Result of FASTA (omim) for
pFN21AE4094
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4094, 440 aa
1>>>pF1KE4094 440 - 440 aa - 440 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.8189+/-0.0004; mu= -7.3184+/- 0.025
mean_var=289.3314+/-60.251, 0's: 0 Z-trim(121.6): 156 B-trim: 1795 in 2/57
Lambda= 0.075401
statistics sampled from 38180 (38341) to 38180 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.767), E-opt: 0.2 (0.45), width: 16
Scan time: 9.640
The best scores are: opt bits E(85289)
NP_068759 (OMIM: 611372) stromal membrane-associat ( 440) 2963 335.5 1.7e-91
XP_011534349 (OMIM: 611372) PREDICTED: stromal mem ( 429) 2682 304.9 2.6e-82
NP_001268368 (OMIM: 611372) stromal membrane-assoc ( 436) 2682 304.9 2.6e-82
XP_011534350 (OMIM: 611372) PREDICTED: stromal mem ( 382) 2020 232.9 1.1e-60
XP_016866659 (OMIM: 611372) PREDICTED: stromal mem ( 382) 2020 232.9 1.1e-60
XP_011534348 (OMIM: 611372) PREDICTED: stromal mem ( 440) 2020 232.9 1.3e-60
NP_001268369 (OMIM: 611372) stromal membrane-assoc ( 457) 2020 232.9 1.3e-60
NP_001037770 (OMIM: 611372) stromal membrane-assoc ( 467) 2020 232.9 1.3e-60
XP_011534347 (OMIM: 611372) PREDICTED: stromal mem ( 456) 1739 202.4 2.1e-51
NP_073570 (OMIM: 616916) stromal membrane-associat ( 429) 1296 154.2 6.3e-37
NP_001185907 (OMIM: 616916) stromal membrane-assoc ( 399) 1187 142.3 2.2e-33
XP_011540262 (OMIM: 616916) PREDICTED: stromal mem ( 403) 1176 141.1 5.1e-33
NP_001185908 (OMIM: 616916) stromal membrane-assoc ( 424) 1173 140.8 6.7e-33
XP_005248817 (OMIM: 611372) PREDICTED: stromal mem ( 250) 972 118.8 1.7e-26
NP_001185909 (OMIM: 616916) stromal membrane-assoc ( 349) 848 105.4 2.5e-22
XP_016857582 (OMIM: 616916) PREDICTED: stromal mem ( 267) 595 77.8 3.9e-14
NP_036419 (OMIM: 607766) arf-GAP with coiled-coil, ( 778) 375 54.1 1.5e-06
XP_006713620 (OMIM: 607766) PREDICTED: arf-GAP wit ( 785) 375 54.1 1.5e-06
XP_016861538 (OMIM: 607766) PREDICTED: arf-GAP wit ( 806) 375 54.1 1.5e-06
XP_016861537 (OMIM: 607766) PREDICTED: arf-GAP wit ( 813) 375 54.1 1.5e-06
XP_011510908 (OMIM: 607766) PREDICTED: arf-GAP wit ( 776) 365 53.0 3.2e-06
XP_011510907 (OMIM: 607766) PREDICTED: arf-GAP wit ( 776) 365 53.0 3.2e-06
XP_011510906 (OMIM: 607766) PREDICTED: arf-GAP wit ( 776) 365 53.0 3.2e-06
XP_011510905 (OMIM: 607766) PREDICTED: arf-GAP wit ( 813) 365 53.0 3.3e-06
XP_011510904 (OMIM: 607766) PREDICTED: arf-GAP wit ( 820) 365 53.1 3.3e-06
XP_016861536 (OMIM: 607766) PREDICTED: arf-GAP wit ( 841) 365 53.1 3.4e-06
XP_016861535 (OMIM: 607766) PREDICTED: arf-GAP wit ( 848) 365 53.1 3.4e-06
XP_016867224 (OMIM: 616813) PREDICTED: arf-GAP wit ( 462) 335 49.6 2e-05
XP_016867222 (OMIM: 616813) PREDICTED: arf-GAP wit ( 527) 335 49.7 2.2e-05
XP_005250000 (OMIM: 616813) PREDICTED: arf-GAP wit ( 565) 335 49.7 2.3e-05
NP_001268229 (OMIM: 616813) arf-GAP with GTPase, A ( 580) 335 49.7 2.4e-05
XP_016867223 (OMIM: 616813) PREDICTED: arf-GAP wit ( 580) 335 49.7 2.4e-05
NP_055729 (OMIM: 608651) arf-GAP with GTPase, ANK ( 804) 338 50.1 2.5e-05
XP_005246116 (OMIM: 608651) PREDICTED: arf-GAP wit ( 808) 338 50.1 2.5e-05
XP_016867221 (OMIM: 616813) PREDICTED: arf-GAP wit ( 630) 335 49.7 2.6e-05
NP_001032208 (OMIM: 608651) arf-GAP with GTPase, A ( 857) 338 50.1 2.6e-05
XP_006712298 (OMIM: 608651) PREDICTED: arf-GAP wit ( 882) 338 50.1 2.7e-05
XP_006712297 (OMIM: 608651) PREDICTED: arf-GAP wit ( 886) 338 50.1 2.7e-05
XP_011514082 (OMIM: 616813) PREDICTED: arf-GAP wit ( 683) 335 49.7 2.7e-05
XP_011508851 (OMIM: 608651) PREDICTED: arf-GAP wit (1073) 338 50.2 3.1e-05
XP_011508850 (OMIM: 608651) PREDICTED: arf-GAP wit (1098) 338 50.2 3.2e-05
XP_016858771 (OMIM: 608651) PREDICTED: arf-GAP wit (1106) 338 50.2 3.2e-05
XP_011508849 (OMIM: 608651) PREDICTED: arf-GAP wit (1126) 338 50.2 3.3e-05
NP_006860 (OMIM: 608114) arf-GAP with dual PH doma ( 374) 326 48.6 3.3e-05
XP_006712300 (OMIM: 608651) PREDICTED: arf-GAP wit (1147) 338 50.2 3.3e-05
XP_006712302 (OMIM: 608651) PREDICTED: arf-GAP wit (1151) 338 50.2 3.3e-05
NP_114152 (OMIM: 616813) arf-GAP with GTPase, ANK ( 911) 335 49.8 3.4e-05
NP_060874 (OMIM: 608635) arf-GAP with dual PH doma ( 381) 325 48.5 3.6e-05
NP_055531 (OMIM: 607763) arf-GAP with coiled-coil, ( 740) 313 47.4 0.00015
NP_115765 (OMIM: 606908) ADP-ribosylation factor G ( 521) 305 46.4 0.00021
>>NP_068759 (OMIM: 611372) stromal membrane-associated p (440 aa)
initn: 2963 init1: 2963 opt: 2963 Z-score: 1763.8 bits: 335.5 E(85289): 1.7e-91
Smith-Waterman score: 2963; 100.0% identity (100.0% similar) in 440 aa overlap (1-440:1-440)
10 20 30 40 50 60
pF1KE4 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DKYEKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQLEPKKSTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 DKYEKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQLEPKKSTS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 PKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQGTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 PKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQGTPS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 APAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVFMGPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 APAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVFMGPT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 NIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVMGQSPSMMVGMPMPNGFMGNAQTGVMPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 NIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVMGQSPSMMVGMPMPNGFMGNAQTGVMPL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 PQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMAGMSISSATPTAGFGQPSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 PQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMAGMSISSATPTAGFGQPSS
370 380 390 400 410 420
430 440
pF1KE4 TTAGWSGSSSGQTLSTQLWK
::::::::::::::::::::
NP_068 TTAGWSGSSSGQTLSTQLWK
430 440
>>XP_011534349 (OMIM: 611372) PREDICTED: stromal membran (429 aa)
initn: 2763 init1: 2682 opt: 2682 Z-score: 1598.7 bits: 304.9 E(85289): 2.6e-82
Smith-Waterman score: 2682; 99.2% identity (99.8% similar) in 400 aa overlap (1-400:1-400)
10 20 30 40 50 60
pF1KE4 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DKYEKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQLEPKKSTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DKYEKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQLEPKKSTS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 PKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQGTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQGTPS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 APAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVFMGPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVFMGPT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 NIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVMGQSPSMMVGMPMPNGFMGNAQTGVMPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVMGQSPSMMVGMPMPNGFMGNAQTGVMPL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 PQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMAGMSISSATPTAGFGQPSS
::::::::::::::::::::::::::::::::::::. :.
XP_011 PQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWSLSQIMQKGDAVLQHSISAIYWPMTRWL
370 380 390 400 410 420
430 440
pF1KE4 TTAGWSGSSSGQTLSTQLWK
XP_011 KCPLVGMKT
>>NP_001268368 (OMIM: 611372) stromal membrane-associate (436 aa)
initn: 2763 init1: 2682 opt: 2682 Z-score: 1598.6 bits: 304.9 E(85289): 2.6e-82
Smith-Waterman score: 2682; 99.2% identity (99.8% similar) in 400 aa overlap (1-400:1-400)
10 20 30 40 50 60
pF1KE4 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DKYEKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQLEPKKSTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKYEKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQLEPKKSTS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 PKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQGTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQGTPS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 APAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVFMGPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVFMGPT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 NIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVMGQSPSMMVGMPMPNGFMGNAQTGVMPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVMGQSPSMMVGMPMPNGFMGNAQTGVMPL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 PQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMAGMSISSATPTAGFGQPSS
::::::::::::::::::::::::::::::::::::. :.
NP_001 PQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWSLSQIMQKGDAVLQHSISAIYWPMTRWL
370 380 390 400 410 420
430 440
pF1KE4 TTAGWSGSSSGQTLSTQLWK
NP_001 KCPLVDESADGWHEYQ
430
>>XP_011534350 (OMIM: 611372) PREDICTED: stromal membran (382 aa)
initn: 2349 init1: 2014 opt: 2020 Z-score: 1210.3 bits: 232.9 E(85289): 1.1e-60
Smith-Waterman score: 2299; 92.9% identity (92.9% similar) in 382 aa overlap (86-440:1-382)
60 70 80 90 100 110
pF1KE4 CAGIHRNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAV
::::::::::::::::::::::::::::::
XP_011 MQDMGNTKARLLYEANLPENFRRPQTDQAV
10 20 30
120 130 140
pF1KE4 EFFIRDKYEKKKYYDKNAIAITN---------------------------KEKEKKKEEK
::::::::::::::::::::::: ::::::::::
XP_011 EFFIRDKYEKKKYYDKNAIAITNISSSDAPLQPLVSSPSLQAAVDKNKLEKEKEKKKEEK
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE4 KREKEPEKPAKPLTAEKLQKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KREKEPEKPAKPLTAEKLQKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTT
100 110 120 130 140 150
210 220 230 240 250 260
pF1KE4 VPPLNDDLDIFGPMISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPPLNDDLDIFGPMISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEV
160 170 180 190 200 210
270 280 290 300 310 320
pF1KE4 AKKQLSKDSILSLYGTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAAPGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AKKQLSKDSILSLYGTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAAPGL
220 230 240 250 260 270
330 340 350 360 370 380
pF1KE4 IGNVMGQSPSMMVGMPMPNGFMGNAQTGVMPLPQNVVGPQGGMVGQMGAPQSKFGLPQAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IGNVMGQSPSMMVGMPMPNGFMGNAQTGVMPLPQNVVGPQGGMVGQMGAPQSKFGLPQAQ
280 290 300 310 320 330
390 400 410 420 430 440
pF1KE4 QPQWSLSQMNQQMAGMSISSATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QPQWSLSQMNQQMAGMSISSATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
340 350 360 370 380
>>XP_016866659 (OMIM: 611372) PREDICTED: stromal membran (382 aa)
initn: 2349 init1: 2014 opt: 2020 Z-score: 1210.3 bits: 232.9 E(85289): 1.1e-60
Smith-Waterman score: 2299; 92.9% identity (92.9% similar) in 382 aa overlap (86-440:1-382)
60 70 80 90 100 110
pF1KE4 CAGIHRNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAV
::::::::::::::::::::::::::::::
XP_016 MQDMGNTKARLLYEANLPENFRRPQTDQAV
10 20 30
120 130 140
pF1KE4 EFFIRDKYEKKKYYDKNAIAITN---------------------------KEKEKKKEEK
::::::::::::::::::::::: ::::::::::
XP_016 EFFIRDKYEKKKYYDKNAIAITNISSSDAPLQPLVSSPSLQAAVDKNKLEKEKEKKKEEK
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE4 KREKEPEKPAKPLTAEKLQKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KREKEPEKPAKPLTAEKLQKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTT
100 110 120 130 140 150
210 220 230 240 250 260
pF1KE4 VPPLNDDLDIFGPMISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPPLNDDLDIFGPMISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEV
160 170 180 190 200 210
270 280 290 300 310 320
pF1KE4 AKKQLSKDSILSLYGTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAAPGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKKQLSKDSILSLYGTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAAPGL
220 230 240 250 260 270
330 340 350 360 370 380
pF1KE4 IGNVMGQSPSMMVGMPMPNGFMGNAQTGVMPLPQNVVGPQGGMVGQMGAPQSKFGLPQAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IGNVMGQSPSMMVGMPMPNGFMGNAQTGVMPLPQNVVGPQGGMVGQMGAPQSKFGLPQAQ
280 290 300 310 320 330
390 400 410 420 430 440
pF1KE4 QPQWSLSQMNQQMAGMSISSATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QPQWSLSQMNQQMAGMSISSATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
340 350 360 370 380
>>XP_011534348 (OMIM: 611372) PREDICTED: stromal membran (440 aa)
initn: 2690 init1: 2014 opt: 2020 Z-score: 1209.4 bits: 232.9 E(85289): 1.3e-60
Smith-Waterman score: 2640; 93.0% identity (93.5% similar) in 431 aa overlap (37-440:10-440)
10 20 30 40 50 60
pF1KE4 REKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVH
.. :::::::::::::::::::::::::::
XP_011 MFSQGPRALQSAGPRWASWNIGVFICIRCAGIHRNLGVH
10 20 30
70 80 90 100 110 120
pF1KE4 ISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIRDKYEKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIRDKYEKK
40 50 60 70 80 90
130 140 150
pF1KE4 KYYDKNAIAITN---------------------------KEKEKKKEEKKREKEPEKPAK
:::::::::::: :::::::::::::::::::::
XP_011 KYYDKNAIAITNISSSDAPLQPLVSSPSLQAAVDKNKLEKEKEKKKEEKKREKEPEKPAK
100 110 120 130 140 150
160 170 180 190 200 210
pF1KE4 PLTAEKLQKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLTAEKLQKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIF
160 170 180 190 200 210
220 230 240 250 260 270
pF1KE4 GPMISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPMISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSIL
220 230 240 250 260 270
280 290 300 310 320 330
pF1KE4 SLYGTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVMGQSPSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLYGTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVMGQSPSM
280 290 300 310 320 330
340 350 360 370 380 390
pF1KE4 MVGMPMPNGFMGNAQTGVMPLPQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVGMPMPNGFMGNAQTGVMPLPQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQ
340 350 360 370 380 390
400 410 420 430 440
pF1KE4 QMAGMSISSATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
:::::::::::::::::::::::::::::::::::::::::
XP_011 QMAGMSISSATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
400 410 420 430 440
>>NP_001268369 (OMIM: 611372) stromal membrane-associate (457 aa)
initn: 2688 init1: 2014 opt: 2020 Z-score: 1209.1 bits: 232.9 E(85289): 1.3e-60
Smith-Waterman score: 2638; 93.7% identity (93.7% similar) in 428 aa overlap (40-440:30-457)
10 20 30 40 50 60
pF1KE4 AQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISR
::::::::::::::::::::::::::::::
NP_001 MEPYLPAHLTAFVQGFYLCFLKKSMVVFFGPRWASWNIGVFICIRCAGIHRNLGVHISR
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 VKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIRDKYEKKKYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIRDKYEKKKYY
60 70 80 90 100 110
130 140 150 160
pF1KE4 DKNAIAITN---------------------------KEKEKKKEEKKREKEPEKPAKPLT
::::::::: ::::::::::::::::::::::::
NP_001 DKNAIAITNISSSDAPLQPLVSSPSLQAAVDKNKLEKEKEKKKEEKKREKEPEKPAKPLT
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE4 AEKLQKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEKLQKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPM
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE4 ISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLY
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE4 GTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVMGQSPSMMVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVMGQSPSMMVG
300 310 320 330 340 350
350 360 370 380 390 400
pF1KE4 MPMPNGFMGNAQTGVMPLPQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPMPNGFMGNAQTGVMPLPQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMA
360 370 380 390 400 410
410 420 430 440
pF1KE4 GMSISSATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
::::::::::::::::::::::::::::::::::::::
NP_001 GMSISSATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
420 430 440 450
>>NP_001037770 (OMIM: 611372) stromal membrane-associate (467 aa)
initn: 2949 init1: 2014 opt: 2020 Z-score: 1209.0 bits: 232.9 E(85289): 1.3e-60
Smith-Waterman score: 2899; 94.2% identity (94.2% similar) in 467 aa overlap (1-440:1-467)
10 20 30 40 50 60
pF1KE4 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
70 80 90 100 110 120
130 140 150
pF1KE4 DKYEKKKYYDKNAIAITN---------------------------KEKEKKKEEKKREKE
:::::::::::::::::: :::::::::::::::
NP_001 DKYEKKKYYDKNAIAITNISSSDAPLQPLVSSPSLQAAVDKNKLEKEKEKKKEEKKREKE
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE4 PEKPAKPLTAEKLQKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEKPAKPLTAEKLQKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLN
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE4 DDLDIFGPMISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDLDIFGPMISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQL
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE4 SKDSILSLYGTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKDSILSLYGTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVM
310 320 330 340 350 360
340 350 360 370 380 390
pF1KE4 GQSPSMMVGMPMPNGFMGNAQTGVMPLPQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GQSPSMMVGMPMPNGFMGNAQTGVMPLPQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWS
370 380 390 400 410 420
400 410 420 430 440
pF1KE4 LSQMNQQMAGMSISSATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSQMNQQMAGMSISSATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
430 440 450 460
>>XP_011534347 (OMIM: 611372) PREDICTED: stromal membran (456 aa)
initn: 2749 init1: 1733 opt: 1739 Z-score: 1043.9 bits: 202.4 E(85289): 2.1e-51
Smith-Waterman score: 2618; 93.0% identity (93.4% similar) in 427 aa overlap (1-400:1-427)
10 20 30 40 50 60
pF1KE4 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
70 80 90 100 110 120
130 140 150
pF1KE4 DKYEKKKYYDKNAIAITN---------------------------KEKEKKKEEKKREKE
:::::::::::::::::: :::::::::::::::
XP_011 DKYEKKKYYDKNAIAITNISSSDAPLQPLVSSPSLQAAVDKNKLEKEKEKKKEEKKREKE
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE4 PEKPAKPLTAEKLQKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEKPAKPLTAEKLQKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLN
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE4 DDLDIFGPMISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DDLDIFGPMISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQL
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE4 SKDSILSLYGTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SKDSILSLYGTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVM
310 320 330 340 350 360
340 350 360 370 380 390
pF1KE4 GQSPSMMVGMPMPNGFMGNAQTGVMPLPQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQSPSMMVGMPMPNGFMGNAQTGVMPLPQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWS
370 380 390 400 410 420
400 410 420 430 440
pF1KE4 LSQMNQQMAGMSISSATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
:::. :.
XP_011 LSQIMQKGDAVLQHSISAIYWPMTRWLKCPLVGMKT
430 440 450
>>NP_073570 (OMIM: 616916) stromal membrane-associated p (429 aa)
initn: 1091 init1: 734 opt: 1296 Z-score: 783.9 bits: 154.2 E(85289): 6.3e-37
Smith-Waterman score: 1297; 50.1% identity (73.3% similar) in 445 aa overlap (9-440:4-429)
10 20 30 40 50 60
pF1KE4 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
:. : ...: .:..:: :::::.::::..::::::::::::::::::::::
NP_073 MTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIH
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
::::::::::::::::::: :::::::.::: :: :::: :::.::::: : ::: :::
NP_073 RNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIR
60 70 80 90 100 110
130 140 150 160 170
pF1KE4 DKYEKKKYYDKNAIAITNKEKEKKKEEKK-REKEPEKPAKPLTAEKL---QKKDQQLEPK
::::::::.:.. . :. .::: . :. : ::: .:.. ::. :::.. :.
NP_073 DKYEKKKYMDRS-LDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE4 KSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQ
:: :::..: :..::::::.:.. ..:..:. :. :::. . : : :.. .
NP_073 KS-SPKSTA-PVMDLLGLDAPVACSIANSKTS-NTLEKDLDL---LASVPSPSSS-GSRK
180 190 200 210 220
240 250 260 270 280 290
pF1KE4 GTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVF
. : :.:.. ..: .:.:: : .::::..::::::::::::::. : :. : ..:
NP_073 VVGSMPTAGSAGSVPE-NLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQT-PQMPTQAMF
230 240 250 260 270 280
300 310 320 330 340
pF1KE4 MGPTNIPFTSQAPAAFQGFPSMGVPVPAA------PGLIGNVMGQSPSMMVG-MPMPNGF
:.:... . :.:. .:: :: : . : .: : . : ::. : :: :.
NP_073 MAPAQMAY----PTAYPSFP--GVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGY
290 300 310 320 330
350 360 370 380 390 400
pF1KE4 MGNAQTGVMPLPQNVVGPQ--GGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMAGMSIS
::. :...: .:.... : : :.:. . ::. .:. ::: ::.:.::.::::::..
NP_073 MGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFY
340 350 360 370 380 390
410 420 430 440
pF1KE4 SATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
.:. ..:: : : .:....:::: :.::
NP_073 GANGMMNYGQSMS---GGNGQAANQTLSPQMWK
400 410 420
440 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 05:50:41 2016 done: Thu Nov 3 05:50:42 2016
Total Scan time: 9.640 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]