Result of FASTA (omim) for
pFN21AE4329
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4329, 334 aa
1>>>pF1KE4329 334 - 334 aa - 334 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1455+/-0.000452; mu= 16.6433+/- 0.028
mean_var=60.3656+/-13.098, 0's: 0 Z-trim(108.8): 35 B-trim: 774 in 1/48
Lambda= 0.165074
statistics sampled from 16872 (16906) to 16872 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.554), E-opt: 0.2 (0.198), width: 16
Scan time: 5.100
The best scores are: opt bits E(85289)
NP_001167568 (OMIM: 150100,614128) L-lactate dehyd ( 334) 2161 523.5 2.5e-148
NP_002291 (OMIM: 150100,614128) L-lactate dehydrog ( 334) 2161 523.5 2.5e-148
NP_001302466 (OMIM: 150100,614128) L-lactate dehyd ( 341) 2161 523.5 2.5e-148
XP_006719137 (OMIM: 150100,614128) PREDICTED: L-la ( 353) 1805 438.7 8.6e-123
NP_005557 (OMIM: 150000,612933) L-lactate dehydrog ( 332) 1720 418.5 1e-116
NP_001158886 (OMIM: 150000,612933) L-lactate dehyd ( 361) 1720 418.5 1.1e-116
NP_002292 (OMIM: 150150) L-lactate dehydrogenase C ( 332) 1584 386.1 5.7e-107
NP_059144 (OMIM: 150150) L-lactate dehydrogenase C ( 332) 1584 386.1 5.7e-107
NP_001158888 (OMIM: 150000,612933) L-lactate dehyd ( 241) 1283 314.3 1.6e-85
NP_001158887 (OMIM: 150000,612933) L-lactate dehyd ( 274) 1243 304.8 1.3e-82
XP_016873211 (OMIM: 150150) PREDICTED: L-lactate d ( 216) 1088 267.9 1.4e-71
XP_016873210 (OMIM: 150150) PREDICTED: L-lactate d ( 216) 1088 267.9 1.4e-71
NP_001128711 (OMIM: 150000,612933) L-lactate dehyd ( 274) 1023 252.4 8e-67
XP_016873475 (OMIM: 610985) PREDICTED: ubiquitin-c ( 249) 514 131.2 2.3e-30
NP_001248313 (OMIM: 610985) ubiquitin-conjugating ( 341) 514 131.3 3e-30
NP_001248314 (OMIM: 610985) ubiquitin-conjugating ( 341) 514 131.3 3e-30
XP_016873474 (OMIM: 610985) PREDICTED: ubiquitin-c ( 341) 514 131.3 3e-30
NP_001248312 (OMIM: 610985) ubiquitin-conjugating ( 357) 514 131.3 3.1e-30
NP_060784 (OMIM: 610985) ubiquitin-conjugating enz ( 379) 514 131.3 3.2e-30
NP_001248311 (OMIM: 610985) ubiquitin-conjugating ( 449) 514 131.3 3.8e-30
NP_001035787 (OMIM: 610985) ubiquitin-conjugating ( 471) 514 131.3 3.9e-30
XP_011518503 (OMIM: 610985) PREDICTED: ubiquitin-c ( 248) 389 101.4 2.1e-21
XP_006718318 (OMIM: 610985) PREDICTED: ubiquitin-c ( 248) 389 101.4 2.1e-21
NP_005908 (OMIM: 154200) malate dehydrogenase, cyt ( 334) 220 61.2 3.5e-09
NP_001186040 (OMIM: 154200) malate dehydrogenase, ( 352) 220 61.3 3.6e-09
NP_001303303 (OMIM: 154200) malate dehydrogenase, ( 353) 220 61.3 3.7e-09
NP_005909 (OMIM: 154100) malate dehydrogenase, mit ( 338) 213 59.6 1.1e-08
NP_001248315 (OMIM: 610985) ubiquitin-conjugating ( 199) 209 58.5 1.4e-08
NP_001186041 (OMIM: 154200) malate dehydrogenase, ( 245) 151 44.7 0.00024
NP_001269332 (OMIM: 154100) malate dehydrogenase, ( 296) 131 40.0 0.0076
>>NP_001167568 (OMIM: 150100,614128) L-lactate dehydroge (334 aa)
initn: 2161 init1: 2161 opt: 2161 Z-score: 2784.1 bits: 523.5 E(85289): 2.5e-148
Smith-Waterman score: 2161; 100.0% identity (100.0% similar) in 334 aa overlap (1-334:1-334)
10 20 30 40 50 60
pF1KE4 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
250 260 270 280 290 300
310 320 330
pF1KE4 LTSVINQKLKDDEVAQLKKSADTLWDIQKDLKDL
::::::::::::::::::::::::::::::::::
NP_001 LTSVINQKLKDDEVAQLKKSADTLWDIQKDLKDL
310 320 330
>>NP_002291 (OMIM: 150100,614128) L-lactate dehydrogenas (334 aa)
initn: 2161 init1: 2161 opt: 2161 Z-score: 2784.1 bits: 523.5 E(85289): 2.5e-148
Smith-Waterman score: 2161; 100.0% identity (100.0% similar) in 334 aa overlap (1-334:1-334)
10 20 30 40 50 60
pF1KE4 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
250 260 270 280 290 300
310 320 330
pF1KE4 LTSVINQKLKDDEVAQLKKSADTLWDIQKDLKDL
::::::::::::::::::::::::::::::::::
NP_002 LTSVINQKLKDDEVAQLKKSADTLWDIQKDLKDL
310 320 330
>>NP_001302466 (OMIM: 150100,614128) L-lactate dehydroge (341 aa)
initn: 2161 init1: 2161 opt: 2161 Z-score: 2784.0 bits: 523.5 E(85289): 2.5e-148
Smith-Waterman score: 2161; 100.0% identity (100.0% similar) in 334 aa overlap (1-334:1-334)
10 20 30 40 50 60
pF1KE4 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
250 260 270 280 290 300
310 320 330
pF1KE4 LTSVINQKLKDDEVAQLKKSADTLWDIQKDLKDL
::::::::::::::::::::::::::::::::::
NP_001 LTSVINQKLKDDEVAQLKKSADTLWDIQKDLKDLXLVSSRL
310 320 330 340
>>XP_006719137 (OMIM: 150100,614128) PREDICTED: L-lactat (353 aa)
initn: 1805 init1: 1805 opt: 1805 Z-score: 2325.5 bits: 438.7 E(85289): 8.6e-123
Smith-Waterman score: 1805; 100.0% identity (100.0% similar) in 279 aa overlap (1-279:1-279)
10 20 30 40 50 60
pF1KE4 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
:::::::::::::::::::::::::::::::::::::::
XP_006 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKVRQTTTKCNMISRIVFYKKIH
250 260 270 280 290 300
310 320 330
pF1KE4 LTSVINQKLKDDEVAQLKKSADTLWDIQKDLKDL
XP_006 LKRLRPDKIIVQGYFCLSKFYVNYSHFPTEVLDSKGRKLRESKTFNRLLSFFI
310 320 330 340 350
>>NP_005557 (OMIM: 150000,612933) L-lactate dehydrogenas (332 aa)
initn: 1712 init1: 1668 opt: 1720 Z-score: 2216.5 bits: 418.5 E(85289): 1e-116
Smith-Waterman score: 1720; 75.6% identity (93.7% similar) in 332 aa overlap (1-332:1-331)
10 20 30 40 50 60
pF1KE4 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
:::::..:: . .:: : :.::::::::: :::::::::: :.::::::::::.:::::
NP_005 MATLKDQLIYNLLKEEQT-PQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLK
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
:::::::::::::.:::::. :::.::::::.:..:::.:::::::::::::::::.:::
NP_005 GEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKF
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
:::..:::::.: ...:::::::::::.::.::.::.::::::::::::::::::.:.::
NP_005 IIPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
.:: :::::.::::::::: ::::.:::::::. :.:..:::.:.:.::::::.::::::
NP_005 VHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAY
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE4 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
:::::::::.:::::::::: ::..::: :.::::::.::.:::...::::.::::. :
NP_005 EVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNG
240 250 260 270 280 290
310 320 330
pF1KE4 LTSVINQKLKDDEVAQLKKSADTLWDIQKDLKDL
...... : ..: :.::::::::: :::.:.
NP_005 ISDLVKVTLTSEEEARLKKSADTLWGIQKELQF
300 310 320 330
>>NP_001158886 (OMIM: 150000,612933) L-lactate dehydroge (361 aa)
initn: 1712 init1: 1668 opt: 1720 Z-score: 2216.0 bits: 418.5 E(85289): 1.1e-116
Smith-Waterman score: 1720; 75.6% identity (93.7% similar) in 332 aa overlap (1-332:30-360)
10 20 30
pF1KE4 MATLKEKLIAPVAEEEATVPNNKITVVGVGQ
:::::..:: . .:: : :.:::::::::
NP_001 MGEPSGGYTYTQTSIFLFHAKIPFGSKSNMATLKDQLIYNLLKEEQT-PQNKITVVGVGA
10 20 30 40 50
40 50 60 70 80 90
pF1KE4 VGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSK
:::::::::: :.::::::::::.::::::::::::::::::.:::::. :::.::::::
NP_001 VGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSK
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE4 IVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNPVDILTYVTWKL
.:..:::.:::::::::::::::::.::::::..:::::.: ...:::::::::::.::.
NP_001 LVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKI
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE4 SGLPKHRVIGSGCNLDSARFRYLMAEKLGIHPSSCHGWILGEHGDSSVAVWSGVNVAGVS
::.::.::::::::::::::::::.:.::.:: :::::.::::::::: ::::.::::::
NP_001 SGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVS
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE4 LQELNPEMGTDNDSENWKEVHKMVVESAYEVIKLKGYTNWAIGLSVADLIESMLKNLSRI
:. :.:..:::.:.:.::::::.:::::::::::::::.:::::::::: ::..::: :.
NP_001 LKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRV
240 250 260 270 280 290
280 290 300 310 320 330
pF1KE4 HPVSTMVKGMYGIENEVFLSLPCILNARGLTSVINQKLKDDEVAQLKKSADTLWDIQKDL
::::::.::.:::...::::.::::. :...... : ..: :.::::::::: :::.:
NP_001 HPVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKVTLTSEEEARLKKSADTLWGIQKEL
300 310 320 330 340 350
pF1KE4 KDL
.
NP_001 QF
360
>>NP_002292 (OMIM: 150150) L-lactate dehydrogenase C cha (332 aa)
initn: 1554 init1: 1554 opt: 1584 Z-score: 2041.5 bits: 386.1 E(85289): 5.7e-107
Smith-Waterman score: 1584; 69.8% identity (90.9% similar) in 331 aa overlap (1-331:1-330)
10 20 30 40 50 60
pF1KE4 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
:.:.::.:: . :.. . . :::.::.: :::::::::: :.:::::::::: ::::
NP_002 MSTVKEQLIEKLIEDDEN-SQCKITIVGTGAVGMACAISILLKDLADELALVDVALDKLK
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
::::::::::::..: ::.. :::::.:::.::.::::.::::::.:: :::::: ..:
NP_002 GEMMDLQHGSLFFSTSKITSGKDYSVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKS
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
::: ::.::::: :.:::::::::::..::.:::: :::::::::::::::::..::::
NP_002 IIPAIVHYSPDCKILVVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
.::.::::::.:::::::: .:::::::::.:. :.:..:::.:.:.::..::.:..:::
NP_002 VHPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAY
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE4 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
:.:::::::.::::::: ::. :.:::: :.:::::::::.:::..:.:::.::.:. :
NP_002 EIIKLKGYTSWAIGLSVMDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNG
240 250 260 270 280 290
310 320 330
pF1KE4 LTSVINQKLKDDEVAQLKKSADTLWDIQKDLKDL
...:.. .:...: : .::::.:::.:::::
NP_002 VSDVVKINLNSEEEALFKKSAETLWNIQKDLIF
300 310 320 330
>>NP_059144 (OMIM: 150150) L-lactate dehydrogenase C cha (332 aa)
initn: 1554 init1: 1554 opt: 1584 Z-score: 2041.5 bits: 386.1 E(85289): 5.7e-107
Smith-Waterman score: 1584; 69.8% identity (90.9% similar) in 331 aa overlap (1-331:1-330)
10 20 30 40 50 60
pF1KE4 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
:.:.::.:: . :.. . . :::.::.: :::::::::: :.:::::::::: ::::
NP_059 MSTVKEQLIEKLIEDDEN-SQCKITIVGTGAVGMACAISILLKDLADELALVDVALDKLK
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
::::::::::::..: ::.. :::::.:::.::.::::.::::::.:: :::::: ..:
NP_059 GEMMDLQHGSLFFSTSKITSGKDYSVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKS
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
::: ::.::::: :.:::::::::::..::.:::: :::::::::::::::::..::::
NP_059 IIPAIVHYSPDCKILVVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
.::.::::::.:::::::: .:::::::::.:. :.:..:::.:.:.::..::.:..:::
NP_059 VHPTSCHGWIIGEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAY
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE4 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
:.:::::::.::::::: ::. :.:::: :.:::::::::.:::..:.:::.::.:. :
NP_059 EIIKLKGYTSWAIGLSVMDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNG
240 250 260 270 280 290
310 320 330
pF1KE4 LTSVINQKLKDDEVAQLKKSADTLWDIQKDLKDL
...:.. .:...: : .::::.:::.:::::
NP_059 VSDVVKINLNSEEEALFKKSAETLWNIQKDLIF
300 310 320 330
>>NP_001158888 (OMIM: 150000,612933) L-lactate dehydroge (241 aa)
initn: 1275 init1: 1231 opt: 1283 Z-score: 1656.2 bits: 314.3 E(85289): 1.6e-85
Smith-Waterman score: 1283; 77.9% identity (94.6% similar) in 240 aa overlap (1-240:1-239)
10 20 30 40 50 60
pF1KE4 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
:::::..:: . .:: : :.::::::::: :::::::::: :.::::::::::.:::::
NP_001 MATLKDQLIYNLLKEEQT-PQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLK
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
:::::::::::::.:::::. :::.::::::.:..:::.:::::::::::::::::.:::
NP_001 GEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKF
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
:::..:::::.: ...:::::::::::.::.::.::.::::::::::::::::::.:.::
NP_001 IIPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
.:: :::::.::::::::: ::::.:::::::. :.:..:::.:.:.::::::.::: ..
NP_001 VHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVERVF
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE4 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
NP_001 TE
240
>>NP_001158887 (OMIM: 150000,612933) L-lactate dehydroge (274 aa)
initn: 1206 init1: 1206 opt: 1243 Z-score: 1603.9 bits: 304.8 E(85289): 1.3e-82
Smith-Waterman score: 1243; 78.7% identity (94.8% similar) in 230 aa overlap (1-230:1-229)
10 20 30 40 50 60
pF1KE4 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK
:::::..:: . .:: : :.::::::::: :::::::::: :.::::::::::.:::::
NP_001 MATLKDQLIYNLLKEEQT-PQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLK
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 GEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKF
:::::::::::::.:::::. :::.::::::.:..:::.:::::::::::::::::.:::
NP_001 GEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKF
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 IIPQIVKYSPDCIIIVVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLG
:::..:::::.: ...:::::::::::.::.::.::.::::::::::::::::::.:.::
NP_001 IIPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 IHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAY
.:: :::::.::::::::: ::::.:::::::. :.:..:::.:.:.:::
NP_001 VHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKECRYTLGDPKG
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE4 EVIKLKGYTNWAIGLSVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARG
NP_001 AAILKSSDVISFHCLGYNRILGGGCACCPFYLICD
240 250 260 270
334 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 02:16:18 2016 done: Sun Nov 6 02:16:19 2016
Total Scan time: 5.100 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]