Result of FASTA (ccds) for
pFN21AE4094
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4094, 440 aa
1>>>pF1KE4094 440 - 440 aa - 440 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.1422+/-0.00094; mu= -3.2522+/- 0.056
mean_var=246.6898+/-50.707, 0's: 0 Z-trim(113.6): 64 B-trim: 218 in 2/51
Lambda= 0.081658
statistics sampled from 14142 (14204) to 14142 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.768), E-opt: 0.2 (0.436), width: 16
Scan time: 3.600
The best scores are: opt bits E(32554)
CCDS4973.1 SMAP1 gene_id:60682|Hs108|chr6 ( 440) 2963 361.8 7.9e-100
CCDS64459.1 SMAP1 gene_id:60682|Hs108|chr6 ( 436) 2682 328.7 7.2e-90
CCDS75478.1 SMAP1 gene_id:60682|Hs108|chr6 ( 457) 2020 250.7 2.3e-66
CCDS43478.1 SMAP1 gene_id:60682|Hs108|chr6 ( 467) 2020 250.7 2.3e-66
CCDS451.1 SMAP2 gene_id:64744|Hs108|chr1 ( 429) 1296 165.4 1e-40
CCDS55592.1 SMAP2 gene_id:64744|Hs108|chr1 ( 399) 1187 152.5 7e-37
CCDS72763.1 SMAP2 gene_id:64744|Hs108|chr1 ( 424) 1173 150.9 2.3e-36
CCDS55593.1 SMAP2 gene_id:64744|Hs108|chr1 ( 349) 848 112.5 6.6e-25
>>CCDS4973.1 SMAP1 gene_id:60682|Hs108|chr6 (440 aa)
initn: 2963 init1: 2963 opt: 2963 Z-score: 1905.7 bits: 361.8 E(32554): 7.9e-100
Smith-Waterman score: 2963; 100.0% identity (100.0% similar) in 440 aa overlap (1-440:1-440)
10 20 30 40 50 60
pF1KE4 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DKYEKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQLEPKKSTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 DKYEKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQLEPKKSTS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 PKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQGTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 PKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQGTPS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 APAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVFMGPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 APAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVFMGPT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 NIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVMGQSPSMMVGMPMPNGFMGNAQTGVMPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 NIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVMGQSPSMMVGMPMPNGFMGNAQTGVMPL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 PQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMAGMSISSATPTAGFGQPSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 PQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMAGMSISSATPTAGFGQPSS
370 380 390 400 410 420
430 440
pF1KE4 TTAGWSGSSSGQTLSTQLWK
::::::::::::::::::::
CCDS49 TTAGWSGSSSGQTLSTQLWK
430 440
>>CCDS64459.1 SMAP1 gene_id:60682|Hs108|chr6 (436 aa)
initn: 2763 init1: 2682 opt: 2682 Z-score: 1726.9 bits: 328.7 E(32554): 7.2e-90
Smith-Waterman score: 2682; 99.2% identity (99.8% similar) in 400 aa overlap (1-400:1-400)
10 20 30 40 50 60
pF1KE4 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DKYEKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQLEPKKSTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 DKYEKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQLEPKKSTS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 PKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQGTPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 PKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQGTPS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 APAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVFMGPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 APAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVFMGPT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE4 NIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVMGQSPSMMVGMPMPNGFMGNAQTGVMPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 NIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVMGQSPSMMVGMPMPNGFMGNAQTGVMPL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE4 PQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMAGMSISSATPTAGFGQPSS
::::::::::::::::::::::::::::::::::::. :.
CCDS64 PQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWSLSQIMQKGDAVLQHSISAIYWPMTRWL
370 380 390 400 410 420
430 440
pF1KE4 TTAGWSGSSSGQTLSTQLWK
CCDS64 KCPLVDESADGWHEYQ
430
>>CCDS75478.1 SMAP1 gene_id:60682|Hs108|chr6 (457 aa)
initn: 2688 init1: 2014 opt: 2020 Z-score: 1305.1 bits: 250.7 E(32554): 2.3e-66
Smith-Waterman score: 2638; 93.7% identity (93.7% similar) in 428 aa overlap (40-440:30-457)
10 20 30 40 50 60
pF1KE4 AQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISR
::::::::::::::::::::::::::::::
CCDS75 MEPYLPAHLTAFVQGFYLCFLKKSMVVFFGPRWASWNIGVFICIRCAGIHRNLGVHISR
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 VKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIRDKYEKKKYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIRDKYEKKKYY
60 70 80 90 100 110
130 140 150 160
pF1KE4 DKNAIAITN---------------------------KEKEKKKEEKKREKEPEKPAKPLT
::::::::: ::::::::::::::::::::::::
CCDS75 DKNAIAITNISSSDAPLQPLVSSPSLQAAVDKNKLEKEKEKKKEEKKREKEPEKPAKPLT
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE4 AEKLQKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 AEKLQKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPM
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE4 ISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 ISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLY
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE4 GTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVMGQSPSMMVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 GTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVMGQSPSMMVG
300 310 320 330 340 350
350 360 370 380 390 400
pF1KE4 MPMPNGFMGNAQTGVMPLPQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MPMPNGFMGNAQTGVMPLPQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMA
360 370 380 390 400 410
410 420 430 440
pF1KE4 GMSISSATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
::::::::::::::::::::::::::::::::::::::
CCDS75 GMSISSATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
420 430 440 450
>>CCDS43478.1 SMAP1 gene_id:60682|Hs108|chr6 (467 aa)
initn: 2949 init1: 2014 opt: 2020 Z-score: 1305.0 bits: 250.7 E(32554): 2.3e-66
Smith-Waterman score: 2899; 94.2% identity (94.2% similar) in 467 aa overlap (1-440:1-467)
10 20 30 40 50 60
pF1KE4 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
70 80 90 100 110 120
130 140 150
pF1KE4 DKYEKKKYYDKNAIAITN---------------------------KEKEKKKEEKKREKE
:::::::::::::::::: :::::::::::::::
CCDS43 DKYEKKKYYDKNAIAITNISSSDAPLQPLVSSPSLQAAVDKNKLEKEKEKKKEEKKREKE
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE4 PEKPAKPLTAEKLQKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PEKPAKPLTAEKLQKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLN
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE4 DDLDIFGPMISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DDLDIFGPMISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQL
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE4 SKDSILSLYGTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SKDSILSLYGTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAAPGLIGNVM
310 320 330 340 350 360
340 350 360 370 380 390
pF1KE4 GQSPSMMVGMPMPNGFMGNAQTGVMPLPQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GQSPSMMVGMPMPNGFMGNAQTGVMPLPQNVVGPQGGMVGQMGAPQSKFGLPQAQQPQWS
370 380 390 400 410 420
400 410 420 430 440
pF1KE4 LSQMNQQMAGMSISSATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LSQMNQQMAGMSISSATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
430 440 450 460
>>CCDS451.1 SMAP2 gene_id:64744|Hs108|chr1 (429 aa)
initn: 1091 init1: 734 opt: 1296 Z-score: 844.5 bits: 165.4 E(32554): 1e-40
Smith-Waterman score: 1297; 50.1% identity (73.3% similar) in 445 aa overlap (9-440:4-429)
10 20 30 40 50 60
pF1KE4 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
:. : ...: .:..:: :::::.::::..::::::::::::::::::::::
CCDS45 MTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIH
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
::::::::::::::::::: :::::::.::: :: :::: :::.::::: : ::: :::
CCDS45 RNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIR
60 70 80 90 100 110
130 140 150 160 170
pF1KE4 DKYEKKKYYDKNAIAITNKEKEKKKEEKK-REKEPEKPAKPLTAEKL---QKKDQQLEPK
::::::::.:.. . :. .::: . :. : ::: .:.. ::. :::.. :.
CCDS45 DKYEKKKYMDRS-LDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE4 KSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQ
:: :::..: :..::::::.:.. ..:..:. :. :::. . : : :.. .
CCDS45 KS-SPKSTA-PVMDLLGLDAPVACSIANSKTS-NTLEKDLDL---LASVPSPSSS-GSRK
180 190 200 210 220
240 250 260 270 280 290
pF1KE4 GTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVF
. : :.:.. ..: .:.:: : .::::..::::::::::::::. : :. : ..:
CCDS45 VVGSMPTAGSAGSVPE-NLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQT-PQMPTQAMF
230 240 250 260 270 280
300 310 320 330 340
pF1KE4 MGPTNIPFTSQAPAAFQGFPSMGVPVPAA------PGLIGNVMGQSPSMMVG-MPMPNGF
:.:... . :.:. .:: :: : . : .: : . : ::. : :: :.
CCDS45 MAPAQMAY----PTAYPSFP--GVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGY
290 300 310 320 330
350 360 370 380 390 400
pF1KE4 MGNAQTGVMPLPQNVVGPQ--GGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMAGMSIS
::. :...: .:.... : : :.:. . ::. .:. ::: ::.:.::.::::::..
CCDS45 MGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFY
340 350 360 370 380 390
410 420 430 440
pF1KE4 SATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
.:. ..:: : : .:....:::: :.::
CCDS45 GANGMMNYGQSMS---GGNGQAANQTLSPQMWK
400 410 420
>>CCDS55592.1 SMAP2 gene_id:64744|Hs108|chr1 (399 aa)
initn: 985 init1: 628 opt: 1187 Z-score: 775.6 bits: 152.5 E(32554): 7e-37
Smith-Waterman score: 1188; 50.1% identity (72.5% similar) in 415 aa overlap (39-440:4-399)
10 20 30 40 50 60
pF1KE4 KAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHIS
::::::::::::::::::::::::::::::
CCDS55 MIFKGPRWASWNIGVFICIRCAGIHRNLGVHIS
10 20 30
70 80 90 100 110 120
pF1KE4 RVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIRDKYEKKKY
::::::::::: :::::::.::: :: :::: :::.::::: : ::: :::::::::::
CCDS55 RVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKY
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE4 YDKNAIAITNKEKEKKKEEKK-REKEPEKPAKPLTAEKL---QKKDQQLEPKKSTSPKKA
.:.. . :. .::: . :. : ::: .:.. ::. :::.. :.:: :::..
CCDS55 MDRS-LDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKS-SPKST
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE4 AEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQGTPSAPAA
: :..::::::.:.. ..:..:. :. :::. . : : :.. . . : :.:
CCDS55 A-PVMDLLGLDAPVACSIANSKTS-NTLEKDLDL---LASVPSPSSS-GSRKVVGSMPTA
160 170 180 190 200
250 260 270 280 290 300
pF1KE4 ATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVFMGPTNIPF
.. ..: .:.:: : .::::..::::::::::::::. : :. : ..::.:... .
CCDS55 GSAGSVPE-NLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQT-PQMPTQAMFMAPAQMAY
210 220 230 240 250 260
310 320 330 340 350
pF1KE4 TSQAPAAFQGFPSMGVPVPAA------PGLIGNVMGQSPSMMVG-MPMPNGFMGNAQTGV
:.:. .:: :: : . : .: : . : ::. : :: :.::. :...
CCDS55 ----PTAYPSFP--GVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASM
270 280 290 300 310
360 370 380 390 400 410
pF1KE4 MPLPQNVVGPQ--GGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMAGMSISSATPTAGF
: .:.... : : :.:. . ::. .:. ::: ::.:.::.::::::.. .:. ..
CCDS55 MGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNY
320 330 340 350 360 370
420 430 440
pF1KE4 GQPSSTTAGWSGSSSGQTLSTQLWK
:: : : .:....:::: :.::
CCDS55 GQSMS---GGNGQAANQTLSPQMWK
380 390
>>CCDS72763.1 SMAP2 gene_id:64744|Hs108|chr1 (424 aa)
initn: 971 init1: 614 opt: 1173 Z-score: 766.3 bits: 150.9 E(32554): 2.3e-36
Smith-Waterman score: 1174; 49.6% identity (72.6% similar) in 413 aa overlap (41-440:31-424)
20 30 40 50 60 70
pF1KE4 QKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRV
::::::::::::::::::::::::::::::
CCDS72 MGKVGRARFAQKDVLQIEEIGPVKLFVRDWPRWASWNIGVFICIRCAGIHRNLGVHISRV
10 20 30 40 50 60
80 90 100 110 120 130
pF1KE4 KSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIRDKYEKKKYYD
::::::::: :::::::.::: :: :::: :::.::::: : ::: :::::::::::.:
CCDS72 KSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKYMD
70 80 90 100 110 120
140 150 160 170 180
pF1KE4 KNAIAITNKEKEKKKEEKK-REKEPEKPAKPLTAEKL---QKKDQQLEPKKSTSPKKAAE
.. . :. .::: . :. : ::: .:.. ::. :::.. :.:: :::..:
CCDS72 RS-LDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKS-SPKSTA-
130 140 150 160 170
190 200 210 220 230 240
pF1KE4 PTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQGTPSAPAAAT
:..::::::.:.. ..:..:. :. :::. . : : :.. . . : :.:..
CCDS72 PVMDLLGLDAPVACSIANSKTS-NTLEKDLDL---LASVPSPSSS-GSRKVVGSMPTAGS
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE4 LSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVFMGPTNIPFTS
..: .:.:: : .::::..::::::::::::::. : :. : ..::.:... .
CCDS72 AGSVPE-NLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQT-PQMPTQAMFMAPAQMAY--
240 250 260 270 280
310 320 330 340 350
pF1KE4 QAPAAFQGFPSMGVPVPAA------PGLIGNVMGQSPSMMVG-MPMPNGFMGNAQTGVMP
:.:. .:: :: : . : .: : . : ::. : :: :.::. :...:
CCDS72 --PTAYPSFP--GVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMG
290 300 310 320 330 340
360 370 380 390 400 410
pF1KE4 LPQNVVGPQ--GGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMAGMSISSATPTAGFGQ
.:.... : : :.:. . ::. .:. ::: ::.:.::.::::::.. .:. ..::
CCDS72 VPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQ
350 360 370 380 390 400
420 430 440
pF1KE4 PSSTTAGWSGSSSGQTLSTQLWK
. .: .:....:::: :.::
CCDS72 ---SMSGGNGQAANQTLSPQMWK
410 420
>>CCDS55593.1 SMAP2 gene_id:64744|Hs108|chr1 (349 aa)
initn: 646 init1: 289 opt: 848 Z-score: 560.6 bits: 112.5 E(32554): 6.6e-25
Smith-Waterman score: 849; 43.8% identity (69.6% similar) in 368 aa overlap (86-440:1-349)
60 70 80 90 100 110
pF1KE4 CAGIHRNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAV
::.::: :: :::: :::.::::: : ::
CCDS55 MQEMGNGKANRLYEAYLPETFRRPQIDPAV
10 20 30
120 130 140 150 160 170
pF1KE4 EFFIRDKYEKKKYYDKNAIAITNKEKEKKKEEKK-REKEPEKPAKPLTAEKL---QKKDQ
: :::::::::::.:.. . :. .::: . :. : ::: .:.. ::. :::..
CCDS55 EGFIRDKYEKKKYMDRS-LDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKED
40 50 60 70 80
180 190 200 210 220 230
pF1KE4 QLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATV
:.:: :::..: :..::::::.:.. ..:..:. :. :::. . : : :..
CCDS55 PQLPRKS-SPKSTA-PVMDLLGLDAPVACSIANSKTS-NTLEKDLDL---LASVPSPSSS
90 100 110 120 130 140
240 250 260 270 280 290
pF1KE4 MPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQS
. . : :.:.. ..: .:.:: : .::::..::::::::::::::. : :.
CCDS55 -GSRKVVGSMPTAGSAGSVPE-NLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQT-PQMP
150 160 170 180 190 200
300 310 320 330 340
pF1KE4 TPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAA------PGLIGNVMGQSPSMMVG-MP
: ..::.:... . :.:. .:: :: : . : .: : . : ::. :
CCDS55 TQAMFMAPAQMAY----PTAYPSFP--GVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMA
210 220 230 240 250
350 360 370 380 390 400
pF1KE4 MPNGFMGNAQTGVMPLPQNVVGPQ--GGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMA
:: :.::. :...: .:.... : : :.:. . ::. .:. ::: ::.:.::.::::
CCDS55 MPAGYMGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMA
260 270 280 290 300 310
410 420 430 440
pF1KE4 GMSISSATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
::.. .:. ..:: . .: .:....:::: :.::
CCDS55 GMNFYGANGMMNYGQ---SMSGGNGQAANQTLSPQMWK
320 330 340
440 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 05:50:40 2016 done: Thu Nov 3 05:50:40 2016
Total Scan time: 3.600 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]