Result of FASTA (omim) for
pFN21AE4374
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4374, 392 aa
1>>>pF1KE4374 392 - 392 aa - 392 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0468+/-0.00033; mu= 18.2182+/- 0.021
mean_var=65.0562+/-13.109, 0's: 0 Z-trim(115.1): 11 B-trim: 19 in 1/53
Lambda= 0.159012
statistics sampled from 25353 (25362) to 25353 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.681), E-opt: 0.2 (0.297), width: 16
Scan time: 8.470
The best scores are: opt bits E(85289)
NP_001181 (OMIM: 113530) branched-chain-amino-acid ( 392) 2707 629.7 3.6e-180
NP_001271254 (OMIM: 113530) branched-chain-amino-a ( 352) 2439 568.2 1.1e-161
NP_001158245 (OMIM: 113530) branched-chain-amino-a ( 300) 2009 469.5 4.6e-132
NP_001171565 (OMIM: 113520) branched-chain-amino-a ( 385) 1537 361.3 2.2e-99
NP_005495 (OMIM: 113520) branched-chain-amino-acid ( 386) 1537 361.3 2.2e-99
NP_001171564 (OMIM: 113520) branched-chain-amino-a ( 398) 1537 361.3 2.3e-99
NP_001171563 (OMIM: 113520) branched-chain-amino-a ( 325) 1119 265.4 1.4e-70
NP_001171562 (OMIM: 113520) branched-chain-amino-a ( 349) 1119 265.4 1.5e-70
XP_016875257 (OMIM: 113520) PREDICTED: branched-ch ( 420) 1119 265.4 1.7e-70
>>NP_001181 (OMIM: 113530) branched-chain-amino-acid ami (392 aa)
initn: 2707 init1: 2707 opt: 2707 Z-score: 3355.7 bits: 629.7 E(85289): 3.6e-180
Smith-Waterman score: 2707; 100.0% identity (100.0% similar) in 392 aa overlap (1-392:1-392)
10 20 30 40 50 60
pF1KE4 MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVFGKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVFGKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 FTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 WLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 GVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 QQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 LLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIP
310 320 330 340 350 360
370 380 390
pF1KE4 TMENGPELILRFQKELKEIQYGIRAHEWMFPV
::::::::::::::::::::::::::::::::
NP_001 TMENGPELILRFQKELKEIQYGIRAHEWMFPV
370 380 390
>>NP_001271254 (OMIM: 113530) branched-chain-amino-acid (352 aa)
initn: 2439 init1: 2439 opt: 2439 Z-score: 3024.1 bits: 568.2 E(85289): 1.1e-161
Smith-Waterman score: 2439; 100.0% identity (100.0% similar) in 352 aa overlap (41-392:1-352)
20 30 40 50 60 70
pF1KE4 ARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVFGKTFTDHMLMVEW
::::::::::::::::::::::::::::::
NP_001 MTQKPHKKPGPGEPLVFGKTFTDHMLMVEW
10 20 30
80 90 100 110 120 130
pF1KE4 NDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRS
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE4 AMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPTRALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPTRALL
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE4 FVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCE
160 170 180 190 200 210
260 270 280 290 300 310
pF1KE4 QVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWGE
220 230 240 250 260 270
320 330 340 350 360 370
pF1KE4 FRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTMENGPELIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTMENGPELIL
280 290 300 310 320 330
380 390
pF1KE4 RFQKELKEIQYGIRAHEWMFPV
::::::::::::::::::::::
NP_001 RFQKELKEIQYGIRAHEWMFPV
340 350
>>NP_001158245 (OMIM: 113530) branched-chain-amino-acid (300 aa)
initn: 2009 init1: 2009 opt: 2009 Z-score: 2492.0 bits: 469.5 E(85289): 4.6e-132
Smith-Waterman score: 2009; 100.0% identity (100.0% similar) in 293 aa overlap (100-392:8-300)
70 80 90 100 110 120
pF1KE4 WNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLR
::::::::::::::::::::::::::::::
NP_001 MAAAALGQLFEGMKAFKGKDQQVRLFRPWLNMDRMLR
10 20 30
130 140 150 160 170 180
pF1KE4 SAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPTRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPTRAL
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE4 LFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGC
100 110 120 130 140 150
250 260 270 280 290 300
pF1KE4 EQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSLLDMAQTWG
160 170 180 190 200 210
310 320 330 340 350 360
pF1KE4 EFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTMENGPELI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTMENGPELI
220 230 240 250 260 270
370 380 390
pF1KE4 LRFQKELKEIQYGIRAHEWMFPV
:::::::::::::::::::::::
NP_001 LRFQKELKEIQYGIRAHEWMFPV
280 290 300
>>NP_001171565 (OMIM: 113520) branched-chain-amino-acid (385 aa)
initn: 1427 init1: 1427 opt: 1537 Z-score: 1905.2 bits: 361.3 E(85289): 2.2e-99
Smith-Waterman score: 1537; 58.6% identity (83.7% similar) in 367 aa overlap (23-388:15-380)
10 20 30 40 50 60
pF1KE4 MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVFGKT
: . . ..::: :: . . ..:: :.. :::: .
NP_001 MDCSNGCSAECTGEGGSKEVVGTFKAKDLIVTPATILKEKPDPNN-LVFGTV
10 20 30 40 50
70 80 90 100 110
pF1KE4 FTDHMLMVEWNDK-GWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFR
:::::: :::... :: .:.:.:.:::.:::.::.:::...::::.:::.: :...:::.
NP_001 FTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE4 PWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPS
: :::::: :::.: :: ::: ::::::..:...:..::: ....:::.::..::.:::
NP_001 PNLNMDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE4 LGVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVL
:::..::.:::::.: ::: :: .:. .:::: :.: ..::: ::.:. :.::::: ...
NP_001 LGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLF
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE4 VQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQ
.: ::. ::.::::::: :::.:::::::.:.:: .::: ::.::::.:.:::::.:.
NP_001 AQCEAVDNGCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRR
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE4 SLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHI
.::.:. ::::.: :: .:: .: ::: .::::.::::::: :::: :::: ...::
NP_001 CILDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHI
300 310 320 330 340 350
360 370 380 390
pF1KE4 PTMENGPELILRFQKELKEIQYGIRAHEWMFPV
:::::::.: :. ..: .:::: . .:
NP_001 PTMENGPKLASRILSKLTDIQYGREESDWTIVLS
360 370 380
>>NP_005495 (OMIM: 113520) branched-chain-amino-acid ami (386 aa)
initn: 1427 init1: 1427 opt: 1537 Z-score: 1905.2 bits: 361.3 E(85289): 2.2e-99
Smith-Waterman score: 1537; 58.6% identity (83.7% similar) in 367 aa overlap (23-388:16-381)
10 20 30 40 50 60
pF1KE4 MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVFGKT
: . . ..::: :: . . ..:: :.. :::: .
NP_005 MKDCSNGCSAECTGEGGSKEVVGTFKAKDLIVTPATILKEKPDPNN-LVFGTV
10 20 30 40 50
70 80 90 100 110
pF1KE4 FTDHMLMVEWNDK-GWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFR
:::::: :::... :: .:.:.:.:::.:::.::.:::...::::.:::.: :...:::.
NP_005 FTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE4 PWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPS
: :::::: :::.: :: ::: ::::::..:...:..::: ....:::.::..::.:::
NP_005 PNLNMDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE4 LGVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVL
:::..::.:::::.: ::: :: .:. .:::: :.: ..::: ::.:. :.::::: ...
NP_005 LGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLF
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE4 VQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQ
.: ::. ::.::::::: :::.:::::::.:.:: .::: ::.::::.:.:::::.:.
NP_005 AQCEAVDNGCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRR
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE4 SLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHI
.::.:. ::::.: :: .:: .: ::: .::::.::::::: :::: :::: ...::
NP_005 CILDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHI
300 310 320 330 340 350
360 370 380 390
pF1KE4 PTMENGPELILRFQKELKEIQYGIRAHEWMFPV
:::::::.: :. ..: .:::: . .:
NP_005 PTMENGPKLASRILSKLTDIQYGREESDWTIVLS
360 370 380
>>NP_001171564 (OMIM: 113520) branched-chain-amino-acid (398 aa)
initn: 1427 init1: 1427 opt: 1537 Z-score: 1905.0 bits: 361.3 E(85289): 2.3e-99
Smith-Waterman score: 1537; 58.6% identity (83.7% similar) in 367 aa overlap (23-388:28-393)
10 20 30 40 50
pF1KE4 MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPL
: . . ..::: :: . . ..:: :.. :
NP_001 MASPLRSAAALARQDCSNGCSAECTGEGGSKEVVGTFKAKDLIVTPATILKEKPDPNN-L
10 20 30 40 50
60 70 80 90 100 110
pF1KE4 VFGKTFTDHMLMVEWNDK-GWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQ
::: .:::::: :::... :: .:.:.:.:::.:::.::.:::...::::.:::.: :..
NP_001 VFGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE4 VRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLI
.:::.: :::::: :::.: :: ::: ::::::..:...:..::: ....:::.::..:
NP_001 IRLFQPNLNMDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE4 GNEPSLGVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNY
:.::::::..::.:::::.: ::: :: .:. .:::: :.: ..::: ::.:. :.::::
NP_001 GTEPSLGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNY
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE4 GPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILP
: ....: ::. ::.::::::: :::.:::::::.:.:: .::: ::.::::.:.:::
NP_001 GSSLFAQCEAVDNGCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILP
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE4 GVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKD
::.:. .::.:. ::::.: :: .:: .: ::: .::::.::::::: :::: ::::
NP_001 GVTRRCILDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKG
300 310 320 330 340 350
360 370 380 390
pF1KE4 RNLHIPTMENGPELILRFQKELKEIQYGIRAHEWMFPV
...:::::::::.: :. ..: .:::: . .:
NP_001 ETIHIPTMENGPKLASRILSKLTDIQYGREESDWTIVLS
360 370 380 390
>>NP_001171563 (OMIM: 113520) branched-chain-amino-acid (325 aa)
initn: 1108 init1: 1108 opt: 1119 Z-score: 1388.0 bits: 265.4 E(85289): 1.4e-70
Smith-Waterman score: 1267; 52.7% identity (75.6% similar) in 357 aa overlap (33-388:2-320)
10 20 30 40 50 60
pF1KE4 AAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVFGKTFT
:: :: . . ..:: :.. :::: .::
NP_001 MKAKDLIVTPATILKEKPDPNN-LVFGTVFT
10 20 30
70 80 90 100 110 120
pF1KE4 DHMLMVEWNDK-GWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPW
:::: :::... :: .:.:.:.:::.:::.::.:::....:
NP_001 DHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVEVF-------------------
40 50 60 70
130 140 150 160 170 180
pF1KE4 LNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLG
:: ::::::..:...:..::: ....:::.::..::.:::::
NP_001 ------------------DKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLG
80 90 100 110
190 200 210 220 230 240
pF1KE4 VSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQ
:..::.:::::.: ::: :: .:. .:::: :.: ..::: ::.:. :.::::: ....:
NP_001 VKKPTKALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQ
120 130 140 150 160 170
250 260 270 280 290 300
pF1KE4 QEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQSL
::. ::.::::::: :::.:::::::.:.:: .::: ::.::::.:.:::::.:. .
NP_001 CEAVDNGCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCI
180 190 200 210 220 230
310 320 330 340 350 360
pF1KE4 LDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPT
::.:. ::::.: :: .:: .: ::: .::::.::::::: :::: :::: ...::::
NP_001 LDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPT
240 250 260 270 280 290
370 380 390
pF1KE4 MENGPELILRFQKELKEIQYGIRAHEWMFPV
:::::.: :. ..: .:::: . .:
NP_001 MENGPKLASRILSKLTDIQYGREESDWTIVLS
300 310 320
>>NP_001171562 (OMIM: 113520) branched-chain-amino-acid (349 aa)
initn: 1108 init1: 1108 opt: 1119 Z-score: 1387.6 bits: 265.4 E(85289): 1.5e-70
Smith-Waterman score: 1281; 51.8% identity (75.2% similar) in 367 aa overlap (23-388:16-344)
10 20 30 40 50 60
pF1KE4 MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVFGKT
: . . ..::: :: . . ..:: :.. :::: .
NP_001 MKDCSNGCSAECTGEGGSKEVVGTFKAKDLIVTPATILKEKPDPNN-LVFGTV
10 20 30 40 50
70 80 90 100 110
pF1KE4 FTDHMLMVEWNDK-GWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFR
:::::: :::... :: .:.:.:.:::.:::.::.:::....:
NP_001 FTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVEVF-----------------
60 70 80 90
120 130 140 150 160 170
pF1KE4 PWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPS
:: ::::::..:...:..::: ....:::.::..::.:::
NP_001 --------------------DKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPS
100 110 120 130
180 190 200 210 220 230
pF1KE4 LGVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVL
:::..::.:::::.: ::: :: .:. .:::: :.: ..::: ::.:. :.::::: ...
NP_001 LGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLF
140 150 160 170 180 190
240 250 260 270 280 290
pF1KE4 VQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQ
.: ::. ::.::::::: :::.:::::::.:.:: .::: ::.::::.:.:::::.:.
NP_001 AQCEAVDNGCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRR
200 210 220 230 240 250
300 310 320 330 340 350
pF1KE4 SLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHI
.::.:. ::::.: :: .:: .: ::: .::::.::::::: :::: :::: ...::
NP_001 CILDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHI
260 270 280 290 300 310
360 370 380 390
pF1KE4 PTMENGPELILRFQKELKEIQYGIRAHEWMFPV
:::::::.: :. ..: .:::: . .:
NP_001 PTMENGPKLASRILSKLTDIQYGREESDWTIVLS
320 330 340
>>XP_016875257 (OMIM: 113520) PREDICTED: branched-chain- (420 aa)
initn: 1108 init1: 1108 opt: 1119 Z-score: 1386.4 bits: 265.4 E(85289): 1.7e-70
Smith-Waterman score: 1281; 51.8% identity (75.2% similar) in 367 aa overlap (23-388:87-415)
10 20 30 40 50
pF1KE4 MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPG
: . . ..::: :: . . ..:: :.
XP_016 SLPMASPLRSAAALARQDCSNGCSAECTGEGGSKEVVGTFKAKDLIVTPATILKEKPDPN
60 70 80 90 100 110
60 70 80 90 100 110
pF1KE4 EPLVFGKTFTDHMLMVEWNDK-GWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGK
. :::: .:::::: :::... :: .:.:.:.:::.:::.::.:::....:
XP_016 N-LVFGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVEVF---------
120 130 140 150 160
120 130 140 150 160 170
pF1KE4 DQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRP
:: ::::::..:...:..::: ....:::.::
XP_016 ----------------------------DKEELLECIQQLVKLDQEWVPYSTSASLYIRP
170 180 190
180 190 200 210 220 230
pF1KE4 VLIGNEPSLGVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLG
..::.::::::..::.:::::.: ::: :: .:. .:::: :.: ..::: ::.:. :.:
XP_016 TFIGTEPSLGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMG
200 210 220 230 240 250
240 250 260 270 280 290
pF1KE4 GNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGV
:::: ....: ::. ::.::::::: :::.:::::::.:.:: .::: ::.::::.:.
XP_016 GNYGSSLFAQCEAVDNGCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGI
260 270 280 290 300 310
300 310 320 330 340 350
pF1KE4 ILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRIL
:::::.:. .::.:. ::::.: :: .:: .: ::: .::::.::::::: :::: ::
XP_016 ILPGVTRRCILDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDIL
320 330 340 350 360 370
360 370 380 390
pF1KE4 YKDRNLHIPTMENGPELILRFQKELKEIQYGIRAHEWMFPV
:: ...:::::::::.: :. ..: .:::: . .:
XP_016 YKGETIHIPTMENGPKLASRILSKLTDIQYGREESDWTIVLS
380 390 400 410 420
392 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 23:01:40 2016 done: Sat Nov 5 23:01:42 2016
Total Scan time: 8.470 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]