Result of FASTA (ccds) for
pFN21AE4064
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4064, 344 aa
1>>>pF1KE4064 344 - 344 aa - 344 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0593+/-0.000763; mu= 17.9722+/- 0.046
mean_var=65.5556+/-12.803, 0's: 0 Z-trim(108.6): 79 B-trim: 0 in 0/52
Lambda= 0.158405
statistics sampled from 10255 (10335) to 10255 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.317), width: 16
Scan time: 2.630
The best scores are: opt bits E(32554)
CCDS66591.1 GRTP1 gene_id:79774|Hs108|chr13 ( 344) 2373 550.8 6.1e-157
CCDS9534.2 GRTP1 gene_id:79774|Hs108|chr13 ( 336) 2086 485.2 3.3e-137
CCDS73606.1 GRTP1 gene_id:79774|Hs108|chr13 ( 236) 1286 302.3 2.7e-82
CCDS59137.1 TBC1D2 gene_id:55357|Hs108|chr9 ( 468) 537 131.3 1.6e-30
CCDS75865.1 TBC1D2 gene_id:55357|Hs108|chr9 ( 928) 537 131.5 2.7e-30
CCDS47136.1 TBC1D9 gene_id:23158|Hs108|chr4 (1266) 531 130.2 9e-30
CCDS4450.1 TBC1D9B gene_id:23061|Hs108|chr5 (1233) 521 127.9 4.3e-29
CCDS43408.1 TBC1D9B gene_id:23061|Hs108|chr5 (1250) 521 127.9 4.4e-29
CCDS46375.1 TBC1D8 gene_id:11138|Hs108|chr2 (1140) 509 125.1 2.7e-28
CCDS82486.1 TBC1D8 gene_id:11138|Hs108|chr2 (1155) 509 125.1 2.7e-28
CCDS10676.2 TBC1D10B gene_id:26000|Hs108|chr16 ( 808) 504 123.9 4.5e-28
CCDS8162.1 TBC1D10C gene_id:374403|Hs108|chr11 ( 446) 497 122.1 8.6e-28
CCDS13874.1 TBC1D10A gene_id:83874|Hs108|chr22 ( 508) 494 121.5 1.5e-27
CCDS32301.2 TBC1D2B gene_id:23102|Hs108|chr15 ( 914) 490 120.7 4.6e-27
CCDS45314.1 TBC1D2B gene_id:23102|Hs108|chr15 ( 963) 490 120.8 4.8e-27
CCDS14522.1 TBC1D8B gene_id:54885|Hs108|chrX (1120) 490 120.8 5.4e-27
CCDS56227.1 TBC1D10A gene_id:83874|Hs108|chr22 ( 515) 485 119.4 6.4e-27
CCDS35080.1 TBC1D2 gene_id:55357|Hs108|chr9 ( 917) 485 119.6 1e-26
CCDS14002.1 SGSM3 gene_id:27352|Hs108|chr22 ( 749) 460 113.8 4.6e-25
CCDS33972.1 TBC1D1 gene_id:23216|Hs108|chr4 (1168) 393 98.6 2.6e-20
CCDS30774.1 EVI5 gene_id:7813|Hs108|chr1 ( 810) 391 98.1 2.7e-20
CCDS76179.1 EVI5 gene_id:7813|Hs108|chr1 ( 821) 391 98.1 2.7e-20
CCDS53492.1 USP6NL gene_id:9712|Hs108|chr10 ( 828) 390 97.9 3.2e-20
CCDS44357.1 USP6NL gene_id:9712|Hs108|chr10 ( 845) 390 97.9 3.3e-20
CCDS12188.1 EVI5L gene_id:115704|Hs108|chr19 ( 794) 383 96.2 9.5e-20
CCDS54209.1 EVI5L gene_id:115704|Hs108|chr19 ( 805) 383 96.3 9.6e-20
CCDS1314.1 RABGAP1L gene_id:9910|Hs108|chr1 ( 815) 364 91.9 2e-18
CCDS66563.1 TBC1D4 gene_id:9882|Hs108|chr13 (1235) 357 90.4 8.3e-18
CCDS66564.1 TBC1D4 gene_id:9882|Hs108|chr13 (1290) 357 90.4 8.6e-18
CCDS41901.1 TBC1D4 gene_id:9882|Hs108|chr13 (1298) 357 90.4 8.6e-18
CCDS6848.2 RABGAP1 gene_id:23637|Hs108|chr9 (1069) 328 83.8 7.3e-16
CCDS14523.1 TBC1D8B gene_id:54885|Hs108|chrX ( 632) 320 81.8 1.7e-15
CCDS11069.2 USP6 gene_id:9098|Hs108|chr17 (1406) 305 78.6 3.5e-14
CCDS74045.1 TBC1D3C gene_id:414060|Hs108|chr17 ( 549) 286 74.0 3.3e-13
CCDS45658.1 TBC1D3 gene_id:729873|Hs108|chr17 ( 549) 286 74.0 3.3e-13
CCDS74039.1 TBC1D3I gene_id:102724862|Hs108|chr17 ( 549) 284 73.5 4.5e-13
CCDS74044.1 LOC101060389 gene_id:101060389|Hs108|c ( 549) 284 73.5 4.5e-13
CCDS45653.1 TBC1D3H gene_id:729877|Hs108|chr17 ( 549) 282 73.1 6.2e-13
CCDS77009.1 TBC1D3E gene_id:102723859|Hs108|chr17 ( 549) 282 73.1 6.2e-13
CCDS74040.1 TBC1D3G gene_id:101060321|Hs108|chr17 ( 549) 281 72.8 7.3e-13
CCDS74042.1 TBC1D3K gene_id:101060351|Hs108|chr17 ( 549) 281 72.8 7.3e-13
CCDS42300.1 TBC1D3B gene_id:414059|Hs108|chr17 ( 549) 276 71.7 1.6e-12
CCDS74043.1 TBC1D3L gene_id:101060376|Hs108|chr17 ( 549) 275 71.5 1.9e-12
>>CCDS66591.1 GRTP1 gene_id:79774|Hs108|chr13 (344 aa)
initn: 2373 init1: 2373 opt: 2373 Z-score: 2931.1 bits: 550.8 E(32554): 6.1e-157
Smith-Waterman score: 2373; 100.0% identity (100.0% similar) in 344 aa overlap (1-344:1-344)
10 20 30 40 50 60
pF1KE4 MQPAERSRVPRIDPYGFERPEDFDDAAYEKFFSSYLVTLTRRAIKWSRLLQGGGVPRSRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MQPAERSRVPRIDPYGFERPEDFDDAAYEKFFSSYLVTLTRRAIKWSRLLQGGGVPRSRT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 VKRYVRKGVPLEHRARVWMVLSGAQAQMDQNPGYYHQLLQGERNPRLEDAIRTDLNRTFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 VKRYVRKGVPLEHRARVWMVLSGAQAQMDQNPGYYHQLLQGERNPRLEDAIRTDLNRTFP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DNVKFRKTTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 DNVKFRKTTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 LVGRILPDYYSPAMLGLKTDQEVLGELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 LVGRILPDYYSPAMLGLKTDQEVLGELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ILPVETVLRIWDCLFNEGSKIIFRVALTLIKQHQELILEATSVPDICDKFKQITKGSFVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 ILPVETVLRIWDCLFNEGSKIIFRVALTLIKQHQELILEATSVPDICDKFKQITKGSFVM
250 260 270 280 290 300
310 320 330 340
pF1KE4 ECHTFMQVCGAARGSVPSQGAPPHLQPGGCSDHPEGAQDGHQWA
::::::::::::::::::::::::::::::::::::::::::::
CCDS66 ECHTFMQVCGAARGSVPSQGAPPHLQPGGCSDHPEGAQDGHQWA
310 320 330 340
>>CCDS9534.2 GRTP1 gene_id:79774|Hs108|chr13 (336 aa)
initn: 2107 init1: 2086 opt: 2086 Z-score: 2576.8 bits: 485.2 E(32554): 3.3e-137
Smith-Waterman score: 2086; 97.8% identity (98.4% similar) in 316 aa overlap (1-316:1-316)
10 20 30 40 50 60
pF1KE4 MQPAERSRVPRIDPYGFERPEDFDDAAYEKFFSSYLVTLTRRAIKWSRLLQGGGVPRSRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 MQPAERSRVPRIDPYGFERPEDFDDAAYEKFFSSYLVTLTRRAIKWSRLLQGGGVPRSRT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 VKRYVRKGVPLEHRARVWMVLSGAQAQMDQNPGYYHQLLQGERNPRLEDAIRTDLNRTFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 VKRYVRKGVPLEHRARVWMVLSGAQAQMDQNPGYYHQLLQGERNPRLEDAIRTDLNRTFP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DNVKFRKTTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 DNVKFRKTTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 LVGRILPDYYSPAMLGLKTDQEVLGELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 LVGRILPDYYSPAMLGLKTDQEVLGELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE4 ILPVETVLRIWDCLFNEGSKIIFRVALTLIKQHQELILEATSVPDICDKFKQITKGSFVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 ILPVETVLRIWDCLFNEGSKIIFRVALTLIKQHQELILEATSVPDICDKFKQITKGSFVM
250 260 270 280 290 300
310 320 330 340
pF1KE4 ECHTFMQVCGAARGSVPSQGAPPHLQPGGCSDHPEGAQDGHQWA
::::::: . ::.
CCDS95 ECHTFMQKIFSEPGSLSMATVAKLRESCRARLLAQG
310 320 330
>>CCDS73606.1 GRTP1 gene_id:79774|Hs108|chr13 (236 aa)
initn: 1307 init1: 1286 opt: 1286 Z-score: 1590.9 bits: 302.3 E(32554): 2.7e-82
Smith-Waterman score: 1286; 99.5% identity (100.0% similar) in 188 aa overlap (1-188:1-188)
10 20 30 40 50 60
pF1KE4 MQPAERSRVPRIDPYGFERPEDFDDAAYEKFFSSYLVTLTRRAIKWSRLLQGGGVPRSRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MQPAERSRVPRIDPYGFERPEDFDDAAYEKFFSSYLVTLTRRAIKWSRLLQGGGVPRSRT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 VKRYVRKGVPLEHRARVWMVLSGAQAQMDQNPGYYHQLLQGERNPRLEDAIRTDLNRTFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VKRYVRKGVPLEHRARVWMVLSGAQAQMDQNPGYYHQLLQGERNPRLEDAIRTDLNRTFP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DNVKFRKTTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 DNVKFRKTTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 LVGRILPDYYSPAMLGLKTDQEVLGELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVD
:::::::.
CCDS73 LVGRILPENIFRTWKLIHGHRRQAPRELQGPAAGTGVSVPVPCVARLYTDDAPFQS
190 200 210 220 230
>>CCDS59137.1 TBC1D2 gene_id:55357|Hs108|chr9 (468 aa)
initn: 347 init1: 242 opt: 537 Z-score: 661.6 bits: 131.3 E(32554): 1.6e-30
Smith-Waterman score: 543; 35.2% identity (61.9% similar) in 307 aa overlap (5-295:93-394)
10 20
pF1KE4 MQPAERSRVPRIDPYGFERPEDFD--D----AAY
: : . . : ::: :.. : :
CCDS59 DEASECSELLRQLVQEALQWEAGEASSDSIELSPISKYDEYGFLTVPDYEVEDLKLLAKI
70 80 90 100 110 120
30 40 50 60 70 80
pF1KE4 EKFFSSYLVTLTRRAI------KWSRLLQGGGVPRSRTVKRYVRKGVPLEHRARVWMVLS
. . : : .:. .:. : : :: : .:. .: ::: ::: ::: :
CCDS59 QALESRSHHLLGLEAVDRPLRERWAAL--GDLVP-SAELKQLLRAGVPREHRPRVWRWLV
130 140 150 160 170
90 100 110 120 130
pF1KE4 GAQAQMDQNPGYYHQLL---QGERNPRLEDAIRTDLNRTFPDNVKFRKTTDPCLQRTLYN
..: ..:: :..:: :....: .. :. :::::::.: .: :. . :
CCDS59 HLRVQHLHTPGCYQELLSRGQAREHPAARQ-IELDLNRTFPNNKHFTCPTSS-FPDKLRR
180 190 200 210 220 230
140 150 160 170 180 190
pF1KE4 VLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDALVGRILP-DYYSPAMLGLK
::::.. .: .:::::.: .:. .:. ..:: .:: : :.: :.: ::: .. . .
CCDS59 VLLAFSWQNPTIGYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMPADYYCNTLTASQ
240 250 260 270 280 290
200 210 220 230 240 250
pF1KE4 TDQEVLGELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVDILPVETVLRIWDCLFNEG
.::.:: .:. ::: . : . . : .:.. ::. .:.: : . .::.:: .. ::
CCDS59 VDQRVLQDLLSEKLPRLMAHLGQHHVDLSLVTFNWFLVVFADSLISNILLRVWDAFLYEG
300 310 320 330 340 350
260 270 280 290 300 310
pF1KE4 SKIIFRVALTLIKQHQELILEATSVPDICDKFKQITKGSFVMECHTFMQVCGAARGSVPS
.:..:: ::...: ... ::. . .: . .. .::
CCDS59 TKVVFRYALAIFKYNEKEILRLQNGLEIYQYLRFFTKTISNSRKLMNIAFNDMNPFRMKQ
360 370 380 390 400 410
320 330 340
pF1KE4 QGAPPHLQPGGCSDHPEGAQDGHQWA
CCDS59 LRQLRMVHRERLEAELRELEQLKAEYLERRASRRRAVSEGCASEDEVEGEA
420 430 440 450 460
>>CCDS75865.1 TBC1D2 gene_id:55357|Hs108|chr9 (928 aa)
initn: 347 init1: 242 opt: 537 Z-score: 657.3 bits: 131.5 E(32554): 2.7e-30
Smith-Waterman score: 543; 35.2% identity (61.9% similar) in 307 aa overlap (5-295:553-854)
10 20
pF1KE4 MQPAERSRVPRIDPYGFERPEDFD--D----AAY
: : . . : ::: :.. : :
CCDS75 DEASECSELLRQLVQEALQWEAGEASSDSIELSPISKYDEYGFLTVPDYEVEDLKLLAKI
530 540 550 560 570 580
30 40 50 60 70 80
pF1KE4 EKFFSSYLVTLTRRAI------KWSRLLQGGGVPRSRTVKRYVRKGVPLEHRARVWMVLS
. . : : .:. .:. : : :: : .:. .: ::: ::: ::: :
CCDS75 QALESRSHHLLGLEAVDRPLRERWAAL--GDLVP-SAELKQLLRAGVPREHRPRVWRWLV
590 600 610 620 630
90 100 110 120 130
pF1KE4 GAQAQMDQNPGYYHQLL---QGERNPRLEDAIRTDLNRTFPDNVKFRKTTDPCLQRTLYN
..: ..:: :..:: :....: .. :. :::::::.: .: :. . :
CCDS75 HLRVQHLHTPGCYQELLSRGQAREHPAARQ-IELDLNRTFPNNKHFTCPTSS-FPDKLRR
640 650 660 670 680 690
140 150 160 170 180 190
pF1KE4 VLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDALVGRILP-DYYSPAMLGLK
::::.. .: .:::::.: .:. .:. ..:: .:: : :.: :.: ::: .. . .
CCDS75 VLLAFSWQNPTIGYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMPADYYCNTLTASQ
700 710 720 730 740 750
200 210 220 230 240 250
pF1KE4 TDQEVLGELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVDILPVETVLRIWDCLFNEG
.::.:: .:. ::: . : . . : .:.. ::. .:.: : . .::.:: .. ::
CCDS75 VDQRVLQDLLSEKLPRLMAHLGQHHVDLSLVTFNWFLVVFADSLISNILLRVWDAFLYEG
760 770 780 790 800 810
260 270 280 290 300 310
pF1KE4 SKIIFRVALTLIKQHQELILEATSVPDICDKFKQITKGSFVMECHTFMQVCGAARGSVPS
.:..:: ::...: ... ::. . .: . .. .::
CCDS75 TKVVFRYALAIFKYNEKEILRLQNGLEIYQYLRFFTKTISNSRKLMNIAFNDMNPFRMKQ
820 830 840 850 860 870
320 330 340
pF1KE4 QGAPPHLQPGGCSDHPEGAQDGHQWA
CCDS75 LRQLRMVHRERLEAELRELEQLKAEYLERRASRRRAVSEGCASEDEVEGEA
880 890 900 910 920
>>CCDS47136.1 TBC1D9 gene_id:23158|Hs108|chr4 (1266 aa)
initn: 504 init1: 171 opt: 531 Z-score: 647.9 bits: 130.2 E(32554): 9e-30
Smith-Waterman score: 531; 34.8% identity (66.7% similar) in 267 aa overlap (15-278:467-722)
10 20 30 40
pF1KE4 MQPAERSRVPRIDPYGFERPEDFDDAAYEKFFSSYLVTLTRRAI
: . ::.:. ..:.. :
CCDS47 RSTSSDADGERQFNLNGNSVPTATQTLMTMYRRRSPEEFNPKLAKEFLKEQAWK-----I
440 450 460 470 480 490
50 60 70 80 90 100
pF1KE4 KWSRLLQGGGVPRSRTVKRYVRKGVPLEHRARVWMVLSGAQAQMDQNPGYYHQLLQ---G
.... :: . :.. ... : ::.: :...:..:::: . .::::..:.. :
CCDS47 HFAEYGQGICMYRTEKTRELVLKGIPESMRGELWLLLSGAINEKATHPGYYEDLVEKSMG
500 510 520 530 540 550
110 120 130 140 150 160
pF1KE4 ERNPRLEDAIRTDLNRTFPDNVKFRKTTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFIA
. : :. :. ::.:..:.. :.. .: :: ::. .: ..::::.::...
CCDS47 KYNLATEE-IERDLHRSLPEHPAFQNEMGIA---ALRRVLTAYAFRNPNIGYCQAMNIVT
560 570 580 590 600
170 180 190 200 210 220
pF1KE4 GYLILITNNEEESFWLLDALVGRILPDYYSPAMLGLKTDQEVLGELVRAKLPAVGALMER
. :.: .. :::.:::: :: :.:::::. ..: .:: :. ::.: .: . :.
CCDS47 SVLLLYAK-EEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELARDYVPQLYDCMQD
610 620 630 640 650 660
230 240 250 260 270 280
pF1KE4 LGVLWTLLVSRWFICLFVDILPVETVLRIWDCLFNEGSKIIFRVALTLIKQHQELILEAT
:::. :. .: ::. ::....: :... . ::.: :: :.::..::... . . .:
CCDS47 LGVISTISLS-WFLTLFLSVMPFESAVVVVDCFFYEGIKVIFQLALAVLDANVDKLLNCK
670 680 690 700 710 720
290 300 310 320 330 340
pF1KE4 SVPDICDKFKQITKGSFVMECHTFMQVCGAARGSVPSQGAPPHLQPGGCSDHPEGAQDGH
CCDS47 DDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLSDDVEPYPEVDIFRLIRTSYEKFGTIR
730 740 750 760 770 780
>>CCDS4450.1 TBC1D9B gene_id:23061|Hs108|chr5 (1233 aa)
initn: 495 init1: 172 opt: 521 Z-score: 635.8 bits: 127.9 E(32554): 4.3e-29
Smith-Waterman score: 521; 38.8% identity (69.0% similar) in 232 aa overlap (52-278:490-715)
30 40 50 60 70
pF1KE4 DFDDAAYEKFFSSYLVTLTRRAIKWSRLLQGGGVPRSRTVKRY--VRKGVPLEHRARVWM
: :: ::.: : ::.: :...:.
CCDS44 QKNSPMEDLGAKGAKEKMKEESWHIHFFEYGRGVCMYRTAKTRALVLKGIPESLRGELWL
460 470 480 490 500 510
80 90 100 110 120 130
pF1KE4 VLSGAQAQMDQNPGYYHQLLQ---GERNPRLEDAIRTDLNRTFPDNVKFRKTTDPCLQRT
..::: .: .:::: .:.. :. . :. :. ::.:..:.. :.. .
CCDS44 LFSGAWNEMVTHPGYYAELVEKSTGKYSLATEE-IERDLHRSMPEHPAFQNELGIA---A
520 530 540 550 560 570
140 150 160 170 180 190
pF1KE4 LYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDALVGRILPDYYSPAMLG
: :: ::. .: .::::.::.... :.: ..:::.:::: :: :.:::::. ..:
CCDS44 LRRVLTAYAFRNPTIGYCQAMNIVTSVLLLY-GSEEEAFWLLVALCERMLPDYYNTRVVG
580 590 600 610 620 630
200 210 220 230 240 250
pF1KE4 LKTDQEVLGELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVDILPVETVLRIWDCLFN
.:: .. ::.: :: .. :. :::. .. .: ::. ::....: :... : ::.:
CCDS44 ALVDQGIFEELTRDFLPQLSEKMQDLGVISSISLS-WFLTLFLSVMPFESAVVIVDCFFY
640 650 660 670 680 690
260 270 280 290 300 310
pF1KE4 EGSKIIFRVALTLIKQHQELILEATSVPDICDKFKQITKGSFVMECHTFMQVCGAARGSV
:: :.:..:::... ..: .:
CCDS44 EGIKVILQVALAVLDANMEQLLGCSDEGEAMTMLGRYLDNVVNKQSVSPPIPHLRALLSS
700 710 720 730 740 750
>>CCDS43408.1 TBC1D9B gene_id:23061|Hs108|chr5 (1250 aa)
initn: 495 init1: 172 opt: 521 Z-score: 635.7 bits: 127.9 E(32554): 4.4e-29
Smith-Waterman score: 521; 38.8% identity (69.0% similar) in 232 aa overlap (52-278:490-715)
30 40 50 60 70
pF1KE4 DFDDAAYEKFFSSYLVTLTRRAIKWSRLLQGGGVPRSRTVKRY--VRKGVPLEHRARVWM
: :: ::.: : ::.: :...:.
CCDS43 QKNSPMEDLGAKGAKEKMKEESWHIHFFEYGRGVCMYRTAKTRALVLKGIPESLRGELWL
460 470 480 490 500 510
80 90 100 110 120 130
pF1KE4 VLSGAQAQMDQNPGYYHQLLQ---GERNPRLEDAIRTDLNRTFPDNVKFRKTTDPCLQRT
..::: .: .:::: .:.. :. . :. :. ::.:..:.. :.. .
CCDS43 LFSGAWNEMVTHPGYYAELVEKSTGKYSLATEE-IERDLHRSMPEHPAFQNELGIA---A
520 530 540 550 560 570
140 150 160 170 180 190
pF1KE4 LYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDALVGRILPDYYSPAMLG
: :: ::. .: .::::.::.... :.: ..:::.:::: :: :.:::::. ..:
CCDS43 LRRVLTAYAFRNPTIGYCQAMNIVTSVLLLY-GSEEEAFWLLVALCERMLPDYYNTRVVG
580 590 600 610 620 630
200 210 220 230 240 250
pF1KE4 LKTDQEVLGELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVDILPVETVLRIWDCLFN
.:: .. ::.: :: .. :. :::. .. .: ::. ::....: :... : ::.:
CCDS43 ALVDQGIFEELTRDFLPQLSEKMQDLGVISSISLS-WFLTLFLSVMPFESAVVIVDCFFY
640 650 660 670 680 690
260 270 280 290 300 310
pF1KE4 EGSKIIFRVALTLIKQHQELILEATSVPDICDKFKQITKGSFVMECHTFMQVCGAARGSV
:: :.:..:::... ..: .:
CCDS43 EGIKVILQVALAVLDANMEQLLGCSDEGEAMTMLGRYLDNVVNKQSVSPPIPHLRALLSS
700 710 720 730 740 750
>>CCDS46375.1 TBC1D8 gene_id:11138|Hs108|chr2 (1140 aa)
initn: 421 init1: 166 opt: 509 Z-score: 621.4 bits: 125.1 E(32554): 2.7e-28
Smith-Waterman score: 509; 35.3% identity (72.4% similar) in 221 aa overlap (57-275:494-709)
30 40 50 60 70 80
pF1KE4 AYEKFFSSYLVTLTRRAIKWSRLLQGGGVPRSRTVKRYVRKGVPLEHRARVWMVLSGAQA
:.. ... : :.: :.:.:...: : .
CCDS46 SPDSRMSREQIKISLWNDHFVEYGRTVCMFRTEKIRKLVAMGIPESLRGRLWLLFSDAVT
470 480 490 500 510 520
90 100 110 120 130 140
pF1KE4 QMDQNPGYYHQLLQGE--RNPRLEDAIRTDLNRTFPDNVKFRKTTDPCLQRTLYNVLLAY
.. ..:::: .:.. . . . :. ::.:..:.. :.. : .: :: ::
CCDS46 DLASHPGYYGNLVEESLGKCCLVTEEIERDLHRSLPEHPAFQNETGIA---ALRRVLTAY
530 540 550 560 570 580
150 160 170 180 190 200
pF1KE4 GHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDALVGRILPDYYSPAMLGLKTDQEVL
.:.: .::::.::.... :.: :. :::.:::: :. :.::::.. ..: ..:: :.
CCDS46 AHRNPKIGYCQSMNILTSVLLLYTK-EEEAFWLLVAVCERMLPDYFNHRVIGAQVDQSVF
590 600 610 620 630
210 220 230 240 250 260
pF1KE4 GELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVDILPVETVLRIWDCLFNEGSKIIFR
::....:: .. :. :..: .. .: ::. ::..:.:.:... . ::.: .: : ::.
CCDS46 EELIKGHLPELAEHMNDLSALASVSLS-WFLTLFLSIMPLESAVNVVDCFFYDGIKAIFQ
640 650 660 670 680 690
270 280 290 300 310 320
pF1KE4 VALTLIKQHQELILEATSVPDICDKFKQITKGSFVMECHTFMQVCGAARGSVPSQGAPPH
..:.... . :
CCDS46 LGLAVLEANAEDLCSSKDDGQALMILSRFLDHIKNEDSPGPPVGSHHAFFSDDQEPYPVT
700 710 720 730 740 750
>>CCDS82486.1 TBC1D8 gene_id:11138|Hs108|chr2 (1155 aa)
initn: 421 init1: 166 opt: 509 Z-score: 621.3 bits: 125.1 E(32554): 2.7e-28
Smith-Waterman score: 509; 35.3% identity (72.4% similar) in 221 aa overlap (57-275:509-724)
30 40 50 60 70 80
pF1KE4 AYEKFFSSYLVTLTRRAIKWSRLLQGGGVPRSRTVKRYVRKGVPLEHRARVWMVLSGAQA
:.. ... : :.: :.:.:...: : .
CCDS82 SPDSRMSREQIKISLWNDHFVEYGRTVCMFRTEKIRKLVAMGIPESLRGRLWLLFSDAVT
480 490 500 510 520 530
90 100 110 120 130 140
pF1KE4 QMDQNPGYYHQLLQGE--RNPRLEDAIRTDLNRTFPDNVKFRKTTDPCLQRTLYNVLLAY
.. ..:::: .:.. . . . :. ::.:..:.. :.. : .: :: ::
CCDS82 DLASHPGYYGNLVEESLGKCCLVTEEIERDLHRSLPEHPAFQNETGIA---ALRRVLTAY
540 550 560 570 580 590
150 160 170 180 190 200
pF1KE4 GHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDALVGRILPDYYSPAMLGLKTDQEVL
.:.: .::::.::.... :.: :. :::.:::: :. :.::::.. ..: ..:: :.
CCDS82 AHRNPKIGYCQSMNILTSVLLLYTK-EEEAFWLLVAVCERMLPDYFNHRVIGAQVDQSVF
600 610 620 630 640 650
210 220 230 240 250 260
pF1KE4 GELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVDILPVETVLRIWDCLFNEGSKIIFR
::....:: .. :. :..: .. .: ::. ::..:.:.:... . ::.: .: : ::.
CCDS82 EELIKGHLPELAEHMNDLSALASVSLS-WFLTLFLSIMPLESAVNVVDCFFYDGIKAIFQ
660 670 680 690 700 710
270 280 290 300 310 320
pF1KE4 VALTLIKQHQELILEATSVPDICDKFKQITKGSFVMECHTFMQVCGAARGSVPSQGAPPH
..:.... . :
CCDS82 LGLAVLEANAEDLCSSKDDGQALMILSRFLDHIKNEDSPGPPVGSHHAFFSDDQEPYPVT
720 730 740 750 760 770
344 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 01:44:40 2016 done: Sun Nov 6 01:44:41 2016
Total Scan time: 2.630 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]