Result of FASTA (ccds) for
pFN21AE4220
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4220, 759 aa
1>>>pF1KE4220 759 - 759 aa - 759 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.2181+/-0.000808; mu= 11.8800+/- 0.049
mean_var=131.7496+/-27.012, 0's: 0 Z-trim(111.9): 85 B-trim: 0 in 0/53
Lambda= 0.111738
statistics sampled from 12622 (12712) to 12622 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.738), E-opt: 0.2 (0.39), width: 16
Scan time: 3.990
The best scores are: opt bits E(32554)
CCDS1097.1 TRIM46 gene_id:80128|Hs108|chr1 ( 759) 5215 852.4 0
CCDS72931.1 TRIM46 gene_id:80128|Hs108|chr1 ( 746) 5086 831.6 0
CCDS58033.1 TRIM46 gene_id:80128|Hs108|chr1 ( 736) 5076 830.0 0
CCDS72932.1 TRIM46 gene_id:80128|Hs108|chr1 ( 633) 4347 712.4 5.5e-205
CCDS60285.1 TRIM46 gene_id:80128|Hs108|chr1 ( 551) 3649 599.8 3.7e-171
CCDS75287.1 TRIM36 gene_id:55521|Hs108|chr5 ( 716) 1786 299.6 1.2e-80
CCDS4115.1 TRIM36 gene_id:55521|Hs108|chr5 ( 728) 1779 298.5 2.6e-80
CCDS78047.1 TRIM36 gene_id:55521|Hs108|chr5 ( 573) 1500 253.4 7.3e-67
CCDS14138.1 MID1 gene_id:4281|Hs108|chrX ( 667) 591 106.9 1.1e-22
CCDS83391.1 FSD1L gene_id:83856|Hs108|chr9 ( 509) 399 75.9 1.8e-13
CCDS6765.3 FSD1L gene_id:83856|Hs108|chr9 ( 497) 397 75.6 2.2e-13
CCDS47999.1 FSD1L gene_id:83856|Hs108|chr9 ( 530) 396 75.4 2.6e-13
CCDS75870.1 FSD1L gene_id:83856|Hs108|chr9 ( 508) 392 74.8 3.9e-13
CCDS12127.1 FSD1 gene_id:79187|Hs108|chr19 ( 496) 389 74.3 5.3e-13
CCDS82277.1 FSD1 gene_id:79187|Hs108|chr19 ( 437) 387 73.9 6e-13
CCDS273.1 TRIM63 gene_id:84676|Hs108|chr1 ( 353) 363 70.0 7.4e-12
CCDS6185.1 TRIM55 gene_id:84675|Hs108|chr8 ( 452) 358 69.3 1.6e-11
CCDS1746.2 TRIM54 gene_id:57159|Hs108|chr2 ( 358) 356 68.9 1.6e-11
CCDS6187.1 TRIM55 gene_id:84675|Hs108|chr8 ( 540) 358 69.3 1.8e-11
CCDS6184.1 TRIM55 gene_id:84675|Hs108|chr8 ( 548) 358 69.3 1.8e-11
>>CCDS1097.1 TRIM46 gene_id:80128|Hs108|chr1 (759 aa)
initn: 5215 init1: 5215 opt: 5215 Z-score: 4548.7 bits: 852.4 E(32554): 0
Smith-Waterman score: 5215; 100.0% identity (100.0% similar) in 759 aa overlap (1-759:1-759)
10 20 30 40 50 60
pF1KE4 MAEGEDMQTFTSIMDALVRISTSMKNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MAEGEDMQTFTSIMDALVRISTSMKNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LGQQGYIGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LGQQGYIGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 LHPQVIMFPCPACQGDVELGERGLAGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LHPQVIMFPCPACQGDVELGERGLAGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 EATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHKEEVTHYCKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHKEEVTHYCKT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 CQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSLTYILGNQDTVQTQICELEEAVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 CQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSLTYILGNQDTVQTQICELEEAVR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 HTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLARLSAQIQEHRSLLDGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 HTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLARLSAQIQEHRSLLDGS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 GLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEALQTFRPAASSSFRHCQLDVGREMKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEALQTFRPAASSSFRHCQLDVGREMKL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 LTELNFLRVPEAPVIDTQRTFAYDQIFLCWRLPPHSPPAWHYTVEFRRTDVPAQPGPTRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LTELNFLRVPEAPVIDTQRTFAYDQIFLCWRLPPHSPPAWHYTVEFRRTDVPAQPGPTRW
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 QRREEVRGTSALLENPDTGSVYVLRVRGCNKAGYGEYSEDVHLHTPPAPVLHFFLDSRWG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QRREEVRGTSALLENPDTGSVYVLRVRGCNKAGYGEYSEDVHLHTPPAPVLHFFLDSRWG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE4 ASRERLAISKDQRAVRSVPGLPLLLAADRLLTGCHLSVDVVLGDVAVTQGRSYWACAVDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ASRERLAISKDQRAVRSVPGLPLLLAADRLLTGCHLSVDVVLGDVAVTQGRSYWACAVDP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE4 ASYLVKVGVGLESKLQESFQGAPDVISPRYDPDSGHDSGAEDATVEASPPFAFLTIGMGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ASYLVKVGVGLESKLQESFQGAPDVISPRYDPDSGHDSGAEDATVEASPPFAFLTIGMGK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE4 ILLGSGASSNAGLTGRDGPTAGCTVPLPPRLGICLDYERGRVSFLDAVSFRGLLECPLDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ILLGSGASSNAGLTGRDGPTAGCTVPLPPRLGICLDYERGRVSFLDAVSFRGLLECPLDC
670 680 690 700 710 720
730 740 750
pF1KE4 SGPVCPAFCFIGGGAVQLQEPVGTKPERKVTIGGFAKLD
:::::::::::::::::::::::::::::::::::::::
CCDS10 SGPVCPAFCFIGGGAVQLQEPVGTKPERKVTIGGFAKLD
730 740 750
>>CCDS72931.1 TRIM46 gene_id:80128|Hs108|chr1 (746 aa)
initn: 5086 init1: 5086 opt: 5086 Z-score: 4436.4 bits: 831.6 E(32554): 0
Smith-Waterman score: 5086; 100.0% identity (100.0% similar) in 738 aa overlap (22-759:9-746)
10 20 30 40 50 60
pF1KE4 MAEGEDMQTFTSIMDALVRISTSMKNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREV
:::::::::::::::::::::::::::::::::::::::
CCDS72 MGAKGNGLTSMKNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREV
10 20 30 40
70 80 90 100 110 120
pF1KE4 LGQQGYIGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 LGQQGYIGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGA
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 LHPQVIMFPCPACQGDVELGERGLAGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 LHPQVIMFPCPACQGDVELGERGLAGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPL
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE4 EATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHKEEVTHYCKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 EATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHKEEVTHYCKT
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE4 CQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSLTYILGNQDTVQTQICELEEAVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 CQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSLTYILGNQDTVQTQICELEEAVR
230 240 250 260 270 280
310 320 330 340 350 360
pF1KE4 HTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLARLSAQIQEHRSLLDGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 HTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLARLSAQIQEHRSLLDGS
290 300 310 320 330 340
370 380 390 400 410 420
pF1KE4 GLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEALQTFRPAASSSFRHCQLDVGREMKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 GLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEALQTFRPAASSSFRHCQLDVGREMKL
350 360 370 380 390 400
430 440 450 460 470 480
pF1KE4 LTELNFLRVPEAPVIDTQRTFAYDQIFLCWRLPPHSPPAWHYTVEFRRTDVPAQPGPTRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 LTELNFLRVPEAPVIDTQRTFAYDQIFLCWRLPPHSPPAWHYTVEFRRTDVPAQPGPTRW
410 420 430 440 450 460
490 500 510 520 530 540
pF1KE4 QRREEVRGTSALLENPDTGSVYVLRVRGCNKAGYGEYSEDVHLHTPPAPVLHFFLDSRWG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 QRREEVRGTSALLENPDTGSVYVLRVRGCNKAGYGEYSEDVHLHTPPAPVLHFFLDSRWG
470 480 490 500 510 520
550 560 570 580 590 600
pF1KE4 ASRERLAISKDQRAVRSVPGLPLLLAADRLLTGCHLSVDVVLGDVAVTQGRSYWACAVDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 ASRERLAISKDQRAVRSVPGLPLLLAADRLLTGCHLSVDVVLGDVAVTQGRSYWACAVDP
530 540 550 560 570 580
610 620 630 640 650 660
pF1KE4 ASYLVKVGVGLESKLQESFQGAPDVISPRYDPDSGHDSGAEDATVEASPPFAFLTIGMGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 ASYLVKVGVGLESKLQESFQGAPDVISPRYDPDSGHDSGAEDATVEASPPFAFLTIGMGK
590 600 610 620 630 640
670 680 690 700 710 720
pF1KE4 ILLGSGASSNAGLTGRDGPTAGCTVPLPPRLGICLDYERGRVSFLDAVSFRGLLECPLDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 ILLGSGASSNAGLTGRDGPTAGCTVPLPPRLGICLDYERGRVSFLDAVSFRGLLECPLDC
650 660 670 680 690 700
730 740 750
pF1KE4 SGPVCPAFCFIGGGAVQLQEPVGTKPERKVTIGGFAKLD
:::::::::::::::::::::::::::::::::::::::
CCDS72 SGPVCPAFCFIGGGAVQLQEPVGTKPERKVTIGGFAKLD
710 720 730 740
>>CCDS58033.1 TRIM46 gene_id:80128|Hs108|chr1 (736 aa)
initn: 5076 init1: 5076 opt: 5076 Z-score: 4427.8 bits: 830.0 E(32554): 0
Smith-Waterman score: 5076; 100.0% identity (100.0% similar) in 736 aa overlap (24-759:1-736)
10 20 30 40 50 60
pF1KE4 MAEGEDMQTFTSIMDALVRISTSMKNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREV
:::::::::::::::::::::::::::::::::::::
CCDS58 MKNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREV
10 20 30
70 80 90 100 110 120
pF1KE4 LGQQGYIGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LGQQGYIGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGA
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE4 LHPQVIMFPCPACQGDVELGERGLAGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LHPQVIMFPCPACQGDVELGERGLAGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPL
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE4 EATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHKEEVTHYCKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHKEEVTHYCKT
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE4 CQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSLTYILGNQDTVQTQICELEEAVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 CQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSLTYILGNQDTVQTQICELEEAVR
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE4 HTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLARLSAQIQEHRSLLDGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 HTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLARLSAQIQEHRSLLDGS
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE4 GLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEALQTFRPAASSSFRHCQLDVGREMKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEALQTFRPAASSSFRHCQLDVGREMKL
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE4 LTELNFLRVPEAPVIDTQRTFAYDQIFLCWRLPPHSPPAWHYTVEFRRTDVPAQPGPTRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LTELNFLRVPEAPVIDTQRTFAYDQIFLCWRLPPHSPPAWHYTVEFRRTDVPAQPGPTRW
400 410 420 430 440 450
490 500 510 520 530 540
pF1KE4 QRREEVRGTSALLENPDTGSVYVLRVRGCNKAGYGEYSEDVHLHTPPAPVLHFFLDSRWG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QRREEVRGTSALLENPDTGSVYVLRVRGCNKAGYGEYSEDVHLHTPPAPVLHFFLDSRWG
460 470 480 490 500 510
550 560 570 580 590 600
pF1KE4 ASRERLAISKDQRAVRSVPGLPLLLAADRLLTGCHLSVDVVLGDVAVTQGRSYWACAVDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ASRERLAISKDQRAVRSVPGLPLLLAADRLLTGCHLSVDVVLGDVAVTQGRSYWACAVDP
520 530 540 550 560 570
610 620 630 640 650 660
pF1KE4 ASYLVKVGVGLESKLQESFQGAPDVISPRYDPDSGHDSGAEDATVEASPPFAFLTIGMGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ASYLVKVGVGLESKLQESFQGAPDVISPRYDPDSGHDSGAEDATVEASPPFAFLTIGMGK
580 590 600 610 620 630
670 680 690 700 710 720
pF1KE4 ILLGSGASSNAGLTGRDGPTAGCTVPLPPRLGICLDYERGRVSFLDAVSFRGLLECPLDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ILLGSGASSNAGLTGRDGPTAGCTVPLPPRLGICLDYERGRVSFLDAVSFRGLLECPLDC
640 650 660 670 680 690
730 740 750
pF1KE4 SGPVCPAFCFIGGGAVQLQEPVGTKPERKVTIGGFAKLD
:::::::::::::::::::::::::::::::::::::::
CCDS58 SGPVCPAFCFIGGGAVQLQEPVGTKPERKVTIGGFAKLD
700 710 720 730
>>CCDS72932.1 TRIM46 gene_id:80128|Hs108|chr1 (633 aa)
initn: 4347 init1: 4347 opt: 4347 Z-score: 3793.6 bits: 712.4 E(32554): 5.5e-205
Smith-Waterman score: 4347; 100.0% identity (100.0% similar) in 633 aa overlap (127-759:1-633)
100 110 120 130 140 150
pF1KE4 PKPDRLDRLLKSGFGTYPGRKRGALHPQVIMFPCPACQGDVELGERGLAGLFRNLTLERV
::::::::::::::::::::::::::::::
CCDS72 MFPCPACQGDVELGERGLAGLFRNLTLERV
10 20 30
160 170 180 190 200 210
pF1KE4 VERYRQSVSVGGAILCQLCKPPPLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 VERYRQSVSVGGAILCQLCKPPPLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLP
40 50 60 70 80 90
220 230 240 250 260 270
pF1KE4 TLSFRPKGLMCPDHKEEVTHYCKTCQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 TLSFRPKGLMCPDHKEEVTHYCKTCQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTK
100 110 120 130 140 150
280 290 300 310 320 330
pF1KE4 SLTYILGNQDTVQTQICELEEAVRHTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 SLTYILGNQDTVQTQICELEEAVRHTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIE
160 170 180 190 200 210
340 350 360 370 380 390
pF1KE4 ECQQERLARLSAQIQEHRSLLDGSGLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 ECQQERLARLSAQIQEHRSLLDGSGLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEAL
220 230 240 250 260 270
400 410 420 430 440 450
pF1KE4 QTFRPAASSSFRHCQLDVGREMKLLTELNFLRVPEAPVIDTQRTFAYDQIFLCWRLPPHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 QTFRPAASSSFRHCQLDVGREMKLLTELNFLRVPEAPVIDTQRTFAYDQIFLCWRLPPHS
280 290 300 310 320 330
460 470 480 490 500 510
pF1KE4 PPAWHYTVEFRRTDVPAQPGPTRWQRREEVRGTSALLENPDTGSVYVLRVRGCNKAGYGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 PPAWHYTVEFRRTDVPAQPGPTRWQRREEVRGTSALLENPDTGSVYVLRVRGCNKAGYGE
340 350 360 370 380 390
520 530 540 550 560 570
pF1KE4 YSEDVHLHTPPAPVLHFFLDSRWGASRERLAISKDQRAVRSVPGLPLLLAADRLLTGCHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 YSEDVHLHTPPAPVLHFFLDSRWGASRERLAISKDQRAVRSVPGLPLLLAADRLLTGCHL
400 410 420 430 440 450
580 590 600 610 620 630
pF1KE4 SVDVVLGDVAVTQGRSYWACAVDPASYLVKVGVGLESKLQESFQGAPDVISPRYDPDSGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 SVDVVLGDVAVTQGRSYWACAVDPASYLVKVGVGLESKLQESFQGAPDVISPRYDPDSGH
460 470 480 490 500 510
640 650 660 670 680 690
pF1KE4 DSGAEDATVEASPPFAFLTIGMGKILLGSGASSNAGLTGRDGPTAGCTVPLPPRLGICLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 DSGAEDATVEASPPFAFLTIGMGKILLGSGASSNAGLTGRDGPTAGCTVPLPPRLGICLD
520 530 540 550 560 570
700 710 720 730 740 750
pF1KE4 YERGRVSFLDAVSFRGLLECPLDCSGPVCPAFCFIGGGAVQLQEPVGTKPERKVTIGGFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 YERGRVSFLDAVSFRGLLECPLDCSGPVCPAFCFIGGGAVQLQEPVGTKPERKVTIGGFA
580 590 600 610 620 630
pF1KE4 KLD
:::
CCDS72 KLD
>>CCDS60285.1 TRIM46 gene_id:80128|Hs108|chr1 (551 aa)
initn: 3647 init1: 3647 opt: 3649 Z-score: 3186.4 bits: 599.8 E(32554): 3.7e-171
Smith-Waterman score: 3649; 98.5% identity (98.9% similar) in 541 aa overlap (1-541:1-540)
10 20 30 40 50 60
pF1KE4 MAEGEDMQTFTSIMDALVRISTSMKNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 MAEGEDMQTFTSIMDALVRISTSMKNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LGQQGYIGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 LGQQGYIGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 LHPQVIMFPCPACQGDVELGERGLAGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 LHPQVIMFPCPACQGDVELGERGLAGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 EATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHKEEVTHYCKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 EATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHKEEVTHYCKT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 CQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSLTYILGNQDTVQTQICELEEAVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 CQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSLTYILGNQDTVQTQICELEEAVR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 HTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLARLSAQIQEHRSLLDGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 HTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLARLSAQIQEHRSLLDGS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 GLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEALQTFRPAASSSFRHCQLDVGREMKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 GLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEALQTFRPAASSSFRHCQLDVGREMKL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 LTELNFLRVPEAPVIDTQRTFAYDQIFLCWRLPPHSPPAWHYTVEFRRTDVPAQPGPTRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 LTELNFLRVPEAPVIDTQRTFAYDQIFLCWRLPPHSPPAWHYTVEFRRTDVPAQPGPTRW
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 QRREEVRGTSALLENPDTGSVYVLRVRGCNKAGYGEYSEDVHLHTPPAPVLHFFLDSRWG
::::::::::::::::::::::::::::::::::::::::::::::::: .. : : :
CCDS60 QRREEVRGTSALLENPDTGSVYVLRVRGCNKAGYGEYSEDVHLHTPPAPGIQN-LARRGG
490 500 510 520 530
550 560 570 580 590 600
pF1KE4 ASRERLAISKDQRAVRSVPGLPLLLAADRLLTGCHLSVDVVLGDVAVTQGRSYWACAVDP
:
CCDS60 ACLQFQLLGRLR
540 550
>>CCDS75287.1 TRIM36 gene_id:55521|Hs108|chr5 (716 aa)
initn: 1456 init1: 626 opt: 1786 Z-score: 1561.6 bits: 299.6 E(32554): 1.2e-80
Smith-Waterman score: 2103; 42.8% identity (75.4% similar) in 727 aa overlap (23-745:11-708)
10 20 30 40 50 60
pF1KE4 MAEGEDMQTFTSIMDALVRISTSMKNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREV
..::.:.::.::.:.:.. .::.::: :..:. :..:.
CCDS75 MEGDGSDSPVTIKNIERELICPACKELFTHPLILPCQHSICHKCVKEL
10 20 30 40
70 80 90 100 110
pF1KE4 LG--QQGYIGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKR
: .... :.: :.. :.: : : :. :..::. . :: ::
CCDS75 LLTLDDSFNDVGSDNSNQ-----SSPRLRLPS------PSMDKIDRI------NRPGWKR
50 60 70 80 90
120 130 140 150 160 170
pF1KE4 GALHPQVIMFPCPACQGDVELGERGLAGLFRNLTLERVVERYRQSVSVGGAILCQLCKPP
..: :.. .::::.:. ::.:::::. :::::.::: .::::::.. .. ::.:.:::::
CCDS75 NSLTPRTTVFPCPGCEHDVDLGERGINGLFRNFTLETIVERYRQAARAATAIMCDLCKPP
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE4 PLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHK-EEVTHY
: :.::.: .: :..::::::. ::::: ::::: . :: .:::: ::::.:. :... :
CCDS75 PQESTKSCMDCSASYCNECFKIHHPWGTIKAQHEYVGPTTNFRPKILMCPEHETERINMY
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE4 CKTCQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSLTYILGNQDTVQTQICELEE
:. :.: ::.::.. .:..:..: . :::..::.::.:.. :..:... :..:: ::.
CCDS75 CELCRRPVCHLCKLGGNHANHRVTTMSSAYKTLKEKLSKDIDYLIGKESQVKSQISELNL
220 230 240 250 260 270
300 310 320 330 340 350
pF1KE4 AVRHTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLARLSAQIQEHRSLL
...:: .:..::::. . : ::::...:.:.::. .. :: ....:..:...::
CCDS75 LMKETECNGERAKEEAITHFEKLFEVLEERKSSVLKAIDSSKKLRLDKFQTQMEEYQGLL
280 290 300 310 320 330
360 370 380 390 400 410
pF1KE4 DGSGLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEALQTFRPAASSSFRHCQLDVGRE
...::::::::::::::: ::::.::::: :: .:::.:..:::::..::. ......
CCDS75 ENNGLVGYAQEVLKETDQSCFVQTAKQLHLRIQKATESLKSFRPAAQTSFEDYVVNTSKQ
340 350 360 370 380 390
420 430 440 450 460 470
pF1KE4 MKLLTELNFLRVP-EAPVIDTQRTFAYDQIFLCWRLPPHSPPAWHYTVEFRRTDVPAQPG
.:: ::.:. ..: :. ... .:.. .. :. :.. : :..:.:. . .
CCDS75 TELLGELSFFSSGIDVPEINEEQSKVYNNALINWH-HPEKDKADSYVLEYRKIN---RDD
400 410 420 430 440
480 490 500 510 520 530
pF1KE4 PTRWQRREEVRGTSALLENPDTGSVYVLRVRGCNKAGYGEYSEDVHLHTPPAPVLHFFLD
:.. : : ::: .... ...:.:..:::. . . . :... ::::::::. :..:
CCDS75 EMSWNEIE-VCGTSKIIQDLENSSTYAFRVRAYKGSICSPCSRELILHTPPAPVFSFLFD
450 460 470 480 490 500
540 550 560 570 580 590
pF1KE4 SRWGASRERLAISKDQRAVRSVPGLPLLLAADRLLTGCHLSVDVVLGDVAVTQGRSYWAC
. : . :.: .. . :.: :. :::::.:. .: . :.: ..::...:.:. .::
CCDS75 EKCGYNNEHLLLNLKRDRVESRAGFNLLLAAERIQVGYYTSLDYIIGDTGITKGKHFWAF
510 520 530 540 550 560
600 610 620 630 640 650
pF1KE4 AVDPASYLVKVGVGLESKLQESFQGAPDVISPRYDPDSGHDSGAEDATVEASPPFAFLTI
:.: ::::::::. .:::: ... :..::::. :::::::.::: ..: ::...::
CCDS75 RVEPYSYLVKVGVASSDKLQEWLRSPRDAVSPRYEQDSGHDSGSEDACFDSSQPFTLVTI
570 580 590 600 610 620
660 670 680 690 700 710
pF1KE4 GMGKILLGSGASSNAGLTGRDGPTAGCTVPLPPRLGICLDYERGRVSFLDAVSFRGLLEC
:: :... .. .:. .: ..:.: .:: :: ..:.:.: : ... : :
CCDS75 GMQKFFIPKSPTSSNEPENR-------VLPMPTSIGIFLDCDKGKVDFYDMDQMKCLYER
630 640 650 660 670
720 730 740 750
pF1KE4 PLDCSGPVCPAFCFIGGGAVQLQEPVGTKPERKVTIGGFAKLD
.::: . ::: ..:.:..::.::. .:
CCDS75 QVDCSHTLYPAFALMGSGGIQLEEPITAKYLEYQEDM
680 690 700 710
>>CCDS4115.1 TRIM36 gene_id:55521|Hs108|chr5 (728 aa)
initn: 1473 init1: 626 opt: 1779 Z-score: 1555.4 bits: 298.5 E(32554): 2.6e-80
Smith-Waterman score: 2139; 42.3% identity (75.3% similar) in 749 aa overlap (1-745:1-720)
10 20 30 40 50 60
pF1KE4 MAEGEDMQTFTSIMDALVRISTSMKNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREV
:.:. .:. : ::. ... ....::.:.::.::.:.:.. .::.::: :..:. :..:.
CCDS41 MSESGEMSEFGYIMELIAKGKVTIKNIERELICPACKELFTHPLILPCQHSICHKCVKEL
10 20 30 40 50 60
70 80 90 100 110
pF1KE4 LG--QQGYIGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKR
: .... :.: :.. :.: : : :. :..::. . :: ::
CCDS41 LLTLDDSFNDVGSDNSNQ-----SSPRLRLPS------PSMDKIDRI------NRPGWKR
70 80 90 100
120 130 140 150 160 170
pF1KE4 GALHPQVIMFPCPACQGDVELGERGLAGLFRNLTLERVVERYRQSVSVGGAILCQLCKPP
..: :.. .::::.:. ::.:::::. :::::.::: .::::::.. .. ::.:.:::::
CCDS41 NSLTPRTTVFPCPGCEHDVDLGERGINGLFRNFTLETIVERYRQAARAATAIMCDLCKPP
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE4 PLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHK-EEVTHY
: :.::.: .: :..::::::. ::::: ::::: . :: .:::: ::::.:. :... :
CCDS41 PQESTKSCMDCSASYCNECFKIHHPWGTIKAQHEYVGPTTNFRPKILMCPEHETERINMY
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE4 CKTCQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSLTYILGNQDTVQTQICELEE
:. :.: ::.::.. .:..:..: . :::..::.::.:.. :..:... :..:: ::.
CCDS41 CELCRRPVCHLCKLGGNHANHRVTTMSSAYKTLKEKLSKDIDYLIGKESQVKSQISELNL
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE4 AVRHTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLARLSAQIQEHRSLL
...:: .:..::::. . : ::::...:.:.::. .. :: ....:..:...::
CCDS41 LMKETECNGERAKEEAITHFEKLFEVLEERKSSVLKAIDSSKKLRLDKFQTQMEEYQGLL
290 300 310 320 330 340
360 370 380 390 400 410
pF1KE4 DGSGLVGYAQEVLKETDQPCFVQAAKQLHNRIARATEALQTFRPAASSSFRHCQLDVGRE
...::::::::::::::: ::::.::::: :: .:::.:..:::::..::. ......
CCDS41 ENNGLVGYAQEVLKETDQSCFVQTAKQLHLRIQKATESLKSFRPAAQTSFEDYVVNTSKQ
350 360 370 380 390 400
420 430 440 450 460 470
pF1KE4 MKLLTELNFLRVP-EAPVIDTQRTFAYDQIFLCWRLPPHSPPAWHYTVEFRRTDVPAQPG
.:: ::.:. ..: :. ... .:.. .. :. :.. : :..:.:. . .
CCDS41 TELLGELSFFSSGIDVPEINEEQSKVYNNALINWH-HPEKDKADSYVLEYRKIN---RDD
410 420 430 440 450
480 490 500 510 520 530
pF1KE4 PTRWQRREEVRGTSALLENPDTGSVYVLRVRGCNKAGYGEYSEDVHLHTPPAPVLHFFLD
:.. : : ::: .... ...:.:..:::. . . . :... ::::::::. :..:
CCDS41 EMSWNEIE-VCGTSKIIQDLENSSTYAFRVRAYKGSICSPCSRELILHTPPAPVFSFLFD
460 470 480 490 500 510
540 550 560 570 580 590
pF1KE4 SRWGASRERLAISKDQRAVRSVPGLPLLLAADRLLTGCHLSVDVVLGDVAVTQGRSYWAC
. : . :.: .. . :.: :. :::::.:. .: . :.: ..::...:.:. .::
CCDS41 EKCGYNNEHLLLNLKRDRVESRAGFNLLLAAERIQVGYYTSLDYIIGDTGITKGKHFWAF
520 530 540 550 560 570
600 610 620 630 640 650
pF1KE4 AVDPASYLVKVGVGLESKLQESFQGAPDVISPRYDPDSGHDSGAEDATVEASPPFAFLTI
:.: ::::::::. .:::: ... :..::::. :::::::.::: ..: ::...::
CCDS41 RVEPYSYLVKVGVASSDKLQEWLRSPRDAVSPRYEQDSGHDSGSEDACFDSSQPFTLVTI
580 590 600 610 620 630
660 670 680 690 700 710
pF1KE4 GMGKILLGSGASSNAGLTGRDGPTAGCTVPLPPRLGICLDYERGRVSFLDAVSFRGLLEC
:: :... .. .:. .: ..:.: .:: :: ..:.:.: : ... : :
CCDS41 GMQKFFIPKSPTSSNEPENR-------VLPMPTSIGIFLDCDKGKVDFYDMDQMKCLYER
640 650 660 670 680 690
720 730 740 750
pF1KE4 PLDCSGPVCPAFCFIGGGAVQLQEPVGTKPERKVTIGGFAKLD
.::: . ::: ..:.:..::.::. .:
CCDS41 QVDCSHTLYPAFALMGSGGIQLEEPITAKYLEYQEDM
700 710 720
>>CCDS78047.1 TRIM36 gene_id:55521|Hs108|chr5 (573 aa)
initn: 1280 init1: 626 opt: 1500 Z-score: 1313.9 bits: 253.4 E(32554): 7.3e-67
Smith-Waterman score: 1659; 42.8% identity (76.1% similar) in 577 aa overlap (171-745:1-565)
150 160 170 180 190 200
pF1KE4 ERGLAGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPLEATKGCTECRATFCNECFKL
.:.:::::: :.::.: .: :..::::::.
CCDS78 MCDLCKPPPQESTKSCMDCSASYCNECFKI
10 20 30
210 220 230 240 250
pF1KE4 FHPWGTQKAQHEPTLPTLSFRPKGLMCPDHK-EEVTHYCKTCQRLVCQLCRVRRTHSGHK
::::: ::::: . :: .:::: ::::.:. :... ::. :.: ::.::.. .:..:.
CCDS78 HHPWGTIKAQHEYVGPTTNFRPKILMCPEHETERINMYCELCRRPVCHLCKLGGNHANHR
40 50 60 70 80 90
260 270 280 290 300 310
pF1KE4 ITPVLSAYQALKDKLTKSLTYILGNQDTVQTQICELEEAVRHTEVSGQQAKEEVSQLVRG
.: . :::..::.::.:.. :..:... :..:: ::. ...:: .:..::::. .
CCDS78 VTTMSSAYKTLKEKLSKDIDYLIGKESQVKSQISELNLLMKETECNGERAKEEAITHFEK
100 110 120 130 140 150
320 330 340 350 360 370
pF1KE4 LGAVLEEKRASLLQAIEECQQERLARLSAQIQEHRSLLDGSGLVGYAQEVLKETDQPCFV
: ::::...:.:.::. .. :: ....:..:...::...::::::::::::::: :::
CCDS78 LFEVLEERKSSVLKAIDSSKKLRLDKFQTQMEEYQGLLENNGLVGYAQEVLKETDQSCFV
160 170 180 190 200 210
380 390 400 410 420 430
pF1KE4 QAAKQLHNRIARATEALQTFRPAASSSFRHCQLDVGREMKLLTELNFLRVP-EAPVIDTQ
:.::::: :: .:::.:..:::::..::. ...... .:: ::.:. ..: :. .
CCDS78 QTAKQLHLRIQKATESLKSFRPAAQTSFEDYVVNTSKQTELLGELSFFSSGIDVPEINEE
220 230 240 250 260 270
440 450 460 470 480 490
pF1KE4 RTFAYDQIFLCWRLPPHSPPAWHYTVEFRRTDVPAQPGPTRWQRREEVRGTSALLENPDT
.. .:.. .. :. :.. : :..:.:. . . :.. : : ::: .... ..
CCDS78 QSKVYNNALINWH-HPEKDKADSYVLEYRKIN---RDDEMSWNEIE-VCGTSKIIQDLEN
280 290 300 310 320
500 510 520 530 540 550
pF1KE4 GSVYVLRVRGCNKAGYGEYSEDVHLHTPPAPVLHFFLDSRWGASRERLAISKDQRAVRSV
.:.:..:::. . . . :... ::::::::. :..: . : . :.: .. . :.:
CCDS78 SSTYAFRVRAYKGSICSPCSRELILHTPPAPVFSFLFDEKCGYNNEHLLLNLKRDRVESR
330 340 350 360 370 380
560 570 580 590 600 610
pF1KE4 PGLPLLLAADRLLTGCHLSVDVVLGDVAVTQGRSYWACAVDPASYLVKVGVGLESKLQES
:. :::::.:. .: . :.: ..::...:.:. .:: :.: ::::::::. .::::
CCDS78 AGFNLLLAAERIQVGYYTSLDYIIGDTGITKGKHFWAFRVEPYSYLVKVGVASSDKLQEW
390 400 410 420 430 440
620 630 640 650 660 670
pF1KE4 FQGAPDVISPRYDPDSGHDSGAEDATVEASPPFAFLTIGMGKILLGSGASSNAGLTGRDG
... :..::::. :::::::.::: ..: ::...:::: :... .. .:. .:
CCDS78 LRSPRDAVSPRYEQDSGHDSGSEDACFDSSQPFTLVTIGMQKFFIPKSPTSSNEPENR--
450 460 470 480 490 500
680 690 700 710 720 730
pF1KE4 PTAGCTVPLPPRLGICLDYERGRVSFLDAVSFRGLLECPLDCSGPVCPAFCFIGGGAVQL
..:.: .:: :: ..:.:.: : ... : : .::: . ::: ..:.:..::
CCDS78 -----VLPMPTSIGIFLDCDKGKVDFYDMDQMKCLYERQVDCSHTLYPAFALMGSGGIQL
510 520 530 540 550
740 750
pF1KE4 QEPVGTKPERKVTIGGFAKLD
.::. .:
CCDS78 EEPITAKYLEYQEDM
560 570
>>CCDS14138.1 MID1 gene_id:4281|Hs108|chrX (667 aa)
initn: 718 init1: 184 opt: 591 Z-score: 521.0 bits: 106.9 E(32554): 1.1e-22
Smith-Waterman score: 760; 25.1% identity (55.1% similar) in 738 aa overlap (24-728:1-641)
10 20 30 40 50 60
pF1KE4 MAEGEDMQTFTSIMDALVRISTSMKNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREV
:...:.:: ::.: :....::.:::.:..: ::...
CCDS14 METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRI
10 20 30
70 80 90 100 110 120
pF1KE4 LGQQGYIGHGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGA
: ..: :.. :..:
CCDS14 L-----VSHC----------ATNESVES--------------------------------
40 50
130 140 150 160
pF1KE4 LHPQVIMFPCPACQGDVELGERGLAGLFRNLTLERVVERYRQSVSVGGA-----------
. : ::.:. . :..::: :: ::.::. ...:. :..::.:
CCDS14 ----ITAFQCPTCRHVITLSQRGLDGLKRNVTLQNIIDRF-QKASVSGPNSPSETRRERA
60 70 80 90 100
170 180 190 200 210
pF1KE4 -----------ILCQLC-KPPPLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPT
.:::.: . : .:.: :. :....:.::.: :: . :. :
CCDS14 FDANTMTSAEKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPI
110 120 130 140 150 160
220 230 240 250 260 270
pF1KE4 LSFRPKGLMCPDHKEE-VTHYCKTCQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTK
. . .:::: .:..: :. :: : ..:.: ::.. : :... . :. ::..: .
CCDS14 PDSHIRGLMCLEHEDEKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLES
170 180 190 200 210 220
280 290 300 310 320 330
pF1KE4 SLTYILGNQDTVQTQICELEEAVRHTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIE
.:: .. . ..: . .: .. .:.::.... . .... : .....: . :.
CCDS14 NLTNLIKRNTELETLLAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKIK
230 240 250 260 270 280
340 350 360 370 380 390
pF1KE4 ECQQERLARLSAQIQEHRSLLDGSG-LVGYAQEVLKETDQPCFVQAAKQLHNRIARATEA
: . :: .:. :: . .. .. :. :.. :.. :::.:. :.:.::.. .:.. :: .
CCDS14 EGKVMRLRKLAQQIANCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATAS
290 300 310 320 330 340
400 410 420 430 440 450
pF1KE4 LQTFRPAAS--SSFRHCQLDVGREMKLLTELNFLRVPEAPVIDTQR-TFAYDQIFLCWRL
:.. : . ..: :: .:: ::: :..: .:. :.: . : .:: : . :
CCDS14 SQVLIPEINLNDTFDTFALDFSREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTS
350 360 370 380 390 400
460 470 480 490 500
pF1KE4 PPH-SPPAW--HYTVEFRRTDVPAQ-PGPTRWQRREEVRGTSALLENPDTGSVYVLRVRG
. : .. .::. ...: . . :. ... . ... ..:. :.. :..
CCDS14 DDEFSVVSYELQYTIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFMVKA
410 420 430 440 450 460
510 520 530 540 550 560
pF1KE4 CNKAGYGEYSEDVHLHTPPAPVLHFFLDSRWGASRERLAISKDQRAV-RSVPGLPLLLAA
:.:: .. :: .:.: : : :: . .....: .:.:. .: :. . .
CCDS14 INQAG-SRSSEPGKLKTNSQP---FKLDPK--SAHRKLKVSHDNLTVERDESSSKKSHTP
470 480 490 500 510
570 580 590 600 610 620
pF1KE4 DRLLTGCHLSVDVVLGDVAVTQGRSYWACAVDPASYLVKVGVGLESKLQESFQGAPDVIS
.:. . .: :.: . .:: :: ... ... ..:: ....::
CCDS14 ERFTSQGSYGV---AGNVFIDSGRHYWEVVISGSTW---YAIGL------AYKSAPK---
520 530 540 550 560
630 640 650 660 670 680
pF1KE4 PRYDPDSGHDSGAEDATVEASPPFAFLTIGMGKILLGSGASSNAGLTGRDGPTAGCTVPL
:. ... : .:. . . .. .. .. : .:
CCDS14 --------HEWIGKN-----SASWALCRCNNNWVVRHNS---------KEIPIE--PAPH
570 580 590 600
690 700 710 720 730 740
pF1KE4 PPRLGICLDYERGRVSFLDAVSFRGLLECPLDCSGPVCPAFCFIGGGAVQLQEPVGTKPE
:.:: :::. : ..: ::.. : . . ::::.:
CCDS14 LRRVGILLDYDNGSIAFYDALNSIHLYTFDVAFAQPVCPTFTVWNKCLTIITGLPIPDHL
610 620 630 640 650 660
750
pF1KE4 RKVTIGGFAKLD
CCDS14 DCTEQLP
>>CCDS83391.1 FSD1L gene_id:83856|Hs108|chr9 (509 aa)
initn: 322 init1: 105 opt: 399 Z-score: 355.4 bits: 75.9 E(32554): 1.8e-13
Smith-Waterman score: 423; 24.5% identity (56.6% similar) in 511 aa overlap (271-753:5-495)
250 260 270 280 290 300
pF1KE4 CQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSLTYILGNQDTVQTQICELEEAVR
:. : . .. . ...: .:. : :.....
CCDS83 MDSQKEALQRIISTLANKNDEIQNFIDTLHHTLK
10 20 30
310 320 330 340 350 360
pF1KE4 HTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLARLSAQIQEHRSLLDGS
.. .... :... .: ..:.: . :... :.. : .. .:..::.. . :..:
CCDS83 GVQENSSNILSELDEEFDSLYSILDEVKESMINCIKQEQARKSQELQSQISQCNNALENS
40 50 60 70 80 90
370 380 390 400 410
pF1KE4 G-LVGYAQEVLKETDQPCFVQAAKQLHNRIARATEALQTFRPAASSSFRHCQLDVGREMK
:. .: . : . : .::.:...:.. :. ...: .:... : ..: ..: .
CCDS83 EELLEFATRSLDIKEPEEFSKAARQIKDRVTMASAFRLSLKPKVSDNMTHLMVDFSQERQ
100 110 120 130 140 150
420 430 440 450 460 470
pF1KE4 LLTELNFLRVPEAPVIDTQRTFAYDQ-IFLCWRLPPHSPPAWHYTVEFRRTDVPAQP--G
.: :.:: ::.:: :: . .. :. . . ::.: .. :. .: :.:. . :
CCDS83 MLQTLKFLPVPKAPEIDPVECLVADNSVTVAWRMPEEDNKIDHFILEHRKTNFDGLPRVK
160 170 180 190 200 210
480 490 500 510 520 530
pF1KE4 PTR-WQRREEVRGTSALLENPDTGSVYV-LRVRGCNKAGYGEYSEDVHLHTPPAPVLHFF
: :. ....:: : . : :. .:::.:::: ::::. : :.: .:.:
CCDS83 DERCWEIIDNIKGTEYTLSGLKFDSKYMNFRVRACNKAVAGEYSDPVTLETK---ALNFN
220 230 240 250 260 270
540 550 560 570 580 590
pF1KE4 LDSRWGASRERLAISKDQRAVRSVPGLPLLLAADRLLTGCHLSVDVVLGDVAVTQGRSYW
::. : .: .. .. :. : . . . : . . :.: ::. ...
CCDS83 LDN----SSSHLNLKVEDTCVEWDPTGGK--GQESKIKGKENK-----GSVHVTSLKKHT
280 290 300 310 320
600 610 620 630 640 650
pF1KE4 ACAVDPASYLVKVGVGLESKLQESFQGAPDVISPR-YD--PDSGHDSGAEDATVEASPPF
.. :. ..:: :. . .:. : .. . : :.. .:: . :.:.
CCDS83 RSGT-PSPKRTSVG----SR-PPAVRGSRDRFTGESYTVLGDTAIESGQHYWEVKAQKDC
330 340 350 360 370
660 670 680 690
pF1KE4 AFLTIG-----MGKI-LLGSGASS----------NAGLTGRDGPTAGCTVPLPPRLGICL
..: .::. ::. .: :. . ... . . : .: ..:.
CCDS83 KSYSVGVAYKTLGKFDQLGKTNTSWCIHVNNWLQNTFAAKHNNKVKALDVTVPEKIGVFC
380 390 400 410 420 430
700 710 720 730 740 750
pF1KE4 DYERGRVSFLDAVSFRGLLECPLDCSGPVCPAFCFIGGG---AVQLQEPVGTKPERKVTI
:.. :..:: :: : . : . :: :.: :: .. .: : ... .:
CCDS83 DFDGGQLSFYDANSKQLLYSFKTKFTQPVLPGFMVWCGGLSLSTGMQVPSAVRTLQKSEN
440 450 460 470 480 490
pF1KE4 GGFAKLD
:
CCDS83 GMTGSASSLNNVVTQ
500
759 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 16:51:19 2016 done: Mon Nov 7 16:51:20 2016
Total Scan time: 3.990 Total Display time: 0.200
Function used was FASTA [36.3.4 Apr, 2011]