Result of FASTA (ccds) for
pFN21AE4215
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4215, 738 aa
1>>>pF1KE4215 738 - 738 aa - 738 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.9638+/-0.00096; mu= 7.4187+/- 0.057
mean_var=130.2897+/-26.122, 0's: 0 Z-trim(108.8): 24 B-trim: 51 in 1/50
Lambda= 0.112362
statistics sampled from 10463 (10477) to 10463 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.322), width: 16
Scan time: 3.610
The best scores are: opt bits E(32554)
CCDS69642.1 KIAA1958 gene_id:158405|Hs108|chr9 ( 744) 2809 467.1 4.2e-131
CCDS35108.1 KIAA1958 gene_id:158405|Hs108|chr9 ( 716) 2633 438.6 1.6e-122
>>CCDS69642.1 KIAA1958 gene_id:158405|Hs108|chr9 (744 aa)
initn: 2887 init1: 2805 opt: 2809 Z-score: 2467.1 bits: 467.1 E(32554): 4.2e-131
Smith-Waterman score: 2996; 67.9% identity (79.4% similar) in 722 aa overlap (1-674:1-716)
10 20 30 40 50 60
pF1KE4 MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 TATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 TATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DFSYCSEPSELDETVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSIARKRPGVVPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 DFSYCSEPSELDETVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSIARKRPGVVPS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 SLHSSSQTQMVDECSNDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKPQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 SLHSSSQTQMVDECSNDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKPQT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 HAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRPIVQKTARVSLASPNRGPPGTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 HAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRPIVQKTARVSLASPNRGPPGTH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 GTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 GTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPS
310 320 330 340 350 360
370 380 390 400 410
pF1KE4 VNTEPEVSSSQQQPPVAPAITTEATAQCIPDQDERAAELSREQNEKTIRSTQTALRNF-R
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 VNTEPEVSSSQQQPPVAPAITTEATAQCIPDQDERAAELSREQNEKTIRSTQTALRNFPY
370 380 390 400 410 420
420 430
pF1KE4 EFLISKYP---------------------SETR-------------------EIYVIPCK
..:.: . :: .: ::
CCDS69 STKLNKFPVFNINDDLNDLCTSAVSPNTTKATRYALNVWRYWCMTNGLKDHTDITKIPAV
430 440 450 460 470 480
440 450 460 470 480 490
pF1KE4 ELDAYLASFFVDARQKDGSEYEPNSLANYQCGLERYLKEHRYGYSITRDKEFKRSQEALK
.:. : .:.: ....:::.. .:: . ::.: ::. :.::: .. :. : . ::
CCDS69 KLNELLENFYVTVKKSDGSDFLATSLHAIRRGLDRILKNAGVGFSIT-SSTFSSSTKKLK
490 500 510 520 530
500 510 520 530 540 550
pF1KE4 QKQIELRCKG-KGNKPHKSMKLTFADELILRKRGLLSRYNPEGLLNLVWLNNTKAFGHCT
.: : : .: . .. . ....:: . . : :. .: ::. : :.. .. :
CCDS69 EKLWVLSKAGMSGARSRNIVYFSLSDEEEMWQAGCLGDDSPITLLSTVVKYNSQYLNMRT
540 550 560 570 580 590
560 570 580 590 600 610
pF1KE4 GFHGSTLKWGDIRLRVTETGLEYLEWMGQDTGDLNAKTKRGGT---DSRVYATQ-HAPQT
. . : .:::.: . :. : ... ... :.: ...: . .. .
CCDS69 LQEHADLMYGDIELLKDPQNQPYFA----RTDSVKRESRSGSTRVCHGKIYHEHSRGHKQ
600 610 620 630 640 650
620 630 640 650 660 670
pF1KE4 CPV-QDYKEYAQRRPPAMRYEDAPFYLSI-KPVVNLAALHWYNCQALGKNKLAKMVKTMC
:: :: . .:::.. .::::. : ....... ::. : .: .: .: ..
CCDS69 CPYCLLYKYMYIHRPPTQMEAKSPFYLTARKEATDMGSV-WYEEQRMGLRSLRGIVPNLA
660 670 680 690 700 710
680 690 700 710 720 730
pF1KE4 EKGNIPGRKTNFSVYQSCSTLSEAQSNQLVLICNNLSQQAAQSVAGHSNNGNFIVSASYD
.:
CCDS69 KKVKLENCENFTFVSFTQVSRRLGSHSCCQ
720 730 740
>>CCDS35108.1 KIAA1958 gene_id:158405|Hs108|chr9 (716 aa)
initn: 2895 init1: 2633 opt: 2633 Z-score: 2313.2 bits: 438.6 E(32554): 1.6e-122
Smith-Waterman score: 2889; 66.9% identity (80.8% similar) in 694 aa overlap (1-674:1-688)
10 20 30 40 50 60
pF1KE4 MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 TATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 TATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DFSYCSEPSELDETVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSIARKRPGVVPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DFSYCSEPSELDETVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSIARKRPGVVPS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 SLHSSSQTQMVDECSNDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKPQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 SLHSSSQTQMVDECSNDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKPQT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 HAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRPIVQKTARVSLASPNRGPPGTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 HAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRPIVQKTARVSLASPNRGPPGTH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 GTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 GTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPS
310 320 330 340 350 360
370 380 390 400
pF1KE4 VNTEPEVSSSQQQPPVAPAITTEATAQCIPDQDERAAE-----LSREQNE--------KT
:::::::::::::::::::::::::::::: . . . .. . :. .:
CCDS35 VNTEPEVSSSQQQPPVAPAITTEATAQCIPAYSTKLNKFPVFNINDDLNDLCTSAVSPNT
370 380 390 400 410 420
410 420 430 440 450 460
pF1KE4 IRSTQTALRNFREFLISKYPSETREIYVIPCKELDAYLASFFVDARQKDGSEYEPNSLAN
..:. :: .: . ... .. .: :: .:. : .:.: ....:::.. .::
CCDS35 TKATRYALNVWRYWCMTNGLKDHTDITKIPAVKLNELLENFYVTVKKSDGSDFLATSLHA
430 440 450 460 470 480
470 480 490 500 510 520
pF1KE4 YQCGLERYLKEHRYGYSITRDKEFKRSQEALKQKQIELRCKG-KGNKPHKSMKLTFADEL
. ::.: ::. :.::: .. :. : . ::.: : : .: . .. . ....::
CCDS35 IRRGLDRILKNAGVGFSIT-SSTFSSSTKKLKEKLWVLSKAGMSGARSRNIVYFSLSDEE
490 500 510 520 530
530 540 550 560 570 580
pF1KE4 ILRKRGLLSRYNPEGLLNLVWLNNTKAFGHCTGFHGSTLKWGDIRLRVTETGLEYLEWMG
. . : :. .: ::. : :.. .. : . . : .:::.: . :.
CCDS35 EMWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDIELLKDPQNQPYFA---
540 550 560 570 580 590
590 600 610 620 630 640
pF1KE4 QDTGDLNAKTKRGGT---DSRVYATQ-HAPQTCPV-QDYKEYAQRRPPAMRYEDAPFYLS
: ... ... :.: ...: . .. . :: :: . .:::.. .::::.
CCDS35 -RTDSVKRESRSGSTRVCHGKIYHEHSRGHKQCPYCLLYKYMYIHRPPTQMEAKSPFYLT
600 610 620 630 640 650
650 660 670 680 690 700
pF1KE4 I-KPVVNLAALHWYNCQALGKNKLAKMVKTMCEKGNIPGRKTNFSVYQSCSTLSEAQSNQ
: ....... ::. : .: .: .: .. .:
CCDS35 ARKEATDMGSV-WYEEQRMGLRSLRGIVPNLAKKVKLENCENFTFVSFTQVSRRLGSHSC
660 670 680 690 700 710
710 720 730
pF1KE4 LVLICNNLSQQAAQSVAGHSNNGNFIVSASYDSSSDTA
CCDS35 CQ
738 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 01:26:13 2016 done: Sun Nov 6 01:26:14 2016
Total Scan time: 3.610 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]