Result of FASTA (ccds) for
pFN21AE4402
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4402, 417 aa
1>>>pF1KE4402 417 - 417 aa - 417 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6737+/-0.000814; mu= 15.1063+/- 0.049
mean_var=66.4815+/-13.426, 0's: 0 Z-trim(106.7): 8 B-trim: 0 in 0/50
Lambda= 0.157298
statistics sampled from 9128 (9133) to 9128 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.665), E-opt: 0.2 (0.281), width: 16
Scan time: 2.770
The best scores are: opt bits E(32554)
CCDS10097.1 CKMT1B gene_id:1159|Hs108|chr15 ( 417) 2823 649.5 1.7e-186
CCDS32217.1 CKMT1A gene_id:548596|Hs108|chr15 ( 417) 2823 649.5 1.7e-186
CCDS4053.1 CKMT2 gene_id:1160|Hs108|chr5 ( 419) 2285 527.4 9.7e-150
CCDS9981.1 CKB gene_id:1152|Hs108|chr14 ( 381) 1735 402.6 3.3e-112
CCDS12659.1 CKM gene_id:1158|Hs108|chr19 ( 381) 1686 391.5 7.4e-109
>>CCDS10097.1 CKMT1B gene_id:1159|Hs108|chr15 (417 aa)
initn: 2823 init1: 2823 opt: 2823 Z-score: 3461.7 bits: 649.5 E(32554): 1.7e-186
Smith-Waterman score: 2823; 100.0% identity (100.0% similar) in 417 aa overlap (1-417:1-417)
10 20 30 40 50 60
pF1KE4 MAGPFSRLLSARPGLRLLALAGAGSLAAGFLLRPEPVRAASERRRLYPPSAEYPDLRKHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MAGPFSRLLSARPGLRLLALAGAGSLAAGFLLRPEPVRAASERRRLYPPSAEYPDLRKHN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 NCMASHLTPAVYARLCDKTTPTGWTLDQCIQTGVDNPGHPFIKTVGMVAGDEETYEVFAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 NCMASHLTPAVYARLCDKTTPTGWTLDQCIQTGVDNPGHPFIKTVGMVAGDEETYEVFAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 LFDPVIQERHNGYDPRTMKHTTDLDASKIRSGYFDERYVLSSRVRTGRSIRGLSLPPACT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LFDPVIQERHNGYDPRTMKHTTDLDASKIRSGYFDERYVLSSRVRTGRSIRGLSLPPACT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 RAERREVERVVVDALSGLKGDLAGRYYRLSEMTEAEQQQLIDDHFLFDKPVSPLLTAAGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RAERREVERVVVDALSGLKGDLAGRYYRLSEMTEAEQQQLIDDHFLFDKPVSPLLTAAGM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ARDWPDARGIWHNNEKSFLIWVNEEDHTRVISMEKGGNMKRVFERFCRGLKEVERLIQER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ARDWPDARGIWHNNEKSFLIWVNEEDHTRVISMEKGGNMKRVFERFCRGLKEVERLIQER
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 GWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLLSKDSRFPKILENLRLQKRGTGGVDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLLSKDSRFPKILENLRLQKRGTGGVDT
310 320 330 340 350 360
370 380 390 400 410
pF1KE4 AATGGVFDISNLDRLGKSEVELVQLVIDGVNYLIDCERRLERGQDIRIPTPVIHTKH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AATGGVFDISNLDRLGKSEVELVQLVIDGVNYLIDCERRLERGQDIRIPTPVIHTKH
370 380 390 400 410
>>CCDS32217.1 CKMT1A gene_id:548596|Hs108|chr15 (417 aa)
initn: 2823 init1: 2823 opt: 2823 Z-score: 3461.7 bits: 649.5 E(32554): 1.7e-186
Smith-Waterman score: 2823; 100.0% identity (100.0% similar) in 417 aa overlap (1-417:1-417)
10 20 30 40 50 60
pF1KE4 MAGPFSRLLSARPGLRLLALAGAGSLAAGFLLRPEPVRAASERRRLYPPSAEYPDLRKHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MAGPFSRLLSARPGLRLLALAGAGSLAAGFLLRPEPVRAASERRRLYPPSAEYPDLRKHN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 NCMASHLTPAVYARLCDKTTPTGWTLDQCIQTGVDNPGHPFIKTVGMVAGDEETYEVFAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 NCMASHLTPAVYARLCDKTTPTGWTLDQCIQTGVDNPGHPFIKTVGMVAGDEETYEVFAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 LFDPVIQERHNGYDPRTMKHTTDLDASKIRSGYFDERYVLSSRVRTGRSIRGLSLPPACT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LFDPVIQERHNGYDPRTMKHTTDLDASKIRSGYFDERYVLSSRVRTGRSIRGLSLPPACT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 RAERREVERVVVDALSGLKGDLAGRYYRLSEMTEAEQQQLIDDHFLFDKPVSPLLTAAGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 RAERREVERVVVDALSGLKGDLAGRYYRLSEMTEAEQQQLIDDHFLFDKPVSPLLTAAGM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ARDWPDARGIWHNNEKSFLIWVNEEDHTRVISMEKGGNMKRVFERFCRGLKEVERLIQER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ARDWPDARGIWHNNEKSFLIWVNEEDHTRVISMEKGGNMKRVFERFCRGLKEVERLIQER
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 GWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLLSKDSRFPKILENLRLQKRGTGGVDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 GWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLLSKDSRFPKILENLRLQKRGTGGVDT
310 320 330 340 350 360
370 380 390 400 410
pF1KE4 AATGGVFDISNLDRLGKSEVELVQLVIDGVNYLIDCERRLERGQDIRIPTPVIHTKH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 AATGGVFDISNLDRLGKSEVELVQLVIDGVNYLIDCERRLERGQDIRIPTPVIHTKH
370 380 390 400 410
>>CCDS4053.1 CKMT2 gene_id:1160|Hs108|chr5 (419 aa)
initn: 2280 init1: 2213 opt: 2285 Z-score: 2801.8 bits: 527.4 E(32554): 9.7e-150
Smith-Waterman score: 2285; 80.1% identity (92.5% similar) in 413 aa overlap (1-412:1-413)
10 20 30 40 50
pF1KE4 MAGPFSRLLSARPGLRLLALAGAGSLAAGFLLRPEPVRA-ASERRRLYPPSAEYPDLRKH
::. ::.::..: . :.: :.. :..:.:: . : : . :. ::.::::.:::::::
CCDS40 MASIFSKLLTGRNASLLFATMGTSVLTTGYLLNRQKVCAEVREQPRLFPPSADYPDLRKH
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE4 NNCMASHLTPAVYARLCDKTTPTGWTLDQCIQTGVDNPGHPFIKTVGMVAGDEETYEVFA
::::: ::::.::.: .:.::.:.:::::::::::::::::::::::::::::.:::::
CCDS40 NNCMAECLTPAIYAKLRNKVTPNGYTLDQCIQTGVDNPGHPFIKTVGMVAGDEESYEVFA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE4 DLFDPVIQERHNGYDPRTMKHTTDLDASKIRSGYFDERYVLSSRVRTGRSIRGLSLPPAC
:::::::. ::::::::.:::::::::::: .: :::.::::::::::::::::::::::
CCDS40 DLFDPVIKLRHNGYDPRVMKHTTDLDASKITQGQFDEHYVLSSRVRTGRSIRGLSLPPAC
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE4 TRAERREVERVVVDALSGLKGDLAGRYYRLSEMTEAEQQQLIDDHFLFDKPVSPLLTAAG
::::::::: :.. :: :::::::::::.:::::: .::.::::::::::::::::: ::
CCDS40 TRAERREVENVAITALEGLKGDLAGRYYKLSEMTEQDQQRLIDDHFLFDKPVSPLLTCAG
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE4 MARDWPDARGIWHNNEKSFLIWVNEEDHTRVISMEKGGNMKRVFERFCRGLKEVERLIQE
:::::::::::::: .:.::::.:::::::::::::::::::::::::::::::::::::
CCDS40 MARDWPDARGIWHNYDKTFLIWINEEDHTRVISMEKGGNMKRVFERFCRGLKEVERLIQE
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE4 RGWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLLSKDSRFPKILENLRLQKRGTGGVD
::::::::::::::::::::::::::::::...: :::: :: :::::::::::::::::
CCDS40 RGWEFMWNERLGYILTCPSNLGTGLRAGVHVRIPKLSKDPRFSKILENLRLQKRGTGGVD
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE4 TAATGGVFDISNLDRLGKSEVELVQLVIDGVNYLIDCERRLERGQDIRIPTPVIHTKH
:::.. :.::::.::.:.:::::::.::::::::.:::..:::::::..: :.
CCDS40 TAAVADVYDISNIDRIGRSEVELVQIVIDGVNYLVDCEKKLERGQDIKVPPPLPQFGKK
370 380 390 400 410
>>CCDS9981.1 CKB gene_id:1152|Hs108|chr14 (381 aa)
initn: 1681 init1: 1681 opt: 1735 Z-score: 2127.9 bits: 402.6 E(32554): 3.3e-112
Smith-Waterman score: 1735; 69.8% identity (86.7% similar) in 361 aa overlap (47-406:14-373)
20 30 40 50 60 70
pF1KE4 LLALAGAGSLAAGFLLRPEPVRAASERRRLYPPSAEYPDLRKHNNCMASHLTPAVYARLC
.: :.::: ::: ::. ::: .::.:
CCDS99 MPFSNSHNALKLRFPAEDEFPDLSAHNNHMAKVLTPELYAELR
10 20 30 40
80 90 100 110 120 130
pF1KE4 DKTTPTGWTLDQCIQTGVDNPGHPFIKTVGMVAGDEETYEVFADLFDPVIQERHNGYDPR
:.::.:.:::. :::::::::::.: ::: ::::::.:::: :::::.:..::.:: :
CCDS99 AKSTPSGFTLDDVIQTGVDNPGHPYIMTVGCVAGDEESYEVFKDLFDPIIEDRHGGYKP-
50 60 70 80 90 100
140 150 160 170 180 190
pF1KE4 TMKHTTDLDASKIRSGY-FDERYVLSSRVRTGRSIRGLSLPPACTRAERREVERVVVDAL
. .: :::. .....: .: :::::::::::::::. ::: :.:.::: .:...:.::
CCDS99 SDEHKTDLNPDNLQGGDDLDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEAL
110 120 130 140 150 160
200 210 220 230 240 250
pF1KE4 SGLKGDLAGRYYRLSEMTEAEQQQLIDDHFLFDKPVSPLLTAAGMARDWPDARGIWHNNE
:.: :::::::: :. :::::::::::::::::::::::: :.:::::::::::::::..
CCDS99 SSLDGDLAGRYYALKSMTEAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDN
170 180 190 200 210 220
260 270 280 290 300 310
pF1KE4 KSFLIWVNEEDHTRVISMEKGGNMKRVFERFCRGLKEVERLIQERGWEFMWNERLGYILT
:.::.::::::: :::::.::::::.:: ::: :: ..: :.. . .::::: .::::::
CCDS99 KTFLVWVNEEDHLRVISMQKGGNMKEVFTRFCTGLTQIETLFKSKDYEFMWNPHLGYILT
230 240 250 260 270 280
320 330 340 350 360 370
pF1KE4 CPSNLGTGLRAGVHIKLPLLSKDSRFPKILENLRLQKRGTGGVDTAATGGVFDISNLDRL
:::::::::::::::::: :.: .: ..:. :::::::::::::::.:::::.:: :::
CCDS99 CPSNLGTGLRAGVHIKLPNLGKHEKFSEVLKRLRLQKRGTGGVDTAAVGGVFDVSNADRL
290 300 310 320 330 340
380 390 400 410
pF1KE4 GKSEVELVQLVIDGVNYLIDCERRLERGQDIRIPTPVIHTKH
: :::::::.:.:::. ::. :.:::.:: :
CCDS99 GFSEVELVQMVVDGVKLLIEMEQRLEQGQAIDDLMPAQK
350 360 370 380
>>CCDS12659.1 CKM gene_id:1158|Hs108|chr19 (381 aa)
initn: 1683 init1: 1630 opt: 1686 Z-score: 2067.8 bits: 391.5 E(32554): 7.4e-109
Smith-Waterman score: 1686; 67.6% identity (85.9% similar) in 361 aa overlap (47-406:14-373)
20 30 40 50 60 70
pF1KE4 LLALAGAGSLAAGFLLRPEPVRAASERRRLYPPSAEYPDLRKHNNCMASHLTPAVYARLC
: : ::::: :::: ::. :: .: .:
CCDS12 MPFGNTHNKFKLNYKPEEEYPDLSKHNNHMAKVLTLELYKKLR
10 20 30 40
80 90 100 110 120 130
pF1KE4 DKTTPTGWTLDQCIQTGVDNPGHPFIKTVGMVAGDEETYEVFADLFDPVIQERHNGYDPR
:: ::.:.:.:. ::::::::::::: ::: ::::::.:::: .::::.:..::.:: :
CCDS12 DKETPSGFTVDDVIQTGVDNPGHPFIMTVGCVAGDEESYEVFKELFDPIISDRHGGYKP-
50 60 70 80 90 100
140 150 160 170 180 190
pF1KE4 TMKHTTDLDASKIRSGY-FDERYVLSSRVRTGRSIRGLSLPPACTRAERREVERVVVDAL
: :: :::. ....: .: :::::::::::::.: .::: :.:.::: ::.. :.::
CCDS12 TDKHKTDLNHENLKGGDDLDPNYVLSSRVRTGRSIKGYTLPPHCSRGERRAVEKLSVEAL
110 120 130 140 150 160
200 210 220 230 240 250
pF1KE4 SGLKGDLAGRYYRLSEMTEAEQQQLIDDHFLFDKPVSPLLTAAGMARDWPDARGIWHNNE
..: :.. :.:: :. ::: :::::::::::::::::::: :.:::::::::::::::..
CCDS12 NSLTGEFKGKYYPLKSMTEKEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDN
170 180 190 200 210 220
260 270 280 290 300 310
pF1KE4 KSFLIWVNEEDHTRVISMEKGGNMKRVFERFCRGLKEVERLIQERGWEFMWNERLGYILT
::::.::::::: ::::::::::::.::.::: ::...:..... : ::::..:::.::
CCDS12 KSFLVWVNEEDHLRVISMEKGGNMKEVFRRFCVGLQKIEEIFKKAGHPFMWNQHLGYVLT
230 240 250 260 270 280
320 330 340 350 360 370
pF1KE4 CPSNLGTGLRAGVHIKLPLLSKDSRFPKILENLRLQKRGTGGVDTAATGGVFDISNLDRL
::::::::::.:::.:: ::: .: .:: :::::::::::::::.:.:::.:: :::
CCDS12 CPSNLGTGLRGGVHVKLAHLSKHPKFEEILTRLRLQKRGTGGVDTAAVGSVFDVSNADRL
290 300 310 320 330 340
380 390 400 410
pF1KE4 GKSEVELVQLVIDGVNYLIDCERRLERGQDIRIPTPVIHTKH
:.:::: ::::.:::. ... :..::.::.:
CCDS12 GSSEVEQVQLVVDGVKLMVEMEKKLEKGQSIDDMIPAQK
350 360 370 380
417 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 01:22:24 2016 done: Sun Nov 6 01:22:25 2016
Total Scan time: 2.770 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]