: .::.: .:::::::::::.::::::: .: :: : ..: :: :.
NP_001 LAY-SEY-PDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE4 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK
::..:::::.:: ::::.: : ::::::::: .:: : : : :::. : ..:::: :
NP_001 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF-IL
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE4 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA
::. : : :::.:. :: .::.:: : :.::.:.:.. .: :.::::.:::.::::: ::
NP_001 KEEKELGYCTKHYN-TGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDA
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE4 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVML
. ::: ::: .::..... . : :::::::::.:.:. .:::: ::.:.:::.:
NP_001 APARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAV----
290 300 310 320 330
360 370 380 390 400 410
pF1KE4 NNPKRVEAEKARIAKAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSD
: .: . : :. . .. ..: .:.... : .: : .: .:
NP_001 NFVSRQHKEFLRLRRRQKRQNKEEDVTRESRFNFSG---------YGMGHCLQV------
340 350 360 370 380
420 430 440 450 460 470
pF1KE4 LRSNDFSIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRID
.: . : . : . :. . : : . :::::
NP_001 ---KDGTAVKATPAN-----------PLP----------QPPKDGDAIKKKFVDRAKRID
390 400 410
480 490
pF1KE4 LYARALFPFCFLFFNVIYWSIYL
.:: ::. ::.::..:: :
NP_001 TISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
420 430 440 450
>>XP_016884916 (OMIM: 305990) PREDICTED: glycine recepto (452 aa)
initn: 1262 init1: 479 opt: 1221 Z-score: 1513.4 bits: 289.4 E(85289): 1.5e-77
Smith-Waterman score: 1267; 45.7% identity (66.1% similar) in 495 aa overlap (4-496:8-441)
10 20 30 40 50
pF1KE4 MKFLLTTAF-LILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANS
.::. : ..: . . :. :...:..:: ::: . :..
XP_016 MNRQLVNILTALFAFFLETNHFRTAFCKDHDSRSGKQ-------PSQTLS------PSDF
10 20 30 40
60 70 80 90 100 110
pF1KE4 TSNILNRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPR
.....: .:: :::::::: ::.:. :::::::::: ::::::::::::::.::: :
XP_016 LDKLMGRT-SGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE4 LKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSM
: :.. .:.: .::.: .:::::::::::.::::::: .: :: : ..: :: :.
XP_016 LAY-SEY-PDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE4 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK
::..:::::.:: ::::.: : ::::::::: .:: : : : :::. : ..:::: :
XP_016 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF-IL
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE4 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA
::. : : :::.:. :: .::.:: : :.::.:.:.. .: :.::::.:::.::::: ::
XP_016 KEEKELGYCTKHYN-TGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDA
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE4 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVML
. ::: ::: .::..... . : :::::::::.:.:. .:::: ::.:.:::.:
XP_016 APARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAV----
290 300 310 320 330
360 370 380 390 400 410
pF1KE4 NNPKRVEAEKARIAKAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSD
: .: . : :. . .. ..: .:.... : .: : .: .:
XP_016 NFVSRQHKEFLRLRRRQKRQNKEEDVTRESRFNFSG---------YGMGHCLQV------
340 350 360 370 380
420 430 440 450 460 470
pF1KE4 LRSNDFSIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRID
.: . : . : . :. . : : . :::::
XP_016 ---KDGTAVKATPAN-----------PLP----------QPPKDGDAIKKKFVDRAKRID
390 400 410
480 490
pF1KE4 LYARALFPFCFLFFNVIYWSIYL
.:: ::. ::.::..:: :
XP_016 TISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
420 430 440 450
>>XP_011543798 (OMIM: 305990) PREDICTED: glycine recepto (436 aa)
initn: 1261 init1: 479 opt: 1220 Z-score: 1512.4 bits: 289.1 E(85289): 1.7e-77
Smith-Waterman score: 1265; 46.0% identity (66.5% similar) in 478 aa overlap (20-496:9-425)
10 20 30 40 50 60
pF1KE4 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL
:. :...:..:: ::: . :.. ....
XP_011 MNLHMRMTAFCKDHDSRSGKQ-------PSQTLS------PSDFLDKLM
10 20 30
70 80 90 100 110 120
pF1KE4 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS
.: .:: :::::::: ::.:. :::::::::. ::::::::::::::.::: :: :
XP_011 GRT-SGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAY-S
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE4 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT
.. .:.: .::.: .:::::::::::.::::::: .: :: : ..: :: :.::..:
XP_011 EY-PDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLT
100 110 120 130 140 150
190 200 210 220 230
pF1KE4 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIKKEDIE
::::.:: ::::.: : ::::::::: .:: : : : :::. : ..:::: : ::. :
XP_011 LSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF-ILKEEKE
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE4 YGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARV
: :::.:. :: .::.:: : :.::.:.:.. .: :.::::.:::.::::: ::. :::
XP_011 LGYCTKHYN-TGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARV
220 230 240 250 260 270
300 310 320 330 340 350
pF1KE4 PLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKR
::: .::..... . : :::::::::.:.:. .:::: ::.:.:::.:. . .:
XP_011 ALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFV----SR
280 290 300 310 320
360 370 380 390 400 410
pF1KE4 VEAEKARIAKAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSDLRSND
. : :. . .. ..: .:.... : .: : .: .: .:
XP_011 QHKEFLRLRRRQKRQNKEEDVTRESRFNFSG---------YGMGHCLQV---------KD
330 340 350 360
420 430 440 450 460 470
pF1KE4 FSIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARA
. : . : . :. . : : . ::::: .::
XP_011 GTAVKATPAN-----------PLP----------QPPKDGDAIKKKFVDRAKRIDTISRA
370 380 390 400
480 490
pF1KE4 LFPFCFLFFNVIYWSIYL
::. ::.::..:: :
XP_011 AFPLAFLIFNIFYWITYKIIRHEDVHKK
410 420 430
>>XP_011543797 (OMIM: 305990) PREDICTED: glycine recepto (436 aa)
initn: 1261 init1: 479 opt: 1220 Z-score: 1512.4 bits: 289.1 E(85289): 1.7e-77
Smith-Waterman score: 1265; 46.0% identity (66.5% similar) in 478 aa overlap (20-496:9-425)
10 20 30 40 50 60
pF1KE4 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL
:. :...:..:: ::: . :.. ....
XP_011 MNLHMRMTAFCKDHDSRSGKQ-------PSQTLS------PSDFLDKLM
10 20 30
70 80 90 100 110 120
pF1KE4 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS
.: .:: :::::::: ::.:. :::::::::. ::::::::::::::.::: :: :
XP_011 GRT-SGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAY-S
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE4 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT
.. .:.: .::.: .:::::::::::.::::::: .: :: : ..: :: :.::..:
XP_011 EY-PDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLT
100 110 120 130 140 150
190 200 210 220 230
pF1KE4 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIKKEDIE
::::.:: ::::.: : ::::::::: .:: : : : :::. : ..:::: : ::. :
XP_011 LSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF-ILKEEKE
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE4 YGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARV
: :::.:. :: .::.:: : :.::.:.:.. .: :.::::.:::.::::: ::. :::
XP_011 LGYCTKHYN-TGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARV
220 230 240 250 260 270
300 310 320 330 340 350
pF1KE4 PLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKR
::: .::..... . : :::::::::.:.:. .:::: ::.:.:::.:. . .:
XP_011 ALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFV----SR
280 290 300 310 320
360 370 380 390 400 410
pF1KE4 VEAEKARIAKAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSDLRSND
. : :. . .. ..: .:.... : .: : .: .: .:
XP_011 QHKEFLRLRRRQKRQNKEEDVTRESRFNFSG---------YGMGHCLQV---------KD
330 340 350 360
420 430 440 450 460 470
pF1KE4 FSIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARA
. : . : . :. . : : . ::::: .::
XP_011 GTAVKATPAN-----------PLP----------QPPKDGDAIKKKFVDRAKRIDTISRA
370 380 390 400
480 490
pF1KE4 LFPFCFLFFNVIYWSIYL
::. ::.::..:: :
XP_011 AFPLAFLIFNIFYWITYKIIRHEDVHKK
410 420 430
>>XP_006724550 (OMIM: 305990) PREDICTED: glycine recepto (436 aa)
initn: 1261 init1: 479 opt: 1220 Z-score: 1512.4 bits: 289.1 E(85289): 1.7e-77
Smith-Waterman score: 1265; 46.0% identity (66.5% similar) in 478 aa overlap (20-496:9-425)
10 20 30 40 50 60
pF1KE4 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL
:. :...:..:: ::: . :.. ....
XP_006 MNLHMRMTAFCKDHDSRSGKQ-------PSQTLS------PSDFLDKLM
10 20 30
70 80 90 100 110 120
pF1KE4 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS
.: .:: :::::::: ::.:. :::::::::. ::::::::::::::.::: :: :
XP_006 GRT-SGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAY-S
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE4 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT
.. .:.: .::.: .:::::::::::.::::::: .: :: : ..: :: :.::..:
XP_006 EY-PDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLT
100 110 120 130 140 150
190 200 210 220 230
pF1KE4 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIKKEDIE
::::.:: ::::.: : ::::::::: .:: : : : :::. : ..:::: : ::. :
XP_006 LSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF-ILKEEKE
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE4 YGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARV
: :::.:. :: .::.:: : :.::.:.:.. .: :.::::.:::.::::: ::. :::
XP_006 LGYCTKHYN-TGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARV
220 230 240 250 260 270
300 310 320 330 340 350
pF1KE4 PLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKR
::: .::..... . : :::::::::.:.:. .:::: ::.:.:::.:. . .:
XP_006 ALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFV----SR
280 290 300 310 320
360 370 380 390 400 410
pF1KE4 VEAEKARIAKAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSDLRSND
. : :. . .. ..: .:.... : .: : .: .: .:
XP_006 QHKEFLRLRRRQKRQNKEEDVTRESRFNFSG---------YGMGHCLQV---------KD
330 340 350 360
420 430 440 450 460 470
pF1KE4 FSIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARA
. : . : . :. . : : . ::::: .::
XP_006 GTAVKATPAN-----------PLP----------QPPKDGDAIKKKFVDRAKRIDTISRA
370 380 390 400
480 490
pF1KE4 LFPFCFLFFNVIYWSIYL
::. ::.::..:: :
XP_006 AFPLAFLIFNIFYWITYKIIRHEDVHKK
410 420 430
497 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 00:52:16 2016 done: Sun Nov 6 00:52:18 2016
Total Scan time: 9.090 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]