Result of FASTA (omim) for
pFN21AE4101
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4101, 471 aa
1>>>pF1KE4101 471 - 471 aa - 471 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.2587+/-0.000508; mu= 23.9616+/- 0.032
mean_var=66.8602+/-13.150, 0's: 0 Z-trim(106.7): 60 B-trim: 0 in 0/50
Lambda= 0.156852
statistics sampled from 14747 (14802) to 14747 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.517), E-opt: 0.2 (0.174), width: 16
Scan time: 7.040
The best scores are: opt bits E(85289)
NP_001035787 (OMIM: 610985) ubiquitin-conjugating ( 471) 3037 697.0 2.9e-200
NP_001248311 (OMIM: 610985) ubiquitin-conjugating ( 449) 2615 601.5 1.5e-171
NP_060784 (OMIM: 610985) ubiquitin-conjugating enz ( 379) 2448 563.6 3.3e-160
NP_001248314 (OMIM: 610985) ubiquitin-conjugating ( 341) 2186 504.3 2.2e-142
NP_001248313 (OMIM: 610985) ubiquitin-conjugating ( 341) 2134 492.5 7.5e-139
XP_016873474 (OMIM: 610985) PREDICTED: ubiquitin-c ( 341) 2134 492.5 7.5e-139
NP_001248312 (OMIM: 610985) ubiquitin-conjugating ( 357) 2026 468.1 1.8e-131
XP_006718318 (OMIM: 610985) PREDICTED: ubiquitin-c ( 248) 1559 362.2 9e-100
XP_011518503 (OMIM: 610985) PREDICTED: ubiquitin-c ( 248) 1559 362.2 9e-100
XP_016873475 (OMIM: 610985) PREDICTED: ubiquitin-c ( 249) 1545 359.1 8.1e-99
NP_001284700 (OMIM: 610985) ubiquitin-conjugating ( 215) 1364 318.0 1.6e-86
NP_006283 (OMIM: 114480,601387) tumor susceptibili ( 390) 566 137.8 5.3e-32
XP_006719137 (OMIM: 150100,614128) PREDICTED: L-la ( 353) 520 127.3 6.8e-29
NP_002291 (OMIM: 150100,614128) L-lactate dehydrog ( 334) 514 125.9 1.7e-28
NP_001167568 (OMIM: 150100,614128) L-lactate dehyd ( 334) 514 125.9 1.7e-28
NP_001302466 (OMIM: 150100,614128) L-lactate dehyd ( 341) 514 125.9 1.7e-28
NP_001158888 (OMIM: 150000,612933) L-lactate dehyd ( 241) 499 122.4 1.4e-27
NP_005557 (OMIM: 150000,612933) L-lactate dehydrog ( 332) 500 122.7 1.5e-27
NP_001158887 (OMIM: 150000,612933) L-lactate dehyd ( 274) 499 122.4 1.5e-27
NP_001158886 (OMIM: 150000,612933) L-lactate dehyd ( 361) 500 122.8 1.6e-27
NP_001248315 (OMIM: 610985) ubiquitin-conjugating ( 199) 486 119.3 9.6e-27
NP_059144 (OMIM: 150150) L-lactate dehydrogenase C ( 332) 487 119.8 1.2e-26
NP_002292 (OMIM: 150150) L-lactate dehydrogenase C ( 332) 487 119.8 1.2e-26
XP_005253165 (OMIM: 114480,601387) PREDICTED: tumo ( 338) 424 105.6 2.3e-22
NP_001128711 (OMIM: 150000,612933) L-lactate dehyd ( 274) 313 80.3 7.2e-15
XP_016873210 (OMIM: 150150) PREDICTED: L-lactate d ( 216) 297 76.6 7.6e-14
XP_016873211 (OMIM: 150150) PREDICTED: L-lactate d ( 216) 297 76.6 7.6e-14
>>NP_001035787 (OMIM: 610985) ubiquitin-conjugating enzy (471 aa)
initn: 3037 init1: 3037 opt: 3037 Z-score: 3716.5 bits: 697.0 E(85289): 2.9e-200
Smith-Waterman score: 3037; 100.0% identity (100.0% similar) in 471 aa overlap (1-471:1-471)
10 20 30 40 50 60
pF1KE4 MEFDCEGLRRLLGKYKFRDLTVEELRNVNVFFPHFKYSMDTYVFKDSSQKDLLNFTGTIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEFDCEGLRRLLGKYKFRDLTVEELRNVNVFFPHFKYSMDTYVFKDSSQKDLLNFTGTIP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 VMYQGNTYNIPIRFWILDSHPFAPPICFLKPTANMGILVGKHVDAQGRIYLPYLQNWSHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VMYQGNTYNIPIRFWILDSHPFAPPICFLKPTANMGILVGKHVDAQGRIYLPYLQNWSHP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 KSVIVGLIKEMIAKFQEELPMYSLSSSDEARQVDLLAYIAKITEGVSDTNSKSWANHENK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSVIVGLIKEMIAKFQEELPMYSLSSSDEARQVDLLAYIAKITEGVSDTNSKSWANHENK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 YVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLTWSGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLTWSGQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 EEVVSHTSQVQLSNRAMELLRVKGQRSWSVGLSVADMVDSIVNNKKKVHSVSALAKGYYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEVVSHTSQVQLSNRAMELLRVKGQRSWSVGLSVADMVDSIVNNKKKVHSVSALAKGYYD
370 380 390 400 410 420
430 440 450 460 470
pF1KE4 INSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSASSIHSLQQQLKL
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSASSIHSLQQQLKL
430 440 450 460 470
>>NP_001248311 (OMIM: 610985) ubiquitin-conjugating enzy (449 aa)
initn: 2880 init1: 2604 opt: 2615 Z-score: 3200.6 bits: 601.5 E(85289): 1.5e-171
Smith-Waterman score: 2840; 95.3% identity (95.3% similar) in 471 aa overlap (1-471:1-449)
10 20 30 40 50 60
pF1KE4 MEFDCEGLRRLLGKYKFRDLTVEELRNVNVFFPHFKYSMDTYVFKDSSQKDLLNFTGTIP
::::::::::::::::::::::::::::::::::::::::::
NP_001 MEFDCEGLRRLLGKYKFRDLTVEELRNVNVFFPHFKYSMDTY------------------
10 20 30 40
70 80 90 100 110 120
pF1KE4 VMYQGNTYNIPIRFWILDSHPFAPPICFLKPTANMGILVGKHVDAQGRIYLPYLQNWSHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ----GNTYNIPIRFWILDSHPFAPPICFLKPTANMGILVGKHVDAQGRIYLPYLQNWSHP
50 60 70 80 90
130 140 150 160 170 180
pF1KE4 KSVIVGLIKEMIAKFQEELPMYSLSSSDEARQVDLLAYIAKITEGVSDTNSKSWANHENK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSVIVGLIKEMIAKFQEELPMYSLSSSDEARQVDLLAYIAKITEGVSDTNSKSWANHENK
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE4 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE4 SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMT
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE4 YVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLTWSGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLTWSGQ
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE4 EEVVSHTSQVQLSNRAMELLRVKGQRSWSVGLSVADMVDSIVNNKKKVHSVSALAKGYYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEVVSHTSQVQLSNRAMELLRVKGQRSWSVGLSVADMVDSIVNNKKKVHSVSALAKGYYD
340 350 360 370 380 390
430 440 450 460 470
pF1KE4 INSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSASSIHSLQQQLKL
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSASSIHSLQQQLKL
400 410 420 430 440
>>NP_060784 (OMIM: 610985) ubiquitin-conjugating enzyme (379 aa)
initn: 2448 init1: 2448 opt: 2448 Z-score: 2997.3 bits: 563.6 E(85289): 3.3e-160
Smith-Waterman score: 2448; 100.0% identity (100.0% similar) in 375 aa overlap (1-375:1-375)
10 20 30 40 50 60
pF1KE4 MEFDCEGLRRLLGKYKFRDLTVEELRNVNVFFPHFKYSMDTYVFKDSSQKDLLNFTGTIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MEFDCEGLRRLLGKYKFRDLTVEELRNVNVFFPHFKYSMDTYVFKDSSQKDLLNFTGTIP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 VMYQGNTYNIPIRFWILDSHPFAPPICFLKPTANMGILVGKHVDAQGRIYLPYLQNWSHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 VMYQGNTYNIPIRFWILDSHPFAPPICFLKPTANMGILVGKHVDAQGRIYLPYLQNWSHP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 KSVIVGLIKEMIAKFQEELPMYSLSSSDEARQVDLLAYIAKITEGVSDTNSKSWANHENK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 KSVIVGLIKEMIAKFQEELPMYSLSSSDEARQVDLLAYIAKITEGVSDTNSKSWANHENK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 YVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLTWSGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 YVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLTWSGQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 EEVVSHTSQVQLSNRAMELLRVKGQRSWSVGLSVADMVDSIVNNKKKVHSVSALAKGYYD
:::::::::::::::
NP_060 EEVVSHTSQVQLSNRDIMI
370
>>NP_001248314 (OMIM: 610985) ubiquitin-conjugating enzy (341 aa)
initn: 2186 init1: 2186 opt: 2186 Z-score: 2677.4 bits: 504.3 E(85289): 2.2e-142
Smith-Waterman score: 2186; 100.0% identity (100.0% similar) in 337 aa overlap (39-375:1-337)
10 20 30 40 50 60
pF1KE4 RRLLGKYKFRDLTVEELRNVNVFFPHFKYSMDTYVFKDSSQKDLLNFTGTIPVMYQGNTY
::::::::::::::::::::::::::::::
NP_001 MDTYVFKDSSQKDLLNFTGTIPVMYQGNTY
10 20 30
70 80 90 100 110 120
pF1KE4 NIPIRFWILDSHPFAPPICFLKPTANMGILVGKHVDAQGRIYLPYLQNWSHPKSVIVGLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NIPIRFWILDSHPFAPPICFLKPTANMGILVGKHVDAQGRIYLPYLQNWSHPKSVIVGLI
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE4 KEMIAKFQEELPMYSLSSSDEARQVDLLAYIAKITEGVSDTNSKSWANHENKTVNKITVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KEMIAKFQEELPMYSLSSSDEARQVDLLAYIAKITEGVSDTNSKSWANHENKTVNKITVV
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE4 GGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDLSASAHSKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDLSASAHSKV
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE4 VIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMTYVTWKLST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMTYVTWKLST
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE4 FPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLTWSGQEEVVSHTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLTWSGQEEVVSHTS
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE4 QVQLSNRAMELLRVKGQRSWSVGLSVADMVDSIVNNKKKVHSVSALAKGYYDINSEVFLS
:::::::
NP_001 QVQLSNRDIMI
340
>>NP_001248313 (OMIM: 610985) ubiquitin-conjugating enzy (341 aa)
initn: 2134 init1: 2134 opt: 2134 Z-score: 2613.8 bits: 492.5 E(85289): 7.5e-139
Smith-Waterman score: 2134; 100.0% identity (100.0% similar) in 341 aa overlap (131-471:1-341)
110 120 130 140 150 160
pF1KE4 KHVDAQGRIYLPYLQNWSHPKSVIVGLIKEMIAKFQEELPMYSLSSSDEARQVDLLAYIA
::::::::::::::::::::::::::::::
NP_001 MIAKFQEELPMYSLSSSDEARQVDLLAYIA
10 20 30
170 180 190 200 210 220
pF1KE4 KITEGVSDTNSKSWANHENKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KITEGVSDTNSKSWANHENKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTK
40 50 60 70 80 90
230 240 250 260 270 280
pF1KE4 GATMDLEIFNLPNVEISKDLSASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GATMDLEIFNLPNVEISKDLSASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPAL
100 110 120 130 140 150
290 300 310 320 330 340
pF1KE4 GHYSQHSVLLVASQPVEIMTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GHYSQHSVLLVASQPVEIMTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSG
160 170 180 190 200 210
350 360 370 380 390 400
pF1KE4 KEVWVIGEQGEDKVLTWSGQEEVVSHTSQVQLSNRAMELLRVKGQRSWSVGLSVADMVDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KEVWVIGEQGEDKVLTWSGQEEVVSHTSQVQLSNRAMELLRVKGQRSWSVGLSVADMVDS
220 230 240 250 260 270
410 420 430 440 450 460
pF1KE4 IVNNKKKVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVNNKKKVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSAS
280 290 300 310 320 330
470
pF1KE4 SIHSLQQQLKL
:::::::::::
NP_001 SIHSLQQQLKL
340
>>XP_016873474 (OMIM: 610985) PREDICTED: ubiquitin-conju (341 aa)
initn: 2134 init1: 2134 opt: 2134 Z-score: 2613.8 bits: 492.5 E(85289): 7.5e-139
Smith-Waterman score: 2134; 100.0% identity (100.0% similar) in 341 aa overlap (131-471:1-341)
110 120 130 140 150 160
pF1KE4 KHVDAQGRIYLPYLQNWSHPKSVIVGLIKEMIAKFQEELPMYSLSSSDEARQVDLLAYIA
::::::::::::::::::::::::::::::
XP_016 MIAKFQEELPMYSLSSSDEARQVDLLAYIA
10 20 30
170 180 190 200 210 220
pF1KE4 KITEGVSDTNSKSWANHENKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KITEGVSDTNSKSWANHENKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTK
40 50 60 70 80 90
230 240 250 260 270 280
pF1KE4 GATMDLEIFNLPNVEISKDLSASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GATMDLEIFNLPNVEISKDLSASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPAL
100 110 120 130 140 150
290 300 310 320 330 340
pF1KE4 GHYSQHSVLLVASQPVEIMTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GHYSQHSVLLVASQPVEIMTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSG
160 170 180 190 200 210
350 360 370 380 390 400
pF1KE4 KEVWVIGEQGEDKVLTWSGQEEVVSHTSQVQLSNRAMELLRVKGQRSWSVGLSVADMVDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEVWVIGEQGEDKVLTWSGQEEVVSHTSQVQLSNRAMELLRVKGQRSWSVGLSVADMVDS
220 230 240 250 260 270
410 420 430 440 450 460
pF1KE4 IVNNKKKVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IVNNKKKVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSAS
280 290 300 310 320 330
470
pF1KE4 SIHSLQQQLKL
:::::::::::
XP_016 SIHSLQQQLKL
340
>>NP_001248312 (OMIM: 610985) ubiquitin-conjugating enzy (357 aa)
initn: 2291 init1: 2015 opt: 2026 Z-score: 2481.5 bits: 468.1 E(85289): 1.8e-131
Smith-Waterman score: 2251; 94.1% identity (94.1% similar) in 375 aa overlap (1-375:1-353)
10 20 30 40 50 60
pF1KE4 MEFDCEGLRRLLGKYKFRDLTVEELRNVNVFFPHFKYSMDTYVFKDSSQKDLLNFTGTIP
::::::::::::::::::::::::::::::::::::::::::
NP_001 MEFDCEGLRRLLGKYKFRDLTVEELRNVNVFFPHFKYSMDTY------------------
10 20 30 40
70 80 90 100 110 120
pF1KE4 VMYQGNTYNIPIRFWILDSHPFAPPICFLKPTANMGILVGKHVDAQGRIYLPYLQNWSHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ----GNTYNIPIRFWILDSHPFAPPICFLKPTANMGILVGKHVDAQGRIYLPYLQNWSHP
50 60 70 80 90
130 140 150 160 170 180
pF1KE4 KSVIVGLIKEMIAKFQEELPMYSLSSSDEARQVDLLAYIAKITEGVSDTNSKSWANHENK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSVIVGLIKEMIAKFQEELPMYSLSSSDEARQVDLLAYIAKITEGVSDTNSKSWANHENK
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE4 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE4 SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMT
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE4 YVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLTWSGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLTWSGQ
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE4 EEVVSHTSQVQLSNRAMELLRVKGQRSWSVGLSVADMVDSIVNNKKKVHSVSALAKGYYD
:::::::::::::::
NP_001 EEVVSHTSQVQLSNRDIMI
340 350
>>XP_006718318 (OMIM: 610985) PREDICTED: ubiquitin-conju (248 aa)
initn: 1559 init1: 1559 opt: 1559 Z-score: 1912.2 bits: 362.2 E(85289): 9e-100
Smith-Waterman score: 1559; 100.0% identity (100.0% similar) in 248 aa overlap (224-471:1-248)
200 210 220 230 240 250
pF1KE4 GIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDLSASAHSKVVIFTV
::::::::::::::::::::::::::::::
XP_006 MDLEIFNLPNVEISKDLSASAHSKVVIFTV
10 20 30
260 270 280 290 300 310
pF1KE4 NSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMTYVTWKLSTFPANR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMTYVTWKLSTFPANR
40 50 60 70 80 90
320 330 340 350 360 370
pF1KE4 VIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLTWSGQEEVVSHTSQVQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLTWSGQEEVVSHTSQVQLS
100 110 120 130 140 150
380 390 400 410 420 430
pF1KE4 NRAMELLRVKGQRSWSVGLSVADMVDSIVNNKKKVHSVSALAKGYYDINSEVFLSLPCIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NRAMELLRVKGQRSWSVGLSVADMVDSIVNNKKKVHSVSALAKGYYDINSEVFLSLPCIL
160 170 180 190 200 210
440 450 460 470
pF1KE4 GTNGVSEVIKTTLKEDTVTEKLQSSASSIHSLQQQLKL
::::::::::::::::::::::::::::::::::::::
XP_006 GTNGVSEVIKTTLKEDTVTEKLQSSASSIHSLQQQLKL
220 230 240
>>XP_011518503 (OMIM: 610985) PREDICTED: ubiquitin-conju (248 aa)
initn: 1559 init1: 1559 opt: 1559 Z-score: 1912.2 bits: 362.2 E(85289): 9e-100
Smith-Waterman score: 1559; 100.0% identity (100.0% similar) in 248 aa overlap (224-471:1-248)
200 210 220 230 240 250
pF1KE4 GIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDLSASAHSKVVIFTV
::::::::::::::::::::::::::::::
XP_011 MDLEIFNLPNVEISKDLSASAHSKVVIFTV
10 20 30
260 270 280 290 300 310
pF1KE4 NSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMTYVTWKLSTFPANR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMTYVTWKLSTFPANR
40 50 60 70 80 90
320 330 340 350 360 370
pF1KE4 VIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLTWSGQEEVVSHTSQVQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLTWSGQEEVVSHTSQVQLS
100 110 120 130 140 150
380 390 400 410 420 430
pF1KE4 NRAMELLRVKGQRSWSVGLSVADMVDSIVNNKKKVHSVSALAKGYYDINSEVFLSLPCIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NRAMELLRVKGQRSWSVGLSVADMVDSIVNNKKKVHSVSALAKGYYDINSEVFLSLPCIL
160 170 180 190 200 210
440 450 460 470
pF1KE4 GTNGVSEVIKTTLKEDTVTEKLQSSASSIHSLQQQLKL
::::::::::::::::::::::::::::::::::::::
XP_011 GTNGVSEVIKTTLKEDTVTEKLQSSASSIHSLQQQLKL
220 230 240
>>XP_016873475 (OMIM: 610985) PREDICTED: ubiquitin-conju (249 aa)
initn: 1545 init1: 1545 opt: 1545 Z-score: 1895.1 bits: 359.1 E(85289): 8.1e-99
Smith-Waterman score: 1545; 100.0% identity (100.0% similar) in 245 aa overlap (131-375:1-245)
110 120 130 140 150 160
pF1KE4 KHVDAQGRIYLPYLQNWSHPKSVIVGLIKEMIAKFQEELPMYSLSSSDEARQVDLLAYIA
::::::::::::::::::::::::::::::
XP_016 MIAKFQEELPMYSLSSSDEARQVDLLAYIA
10 20 30
170 180 190 200 210 220
pF1KE4 KITEGVSDTNSKSWANHENKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KITEGVSDTNSKSWANHENKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTK
40 50 60 70 80 90
230 240 250 260 270 280
pF1KE4 GATMDLEIFNLPNVEISKDLSASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GATMDLEIFNLPNVEISKDLSASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPAL
100 110 120 130 140 150
290 300 310 320 330 340
pF1KE4 GHYSQHSVLLVASQPVEIMTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GHYSQHSVLLVASQPVEIMTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSG
160 170 180 190 200 210
350 360 370 380 390 400
pF1KE4 KEVWVIGEQGEDKVLTWSGQEEVVSHTSQVQLSNRAMELLRVKGQRSWSVGLSVADMVDS
:::::::::::::::::::::::::::::::::::
XP_016 KEVWVIGEQGEDKVLTWSGQEEVVSHTSQVQLSNRDIMI
220 230 240
410 420 430 440 450 460
pF1KE4 IVNNKKKVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSAS
471 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 18:12:42 2016 done: Mon Nov 7 18:12:43 2016
Total Scan time: 7.040 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]