Result of FASTA (omim) for
pFN21AE4407
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4407, 421 aa
1>>>pF1KE4407 421 - 421 aa - 421 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6137+/-0.00038; mu= 15.6133+/- 0.024
mean_var=76.2350+/-15.235, 0's: 0 Z-trim(113.8): 30 B-trim: 610 in 1/54
Lambda= 0.146892
statistics sampled from 23239 (23257) to 23239 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.651), E-opt: 0.2 (0.273), width: 16
Scan time: 9.290
The best scores are: opt bits E(85289)
NP_149124 (OMIM: 123830) 2',3'-cyclic-nucleotide 3 ( 421) 2803 603.7 2.9e-172
NP_001317145 (OMIM: 123830) 2',3'-cyclic-nucleotid ( 401) 2665 574.4 1.8e-163
XP_011522642 (OMIM: 123830) PREDICTED: 2',3'-cycli ( 401) 2665 574.4 1.8e-163
XP_011533176 (OMIM: 615788) PREDICTED: NEDD4-bindi ( 570) 203 52.7 2.7e-06
XP_016875837 (OMIM: 615788) PREDICTED: NEDD4-bindi ( 583) 203 52.7 2.8e-06
XP_016875838 (OMIM: 615788) PREDICTED: NEDD4-bindi ( 583) 203 52.7 2.8e-06
NP_055702 (OMIM: 615788) NEDD4-binding protein 2-l ( 583) 203 52.7 2.8e-06
XP_016875836 (OMIM: 615788) PREDICTED: NEDD4-bindi ( 583) 203 52.7 2.8e-06
XP_016875831 (OMIM: 615788) PREDICTED: NEDD4-bindi ( 600) 203 52.8 2.8e-06
XP_016875818 (OMIM: 615788) PREDICTED: NEDD4-bindi (1181) 203 52.9 5e-06
NP_001307765 (OMIM: 615788) NEDD4-binding protein (1181) 203 52.9 5e-06
XP_016875817 (OMIM: 615788) PREDICTED: NEDD4-bindi (1181) 203 52.9 5e-06
XP_016875819 (OMIM: 615788) PREDICTED: NEDD4-bindi (1181) 203 52.9 5e-06
XP_016875814 (OMIM: 615788) PREDICTED: NEDD4-bindi (1193) 203 52.9 5e-06
XP_016875816 (OMIM: 615788) PREDICTED: NEDD4-bindi (1193) 203 52.9 5e-06
XP_016875813 (OMIM: 615788) PREDICTED: NEDD4-bindi (1193) 203 52.9 5e-06
XP_016875815 (OMIM: 615788) PREDICTED: NEDD4-bindi (1193) 203 52.9 5e-06
>>NP_149124 (OMIM: 123830) 2',3'-cyclic-nucleotide 3'-ph (421 aa)
initn: 2803 init1: 2803 opt: 2803 Z-score: 3213.7 bits: 603.7 E(85289): 2.9e-172
Smith-Waterman score: 2803; 100.0% identity (100.0% similar) in 421 aa overlap (1-421:1-421)
10 20 30 40 50 60
pF1KE4 MNRGFSRKSHTFLPKIFFRKMSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 MNRGFSRKSHTFLPKIFFRKMSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 SGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEEYKRLDEDLAAYCRRRDIRILV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 SGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEEYKRLDEDLAAYCRRRDIRILV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 LDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 LDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 LEKDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 LEKDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 YFGKRPPGVLHCTTKFCDYGKAPGAEEYAQQDVLKKSYSKAFTLTISALFVTPKTTGARV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 YFGKRPPGVLHCTTKFCDYGKAPGAEEYAQQDVLKKSYSKAFTLTISALFVTPKTTGARV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 ELSEQQLQLWPSDVDKLSPTDNLPRGSRAHITLGCAADVEAVQTGLDLLEILRQEKGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 ELSEQQLQLWPSDVDKLSPTDNLPRGSRAHITLGCAADVEAVQTGLDLLEILRQEKGGSR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 GEEVGELSRGKLYSLGNGRWMLTLAKNMEVRAIFTGYYGKGKPVPTQGSRKGGALQSCTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_149 GEEVGELSRGKLYSLGNGRWMLTLAKNMEVRAIFTGYYGKGKPVPTQGSRKGGALQSCTI
370 380 390 400 410 420
pF1KE4 I
:
NP_149 I
>>NP_001317145 (OMIM: 123830) 2',3'-cyclic-nucleotide 3' (401 aa)
initn: 2665 init1: 2665 opt: 2665 Z-score: 3056.0 bits: 574.4 E(85289): 1.8e-163
Smith-Waterman score: 2665; 100.0% identity (100.0% similar) in 401 aa overlap (21-421:1-401)
10 20 30 40 50 60
pF1KE4 MNRGFSRKSHTFLPKIFFRKMSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPG
::::::::::::::::::::::::::::::::::::::::
NP_001 MSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPG
10 20 30 40
70 80 90 100 110 120
pF1KE4 SGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEEYKRLDEDLAAYCRRRDIRILV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEEYKRLDEDLAAYCRRRDIRILV
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 LDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPG
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE4 LEKDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEKDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVT
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE4 YFGKRPPGVLHCTTKFCDYGKAPGAEEYAQQDVLKKSYSKAFTLTISALFVTPKTTGARV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YFGKRPPGVLHCTTKFCDYGKAPGAEEYAQQDVLKKSYSKAFTLTISALFVTPKTTGARV
230 240 250 260 270 280
310 320 330 340 350 360
pF1KE4 ELSEQQLQLWPSDVDKLSPTDNLPRGSRAHITLGCAADVEAVQTGLDLLEILRQEKGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELSEQQLQLWPSDVDKLSPTDNLPRGSRAHITLGCAADVEAVQTGLDLLEILRQEKGGSR
290 300 310 320 330 340
370 380 390 400 410 420
pF1KE4 GEEVGELSRGKLYSLGNGRWMLTLAKNMEVRAIFTGYYGKGKPVPTQGSRKGGALQSCTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEEVGELSRGKLYSLGNGRWMLTLAKNMEVRAIFTGYYGKGKPVPTQGSRKGGALQSCTI
350 360 370 380 390 400
pF1KE4 I
:
NP_001 I
>>XP_011522642 (OMIM: 123830) PREDICTED: 2',3'-cyclic-nu (401 aa)
initn: 2665 init1: 2665 opt: 2665 Z-score: 3056.0 bits: 574.4 E(85289): 1.8e-163
Smith-Waterman score: 2665; 100.0% identity (100.0% similar) in 401 aa overlap (21-421:1-401)
10 20 30 40 50 60
pF1KE4 MNRGFSRKSHTFLPKIFFRKMSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPG
::::::::::::::::::::::::::::::::::::::::
XP_011 MSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPG
10 20 30 40
70 80 90 100 110 120
pF1KE4 SGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEEYKRLDEDLAAYCRRRDIRILV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEEYKRLDEDLAAYCRRRDIRILV
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 LDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPG
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE4 LEKDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LEKDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVT
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE4 YFGKRPPGVLHCTTKFCDYGKAPGAEEYAQQDVLKKSYSKAFTLTISALFVTPKTTGARV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YFGKRPPGVLHCTTKFCDYGKAPGAEEYAQQDVLKKSYSKAFTLTISALFVTPKTTGARV
230 240 250 260 270 280
310 320 330 340 350 360
pF1KE4 ELSEQQLQLWPSDVDKLSPTDNLPRGSRAHITLGCAADVEAVQTGLDLLEILRQEKGGSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELSEQQLQLWPSDVDKLSPTDNLPRGSRAHITLGCAADVEAVQTGLDLLEILRQEKGGSR
290 300 310 320 330 340
370 380 390 400 410 420
pF1KE4 GEEVGELSRGKLYSLGNGRWMLTLAKNMEVRAIFTGYYGKGKPVPTQGSRKGGALQSCTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEEVGELSRGKLYSLGNGRWMLTLAKNMEVRAIFTGYYGKGKPVPTQGSRKGGALQSCTI
350 360 370 380 390 400
pF1KE4 I
:
XP_011 I
>>XP_011533176 (OMIM: 615788) PREDICTED: NEDD4-binding p (570 aa)
initn: 123 init1: 123 opt: 203 Z-score: 233.9 bits: 52.7 E(85289): 2.7e-06
Smith-Waterman score: 203; 27.7% identity (60.8% similar) in 130 aa overlap (50-177:402-531)
20 30 40 50 60 70
pF1KE4 KMSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPGSGKSTLARVIVDKYRDGTK
: :..:::::::::.::.:... . :::
XP_011 CWKDHCMDKHNGTDRFVNQQFQEEKLNKLQKLLILLRGLPGSGKTTLSRILLGQNRDGIV
380 390 400 410 420 430
80 90 100 110 120 130
pF1KE4 MVSADAYKITPGARGAFSE--EYKRLDEDLAAYCRRRDIRILVLDDTNHERERLEQLFEM
. . : .. : : .. . . ... : . ...:.:: . ... :.
XP_011 FSTDDYFHHQDGYRYNVNQLGDAHDWNQNRAKQAIDQGRSPVIIDNTNIQAWEMKPYVEV
440 450 460 470 480 490
140 150 160 170 180 190
pF1KE4 ADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPGLEKDFLPLYFGWFLTKK
: :.: . ::.: :..: .:...:. .: . ..
XP_011 AIGKGYRVEFHEPETWWKFDPEELEKRNKHGVSRKKIAQMLDRYEYQMSISIVMNSVEPS
500 510 520 530 540 550
200 210 220 230 240 250
pF1KE4 SSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVTYFGKRPPGVLHCTTKFC
XP_011 HKSTQRPPPPQGRQRMVHI
560 570
>>XP_016875837 (OMIM: 615788) PREDICTED: NEDD4-binding p (583 aa)
initn: 146 init1: 123 opt: 203 Z-score: 233.8 bits: 52.7 E(85289): 2.8e-06
Smith-Waterman score: 203; 27.7% identity (60.8% similar) in 130 aa overlap (50-177:402-531)
20 30 40 50 60 70
pF1KE4 KMSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPGSGKSTLARVIVDKYRDGTK
: :..:::::::::.::.:... . :::
XP_016 CWKDHCMDKHNGTDRFVNQQFQEEKLNKLQKLLILLRGLPGSGKTTLSRILLGQNRDGIV
380 390 400 410 420 430
80 90 100 110 120 130
pF1KE4 MVSADAYKITPGARGAFSE--EYKRLDEDLAAYCRRRDIRILVLDDTNHERERLEQLFEM
. . : .. : : .. . . ... : . ...:.:: . ... :.
XP_016 FSTDDYFHHQDGYRYNVNQLGDAHDWNQNRAKQAIDQGRSPVIIDNTNIQAWEMKPYVEV
440 450 460 470 480 490
140 150 160 170 180 190
pF1KE4 ADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPGLEKDFLPLYFGWFLTKK
: :.: . ::.: :..: .:...:. .: . ..
XP_016 AIGKGYRVEFHEPETWWKFDPEELEKRNKHGVSRKKIAQMLDRYEYQMSISIVMNSVEPS
500 510 520 530 540 550
200 210 220 230 240 250
pF1KE4 SSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVTYFGKRPPGVLHCTTKFC
XP_016 HKSTQRPPPPQGRQRWGGSLGSHNRVCVTNNH
560 570 580
>>XP_016875838 (OMIM: 615788) PREDICTED: NEDD4-binding p (583 aa)
initn: 146 init1: 123 opt: 203 Z-score: 233.8 bits: 52.7 E(85289): 2.8e-06
Smith-Waterman score: 203; 27.7% identity (60.8% similar) in 130 aa overlap (50-177:402-531)
20 30 40 50 60 70
pF1KE4 KMSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPGSGKSTLARVIVDKYRDGTK
: :..:::::::::.::.:... . :::
XP_016 CWKDHCMDKHNGTDRFVNQQFQEEKLNKLQKLLILLRGLPGSGKTTLSRILLGQNRDGIV
380 390 400 410 420 430
80 90 100 110 120 130
pF1KE4 MVSADAYKITPGARGAFSE--EYKRLDEDLAAYCRRRDIRILVLDDTNHERERLEQLFEM
. . : .. : : .. . . ... : . ...:.:: . ... :.
XP_016 FSTDDYFHHQDGYRYNVNQLGDAHDWNQNRAKQAIDQGRSPVIIDNTNIQAWEMKPYVEV
440 450 460 470 480 490
140 150 160 170 180 190
pF1KE4 ADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPGLEKDFLPLYFGWFLTKK
: :.: . ::.: :..: .:...:. .: . ..
XP_016 AIGKGYRVEFHEPETWWKFDPEELEKRNKHGVSRKKIAQMLDRYEYQMSISIVMNSVEPS
500 510 520 530 540 550
200 210 220 230 240 250
pF1KE4 SSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVTYFGKRPPGVLHCTTKFC
XP_016 HKSTQRPPPPQGRQRWGGSLGSHNRVCVTNNH
560 570 580
>>NP_055702 (OMIM: 615788) NEDD4-binding protein 2-like (583 aa)
initn: 146 init1: 123 opt: 203 Z-score: 233.8 bits: 52.7 E(85289): 2.8e-06
Smith-Waterman score: 203; 27.7% identity (60.8% similar) in 130 aa overlap (50-177:402-531)
20 30 40 50 60 70
pF1KE4 KMSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPGSGKSTLARVIVDKYRDGTK
: :..:::::::::.::.:... . :::
NP_055 CWKDHCMDKHNGTDRFVNQQFQEEKLNKLQKLLILLRGLPGSGKTTLSRILLGQNRDGIV
380 390 400 410 420 430
80 90 100 110 120 130
pF1KE4 MVSADAYKITPGARGAFSE--EYKRLDEDLAAYCRRRDIRILVLDDTNHERERLEQLFEM
. . : .. : : .. . . ... : . ...:.:: . ... :.
NP_055 FSTDDYFHHQDGYRYNVNQLGDAHDWNQNRAKQAIDQGRSPVIIDNTNIQAWEMKPYVEV
440 450 460 470 480 490
140 150 160 170 180 190
pF1KE4 ADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPGLEKDFLPLYFGWFLTKK
: :.: . ::.: :..: .:...:. .: . ..
NP_055 AIGKGYRVEFHEPETWWKFDPEELEKRNKHGVSRKKIAQMLDRYEYQMSISIVMNSVEPS
500 510 520 530 540 550
200 210 220 230 240 250
pF1KE4 SSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVTYFGKRPPGVLHCTTKFC
NP_055 HKSTQRPPPPQGRQRWGGSLGSHNRVCVTNNH
560 570 580
>>XP_016875836 (OMIM: 615788) PREDICTED: NEDD4-binding p (583 aa)
initn: 146 init1: 123 opt: 203 Z-score: 233.8 bits: 52.7 E(85289): 2.8e-06
Smith-Waterman score: 203; 27.7% identity (60.8% similar) in 130 aa overlap (50-177:402-531)
20 30 40 50 60 70
pF1KE4 KMSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPGSGKSTLARVIVDKYRDGTK
: :..:::::::::.::.:... . :::
XP_016 CWKDHCMDKHNGTDRFVNQQFQEEKLNKLQKLLILLRGLPGSGKTTLSRILLGQNRDGIV
380 390 400 410 420 430
80 90 100 110 120 130
pF1KE4 MVSADAYKITPGARGAFSE--EYKRLDEDLAAYCRRRDIRILVLDDTNHERERLEQLFEM
. . : .. : : .. . . ... : . ...:.:: . ... :.
XP_016 FSTDDYFHHQDGYRYNVNQLGDAHDWNQNRAKQAIDQGRSPVIIDNTNIQAWEMKPYVEV
440 450 460 470 480 490
140 150 160 170 180 190
pF1KE4 ADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPGLEKDFLPLYFGWFLTKK
: :.: . ::.: :..: .:...:. .: . ..
XP_016 AIGKGYRVEFHEPETWWKFDPEELEKRNKHGVSRKKIAQMLDRYEYQMSISIVMNSVEPS
500 510 520 530 540 550
200 210 220 230 240 250
pF1KE4 SSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVTYFGKRPPGVLHCTTKFC
XP_016 HKSTQRPPPPQGRQRWGGSLGSHNRVCVTNNH
560 570 580
>>XP_016875831 (OMIM: 615788) PREDICTED: NEDD4-binding p (600 aa)
initn: 123 init1: 123 opt: 203 Z-score: 233.6 bits: 52.8 E(85289): 2.8e-06
Smith-Waterman score: 203; 27.7% identity (60.8% similar) in 130 aa overlap (50-177:402-531)
20 30 40 50 60 70
pF1KE4 KMSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPGSGKSTLARVIVDKYRDGTK
: :..:::::::::.::.:... . :::
XP_016 CWKDHCMDKHNGTDRFVNQQFQEEKLNKLQKLLILLRGLPGSGKTTLSRILLGQNRDGIV
380 390 400 410 420 430
80 90 100 110 120 130
pF1KE4 MVSADAYKITPGARGAFSE--EYKRLDEDLAAYCRRRDIRILVLDDTNHERERLEQLFEM
. . : .. : : .. . . ... : . ...:.:: . ... :.
XP_016 FSTDDYFHHQDGYRYNVNQLGDAHDWNQNRAKQAIDQGRSPVIIDNTNIQAWEMKPYVEV
440 450 460 470 480 490
140 150 160 170 180 190
pF1KE4 ADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPGLEKDFLPLYFGWFLTKK
: :.: . ::.: :..: .:...:. .: . ..
XP_016 AIGKGYRVEFHEPETWWKFDPEELEKRNKHGVSRKKIAQMLDRYEYQMSISIVMNSVEPS
500 510 520 530 540 550
200 210 220 230 240 250
pF1KE4 SSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVTYFGKRPPGVLHCTTKFC
XP_016 HKSTQRPPPPQGRQRRSLALLPRLESSGAILAHCKLCLPGSRHSPASAS
560 570 580 590 600
>>XP_016875818 (OMIM: 615788) PREDICTED: NEDD4-binding p (1181 aa)
initn: 151 init1: 123 opt: 203 Z-score: 229.3 bits: 52.9 E(85289): 5e-06
Smith-Waterman score: 203; 27.7% identity (60.8% similar) in 130 aa overlap (50-177:402-531)
20 30 40 50 60 70
pF1KE4 KMSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPGSGKSTLARVIVDKYRDGTK
: :..:::::::::.::.:... . :::
XP_016 CWKDHCMDKHNGTDRFVNQQFQEEKLNKLQKLLILLRGLPGSGKTTLSRILLGQNRDGIV
380 390 400 410 420 430
80 90 100 110 120 130
pF1KE4 MVSADAYKITPGARGAFSE--EYKRLDEDLAAYCRRRDIRILVLDDTNHERERLEQLFEM
. . : .. : : .. . . ... : . ...:.:: . ... :.
XP_016 FSTDDYFHHQDGYRYNVNQLGDAHDWNQNRAKQAIDQGRSPVIIDNTNIQAWEMKPYVEV
440 450 460 470 480 490
140 150 160 170 180 190
pF1KE4 ADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPGLEKDFLPLYFGWFLTKK
: :.: . ::.: :..: .:...:. .: . ..
XP_016 AIGKGYRVEFHEPETWWKFDPEELEKRNKHGVSRKKIAQMLDRYEYQMSISIVMNSVEPS
500 510 520 530 540 550
200 210 220 230 240 250
pF1KE4 SSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVTYFGKRPPGVLHCTTKFC
XP_016 HKSTQRPPPPQGRQRERVLKKTGHRLSKTKQKRNRKRNKKQNSQNRIMEENSLEFLSDLT
560 570 580 590 600 610
421 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 9 12:19:37 2016 done: Wed Nov 9 12:19:38 2016
Total Scan time: 9.290 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]