Result of FASTA (ccds) for
pFN21AE4196
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4196, 706 aa
1>>>pF1KE4196 706 - 706 aa - 706 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1526+/-0.00102; mu= 21.2314+/- 0.061
mean_var=79.0013+/-16.207, 0's: 0 Z-trim(105.6): 19 B-trim: 267 in 1/48
Lambda= 0.144297
statistics sampled from 8487 (8495) to 8487 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.62), E-opt: 0.2 (0.261), width: 16
Scan time: 3.840
The best scores are: opt bits E(32554)
CCDS1083.1 DCST1 gene_id:149095|Hs108|chr1 ( 706) 4802 1009.9 0
CCDS44235.1 DCST1 gene_id:149095|Hs108|chr1 ( 681) 4203 885.2 0
CCDS1082.2 DCST2 gene_id:127579|Hs108|chr1 ( 773) 533 121.2 5.7e-27
>>CCDS1083.1 DCST1 gene_id:149095|Hs108|chr1 (706 aa)
initn: 4802 init1: 4802 opt: 4802 Z-score: 5401.2 bits: 1009.9 E(32554): 0
Smith-Waterman score: 4802; 99.9% identity (100.0% similar) in 706 aa overlap (1-706:1-706)
10 20 30 40 50 60
pF1KE4 MDIKHHQNGTRGQRRKQPHTTVQRLLTWGLPVSCSWFLWRQPGEFPVTALLLGAGAGGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MDIKHHQNGTRGQRRKQPHTTVQRLLTWGLPVSCSWFLWRQPGEFPVTALLLGAGAGGLL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 AIGLFQLLVNPMNIYEEQKIMFLYSLVGLGAMGWGTSPHIRCASLLLVPKMLGKEGRLFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AIGLFQLLVNPMNIYEEQKIMFLYSLVGLGAMGWGTSPHIRCASLLLVPKMLGKEGRLFV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 LGYALAAIYVGPVANLRHNLNNVIASLGCTVELQINNTRAAWRISTAPLRAMFKDLLSSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LGYALAAIYVGPVANLRHNLNNVIASLGCTVELQINNTRAAWRISTAPLRAMFKDLLSSK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 ELLRAETRNISATFEDLDAQVNSETGYTPEDTMDSGETAQGREARQAPASRLHLSTQKMY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ELLRAETRNISATFEDLDAQVNSETGYTPEDTMDSGETAQGREARQAPASRLHLSTQKMY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ELKTKLRCSYVVNQAILSCRRWFDRKHEQCMKHIWVPLLTHLLCLPMKFKFFCGIAKVME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ELKTKLRCSYVVNQAILSCRRWFDRKHEQCMKHIWVPLLTHLLCLPMKFKFFCGIAKVME
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 VWCRNRIPVEGNFGQTYDSLNQSIRGLDGEFSANIDFKEEKQAGVLGLNTSWERVSTEVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 VWCRNRIPVEGNFGQTYDSLNQSIRGLDGEFSANIDFKEEKQAGVLGLNTSWERVSTEVR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 DYVYRQEARLEWALGLLHVLLSCTFLLVLHASFSYMDSYNHDIRFDNIYISTYFCQIDDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DYVYRQEARLEWALGLLHVLLSCTFLLVLHASFSYMDSYNHDIRFDNIYISTYFCQIDDR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE4 RKKLGKRTLLPLRKAEEKTVIFPCKPTIQASEMSNVVRELLETLPILLLLVVLCGLDWAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RKKLGKRTLLPLRKAEEKTVIFPCKPTIQASEMSNVVRELLETLPILLLLVVLCGLDWAL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE4 YSIFDTIRHHSFLQYSFRSSHKLEVKVGGDSLLARLLRKTIGALNTSSETVMESNNMPCL
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
CCDS10 YSIFDTIRHHSFLQYSFRSSHKLEVKVGGDSMLARLLRKTIGALNTSSETVMESNNMPCL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE4 PQPVGLDARAYWRAAVPIGLLVCLCLLQAFGYRLRRVIAAFYFPKREKKRILFLYNDLLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PQPVGLDARAYWRAAVPIGLLVCLCLLQAFGYRLRRVIAAFYFPKREKKRILFLYNDLLK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE4 KRAAFTKLRRAAILRRERQQKAPRHPLADILHRGCPLLRRWLCRRCVVCQAPETPESYVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 KRAAFTKLRRAAILRRERQQKAPRHPLADILHRGCPLLRRWLCRRCVVCQAPETPESYVC
610 620 630 640 650 660
670 680 690 700
pF1KE4 RTLDCEAVYCWSCWDDMRQRCPVCTPREELSSSAFSDSNDDTAYAG
::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RTLDCEAVYCWSCWDDMRQRCPVCTPREELSSSAFSDSNDDTAYAG
670 680 690 700
>>CCDS44235.1 DCST1 gene_id:149095|Hs108|chr1 (681 aa)
initn: 4203 init1: 4203 opt: 4203 Z-score: 4727.5 bits: 885.2 E(32554): 0
Smith-Waterman score: 4582; 96.3% identity (96.5% similar) in 706 aa overlap (1-706:1-681)
10 20 30 40 50 60
pF1KE4 MDIKHHQNGTRGQRRKQPHTTVQRLLTWGLPVSCSWFLWRQPGEFPVTALLLGAGAGGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MDIKHHQNGTRGQRRKQPHTTVQRLLTWGLPVSCSWFLWRQPGEFPVTALLLGAGAGGLL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 AIGLFQLLVNPMNIYEEQKIMFLYSLVGLGAMGWGTSPHIRCASLLLVPKMLGKEGRLFV
::: ::::::::::::::::::::::::::::::::
CCDS44 AIG-------------------------LGAMGWGTSPHIRCASLLLVPKMLGKEGRLFV
70 80 90
130 140 150 160 170 180
pF1KE4 LGYALAAIYVGPVANLRHNLNNVIASLGCTVELQINNTRAAWRISTAPLRAMFKDLLSSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LGYALAAIYVGPVANLRHNLNNVIASLGCTVELQINNTRAAWRISTAPLRAMFKDLLSSK
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE4 ELLRAETRNISATFEDLDAQVNSETGYTPEDTMDSGETAQGREARQAPASRLHLSTQKMY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ELLRAETRNISATFEDLDAQVNSETGYTPEDTMDSGETAQGREARQAPASRLHLSTQKMY
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE4 ELKTKLRCSYVVNQAILSCRRWFDRKHEQCMKHIWVPLLTHLLCLPMKFKFFCGIAKVME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ELKTKLRCSYVVNQAILSCRRWFDRKHEQCMKHIWVPLLTHLLCLPMKFKFFCGIAKVME
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE4 VWCRNRIPVEGNFGQTYDSLNQSIRGLDGEFSANIDFKEEKQAGVLGLNTSWERVSTEVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VWCRNRIPVEGNFGQTYDSLNQSIRGLDGEFSANIDFKEEKQAGVLGLNTSWERVSTEVR
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE4 DYVYRQEARLEWALGLLHVLLSCTFLLVLHASFSYMDSYNHDIRFDNIYISTYFCQIDDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DYVYRQEARLEWALGLLHVLLSCTFLLVLHASFSYMDSYNHDIRFDNIYISTYFCQIDDR
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE4 RKKLGKRTLLPLRKAEEKTVIFPCKPTIQASEMSNVVRELLETLPILLLLVVLCGLDWAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RKKLGKRTLLPLRKAEEKTVIFPCKPTIQASEMSNVVRELLETLPILLLLVVLCGLDWAL
400 410 420 430 440 450
490 500 510 520 530 540
pF1KE4 YSIFDTIRHHSFLQYSFRSSHKLEVKVGGDSLLARLLRKTIGALNTSSETVMESNNMPCL
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
CCDS44 YSIFDTIRHHSFLQYSFRSSHKLEVKVGGDSMLARLLRKTIGALNTSSETVMESNNMPCL
460 470 480 490 500 510
550 560 570 580 590 600
pF1KE4 PQPVGLDARAYWRAAVPIGLLVCLCLLQAFGYRLRRVIAAFYFPKREKKRILFLYNDLLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PQPVGLDARAYWRAAVPIGLLVCLCLLQAFGYRLRRVIAAFYFPKREKKRILFLYNDLLK
520 530 540 550 560 570
610 620 630 640 650 660
pF1KE4 KRAAFTKLRRAAILRRERQQKAPRHPLADILHRGCPLLRRWLCRRCVVCQAPETPESYVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KRAAFTKLRRAAILRRERQQKAPRHPLADILHRGCPLLRRWLCRRCVVCQAPETPESYVC
580 590 600 610 620 630
670 680 690 700
pF1KE4 RTLDCEAVYCWSCWDDMRQRCPVCTPREELSSSAFSDSNDDTAYAG
::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RTLDCEAVYCWSCWDDMRQRCPVCTPREELSSSAFSDSNDDTAYAG
640 650 660 670 680
>>CCDS1082.2 DCST2 gene_id:127579|Hs108|chr1 (773 aa)
initn: 476 init1: 308 opt: 533 Z-score: 597.7 bits: 121.2 E(32554): 5.7e-27
Smith-Waterman score: 645; 25.8% identity (54.8% similar) in 666 aa overlap (43-684:14-641)
20 30 40 50 60
pF1KE4 QRRKQPHTTVQRLLTWGLPVSCSWFLWRQPGEFPVTALLLGAGAGGLL-------AIGLF
:: : : . ..::. : ::.
CCDS10 MPKVMKDVVHPLGGEEPSMARAVVRSVGGFTLGLSLATAYGLL
10 20 30 40
70 80 90 100 110 120
pF1KE4 QLLVNPMNIYEEQKIMFLYSLVGLGAMGWGTSPHIRCASLLLVPKMLGKEGRLFVLGYAL
.:::. . . .. .:... ..: : : ..: . :::.:. ....:: ..: :.
CCDS10 ELLVEGHSPW--GCLVGTLTLAAFLSLGMGFSRQVRATVLLLLPQAFSRQGRTLLLVAAF
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 AAIYVGPVANLRHNLNNVIASLGCTVELQINNTRAAWRISTAPLRAMFKDLLSSKELLRA
. . :: :: .:.. . ...: .:: .:.: . . . :: . .. . : . :
CCDS10 GLVLQGPCANTLRNFTRASEAVACGAELALNQTAEVLQRAKQPLVSALNKI---KAIAR-
110 120 130 140 150
190 200 210 220 230 240
pF1KE4 ETRNISATFEDLDAQVNSETGYTPEDTMDSGETAQGREARQAPASRLHLSTQKMYELKTK
.:.... . . .. :: : .: :.. ::..
CCDS10 KTKEVADRVRKFFRSI-----------MD-GVKHIARALRNVWQWLLHIGDV--------
160 170 180 190
250 260 270 280 290 300
pF1KE4 LRCSYVVNQAILSCRRWFDRKHEQCMKHIWVPLLTHLLCLPMKFKF-FCGIAKVMEVWCR
:. ... :.: : :: ...:: . .: :: . : ::. .::.:....:.:
CCDS10 --CNSELGNPYLKCARVFDDAKDSCM--MVIPQAYHLCYVLMPFKLALCGLASLVQVFCV
200 210 220 230 240 250
310 320 330 340 350 360
pF1KE4 NRIPVEGNFGQTYDS-LNQSIRGLDGEFSANIDFKEEKQAGVLGLNTSWERVSTEVRDYV
.. . :: . . : . . :: :. .. .. :. . : .:. .... :
CCDS10 IPKYIQPFLRQTIGTPVIQLLNRVRQEFEFNMTATHHFSVD-LNASRSLSQVAMDLHEAV
260 270 280 290 300 310
370 380 390 400 410
pF1KE4 YRQEARLEWALGLLH----VLLSCTFLLVLHASFSYMDSYNHDIRFDNIYISTYFCQIDD
. :.. ::.:. .:: .: .: . :.. ..: .:::::.. : ...
CCDS10 SMKLHRVREALALMGFTTPLLLVLLYLQALFYRYCYLN-WDH---YDNIYITSRFLRMEA
320 330 340 350 360
420 430 440 450 460 470
pF1KE4 RRKKLGKRTLLPLRKAEEKTVIFPCKPTIQASEMSNVVRELLETLPILLLLVVLCGLDWA
:. : :.::: : . : : . .. : . : .. . :::.. : ::.:
CCDS10 VRSTAGLPTVLPLSAHEARRYIPPGSIFLSQWEKFFYILETFNLIRHLLLVLFLVFLDYA
370 380 390 400 410 420
480 490 500 510 520 530
pF1KE4 LYSIFDTIRHHSFLQYSFRSSHKLEVKVGGDSLLARLLRKTIGALNTSSETVMESNNMPC
.. ..: ::. . :: . . : : . . . : ..:... .. . . :
CCDS10 VFWVLDLARHQLQGEIVARSPVLVSLTVEGTGYAGNIYRDLVSAFDVLQQGNISILSRRC
430 440 450 460 470 480
540 550 560 570 580 590
pF1KE4 LPQPVGLDARAYWRAAVPIGLLVCLCLLQAFGYRLRRVIAAFYFPKREKKRILFLYNDLL
: .: :. .: .: :: . :. .. :::::: : :.:.::..:: .::: ::
CCDS10 LLRPSEPDSTGYIVIGVMYGLCFFITLFGSYVSRLRRVICASYYPSREQERISYLYNVLL
490 500 510 520 530 540
600 610 620 630 640 650
pF1KE4 KKRAAF-TKLRRAAILRRERQQKAPRHPLADILHRGCPLL-----RRWLCR-RCVVCQAP
..:. . . :.:. .::. ... : . .: :: : . :: . :. : :
CCDS10 SRRTNLLAALHRS--VRRRAADQGHRSAFL-VLASRCPCLGPFVSHFWLHQAYCLGCGQP
550 560 570 580 590 600
660 670 680 690 700
pF1KE4 ETP---ESYV-CRTLDCEAVYCWSCWDDMRQRCPVCTPREELSSSAFSDSNDDTAYAG
. :. : : : :...:: .:. . . : ::
CCDS10 QDEGDMENTVSCSTPGCQGLYCLTCFRLLDNTCSVCASPLSYQGDLDLELDSSDEEGPQL
610 620 630 640 650 660
CCDS10 WLAAAQRKDPEQAWLLQQQLQEVLGRSLSMESTSESSDLDEEKGPQQRKHGQQPLPEAHQ
670 680 690 700 710 720
706 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 03:22:00 2016 done: Sun Nov 6 03:22:01 2016
Total Scan time: 3.840 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]