Result of FASTA (omim) for
pFN21AE4051
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4051, 294 aa
1>>>pF1KE4051 294 - 294 aa - 294 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6117+/-0.000374; mu= 14.7354+/- 0.023
mean_var=141.3971+/-28.996, 0's: 0 Z-trim(117.8): 642 B-trim: 285 in 1/53
Lambda= 0.107858
statistics sampled from 29356 (30183) to 29356 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.354), width: 16
Scan time: 7.650
The best scores are: opt bits E(85289)
XP_005274503 (OMIM: 300890) PREDICTED: ankyrin rep ( 294) 2031 327.5 1.9e-89
NP_001026909 (OMIM: 300890) ankyrin repeat and SOC ( 294) 2031 327.5 1.9e-89
XP_016884772 (OMIM: 300890) PREDICTED: ankyrin rep ( 377) 1807 292.8 6.8e-79
NP_001162003 (OMIM: 300890) ankyrin repeat and SOC ( 262) 1752 284.0 2.1e-76
NP_076992 (OMIM: 300890) ankyrin repeat and SOCS b ( 262) 1752 284.0 2.1e-76
XP_016884774 (OMIM: 300890) PREDICTED: ankyrin rep ( 345) 1528 249.3 7.6e-66
XP_016884775 (OMIM: 300890) PREDICTED: ankyrin rep ( 345) 1528 249.3 7.6e-66
XP_016884773 (OMIM: 300890) PREDICTED: ankyrin rep ( 348) 1302 214.2 2.9e-55
XP_011543760 (OMIM: 300890) PREDICTED: ankyrin rep ( 265) 1300 213.7 3.1e-55
NP_001162002 (OMIM: 300890) ankyrin repeat and SOC ( 252) 1022 170.4 3.2e-42
XP_011543762 (OMIM: 300890) PREDICTED: ankyrin rep ( 233) 1021 170.2 3.4e-42
NP_001012428 (OMIM: 300626) ankyrin repeat and SOC ( 302) 986 164.9 1.7e-40
NP_543149 (OMIM: 300626) ankyrin repeat and SOCS b ( 323) 978 163.7 4.2e-40
XP_011529919 (OMIM: 615050) PREDICTED: ankyrin rep ( 276) 906 152.4 9.1e-37
XP_011529918 (OMIM: 615050) PREDICTED: ankyrin rep ( 284) 906 152.4 9.2e-37
NP_543150 (OMIM: 615050) ankyrin repeat and SOCS b ( 329) 906 152.5 1e-36
XP_005262816 (OMIM: 615050) PREDICTED: ankyrin rep ( 329) 906 152.5 1e-36
NP_001188512 (OMIM: 300626) ankyrin repeat and SOC ( 306) 828 140.3 4.3e-33
NP_078977 (OMIM: 615055) ankyrin repeat and SOCS b ( 278) 694 119.4 7.8e-27
XP_016871638 (OMIM: 600465,615493) PREDICTED: anky (1720) 351 67.1 2.7e-10
XP_016871637 (OMIM: 600465,615493) PREDICTED: anky (1725) 351 67.1 2.7e-10
XP_016871636 (OMIM: 600465,615493) PREDICTED: anky (1735) 351 67.1 2.7e-10
XP_016871635 (OMIM: 600465,615493) PREDICTED: anky (1737) 351 67.1 2.7e-10
XP_016871634 (OMIM: 600465,615493) PREDICTED: anky (1738) 351 67.1 2.7e-10
XP_016871633 (OMIM: 600465,615493) PREDICTED: anky (1741) 351 67.1 2.7e-10
XP_016871632 (OMIM: 600465,615493) PREDICTED: anky (1742) 351 67.1 2.8e-10
XP_016871631 (OMIM: 600465,615493) PREDICTED: anky (1747) 351 67.1 2.8e-10
XP_016871630 (OMIM: 600465,615493) PREDICTED: anky (1751) 351 67.1 2.8e-10
XP_016871629 (OMIM: 600465,615493) PREDICTED: anky (1763) 351 67.1 2.8e-10
XP_016871628 (OMIM: 600465,615493) PREDICTED: anky (1764) 351 67.1 2.8e-10
XP_016871627 (OMIM: 600465,615493) PREDICTED: anky (1785) 351 67.1 2.8e-10
XP_016871626 (OMIM: 600465,615493) PREDICTED: anky (1786) 351 67.1 2.8e-10
XP_016871625 (OMIM: 600465,615493) PREDICTED: anky (1795) 351 67.1 2.8e-10
XP_016871624 (OMIM: 600465,615493) PREDICTED: anky (1838) 351 67.1 2.8e-10
XP_016871623 (OMIM: 600465,615493) PREDICTED: anky (1845) 351 67.1 2.8e-10
XP_016871622 (OMIM: 600465,615493) PREDICTED: anky (1850) 351 67.1 2.9e-10
XP_016871621 (OMIM: 600465,615493) PREDICTED: anky (1855) 351 67.1 2.9e-10
NP_001191332 (OMIM: 600465,615493) ankyrin-3 isofo (1861) 351 67.1 2.9e-10
XP_016871620 (OMIM: 600465,615493) PREDICTED: anky (1862) 351 67.1 2.9e-10
XP_016871619 (OMIM: 600465,615493) PREDICTED: anky (1866) 351 67.1 2.9e-10
NP_001307803 (OMIM: 600465,615493) ankyrin-3 isofo (1867) 351 67.1 2.9e-10
NP_001191333 (OMIM: 600465,615493) ankyrin-3 isofo (1868) 351 67.1 2.9e-10
XP_005269772 (OMIM: 600465,615493) PREDICTED: anky (1885) 351 67.2 2.9e-10
XP_016871618 (OMIM: 600465,615493) PREDICTED: anky (1888) 351 67.2 2.9e-10
XP_016871617 (OMIM: 600465,615493) PREDICTED: anky (1889) 351 67.2 2.9e-10
XP_006717865 (OMIM: 600465,615493) PREDICTED: anky (1898) 351 67.2 2.9e-10
XP_016863506 (OMIM: 615929) PREDICTED: ankyrin rep (1116) 348 66.4 2.9e-10
XP_016863505 (OMIM: 615929) PREDICTED: ankyrin rep (1229) 348 66.4 3.1e-10
XP_016863504 (OMIM: 615929) PREDICTED: ankyrin rep (1367) 348 66.5 3.3e-10
XP_016863503 (OMIM: 615929) PREDICTED: ankyrin rep (1479) 348 66.5 3.4e-10
>>XP_005274503 (OMIM: 300890) PREDICTED: ankyrin repeat (294 aa)
initn: 2031 init1: 2031 opt: 2031 Z-score: 1726.9 bits: 327.5 E(85289): 1.9e-89
Smith-Waterman score: 2031; 100.0% identity (100.0% similar) in 294 aa overlap (1-294:1-294)
10 20 30 40 50 60
pF1KE4 MDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 LLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 ACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVP
190 200 210 220 230 240
250 260 270 280 290
pF1KE4 PESPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLLHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PESPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLLHL
250 260 270 280 290
>>NP_001026909 (OMIM: 300890) ankyrin repeat and SOCS bo (294 aa)
initn: 2031 init1: 2031 opt: 2031 Z-score: 1726.9 bits: 327.5 E(85289): 1.9e-89
Smith-Waterman score: 2031; 100.0% identity (100.0% similar) in 294 aa overlap (1-294:1-294)
10 20 30 40 50 60
pF1KE4 MDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 LLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 ACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVP
190 200 210 220 230 240
250 260 270 280 290
pF1KE4 PESPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLLHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PESPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLLHL
250 260 270 280 290
>>XP_016884772 (OMIM: 300890) PREDICTED: ankyrin repeat (377 aa)
initn: 1807 init1: 1807 opt: 1807 Z-score: 1537.3 bits: 292.8 E(85289): 6.8e-79
Smith-Waterman score: 1807; 100.0% identity (100.0% similar) in 263 aa overlap (32-294:115-377)
10 20 30 40 50 60
pF1KE4 DGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA
::::::::::::::::::::::::::::::
XP_016 SQFGKGRDISNFADLGLEGSCGLWRASSQLDAVSDWSPMHEAAIHGHQLSLRNLISQGWA
90 100 110 120 130 140
70 80 90 100 110 120
pF1KE4 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLL
150 160 170 180 190 200
130 140 150 160 170 180
pF1KE4 LQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA
210 220 230 240 250 260
190 200 210 220 230 240
pF1KE4 CVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPP
270 280 290 300 310 320
250 260 270 280 290
pF1KE4 ESPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLLHL
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ESPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLLHL
330 340 350 360 370
>>NP_001162003 (OMIM: 300890) ankyrin repeat and SOCS bo (262 aa)
initn: 1752 init1: 1752 opt: 1752 Z-score: 1492.8 bits: 284.0 E(85289): 2.1e-76
Smith-Waterman score: 1752; 100.0% identity (100.0% similar) in 254 aa overlap (1-254:1-254)
10 20 30 40 50 60
pF1KE4 MDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 LLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 ACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVP
190 200 210 220 230 240
250 260 270 280 290
pF1KE4 PESPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLLHL
::::::::::::::
NP_001 PESPLAQLFLEREGASLPKPKP
250 260
>>NP_076992 (OMIM: 300890) ankyrin repeat and SOCS box p (262 aa)
initn: 1752 init1: 1752 opt: 1752 Z-score: 1492.8 bits: 284.0 E(85289): 2.1e-76
Smith-Waterman score: 1752; 100.0% identity (100.0% similar) in 254 aa overlap (1-254:1-254)
10 20 30 40 50 60
pF1KE4 MDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 MDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 LLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 LLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 ACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_076 ACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVP
190 200 210 220 230 240
250 260 270 280 290
pF1KE4 PESPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLLHL
::::::::::::::
NP_076 PESPLAQLFLEREGASLPKPKP
250 260
>>XP_016884774 (OMIM: 300890) PREDICTED: ankyrin repeat (345 aa)
initn: 1528 init1: 1528 opt: 1528 Z-score: 1303.1 bits: 249.3 E(85289): 7.6e-66
Smith-Waterman score: 1528; 100.0% identity (100.0% similar) in 223 aa overlap (32-254:115-337)
10 20 30 40 50 60
pF1KE4 DGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA
::::::::::::::::::::::::::::::
XP_016 SQFGKGRDISNFADLGLEGSCGLWRASSQLDAVSDWSPMHEAAIHGHQLSLRNLISQGWA
90 100 110 120 130 140
70 80 90 100 110 120
pF1KE4 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLL
150 160 170 180 190 200
130 140 150 160 170 180
pF1KE4 LQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA
210 220 230 240 250 260
190 200 210 220 230 240
pF1KE4 CVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPP
270 280 290 300 310 320
250 260 270 280 290
pF1KE4 ESPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLLHL
:::::::::::::
XP_016 ESPLAQLFLEREGASLPKPKP
330 340
>>XP_016884775 (OMIM: 300890) PREDICTED: ankyrin repeat (345 aa)
initn: 1528 init1: 1528 opt: 1528 Z-score: 1303.1 bits: 249.3 E(85289): 7.6e-66
Smith-Waterman score: 1528; 100.0% identity (100.0% similar) in 223 aa overlap (32-254:115-337)
10 20 30 40 50 60
pF1KE4 DGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA
::::::::::::::::::::::::::::::
XP_016 SQFGKGRDISNFADLGLEGSCGLWRASSQLDAVSDWSPMHEAAIHGHQLSLRNLISQGWA
90 100 110 120 130 140
70 80 90 100 110 120
pF1KE4 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLL
150 160 170 180 190 200
130 140 150 160 170 180
pF1KE4 LQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA
210 220 230 240 250 260
190 200 210 220 230 240
pF1KE4 CVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPP
270 280 290 300 310 320
250 260 270 280 290
pF1KE4 ESPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLLHL
:::::::::::::
XP_016 ESPLAQLFLEREGASLPKPKP
330 340
>>XP_016884773 (OMIM: 300890) PREDICTED: ankyrin repeat (348 aa)
initn: 1162 init1: 1162 opt: 1302 Z-score: 1113.0 bits: 214.2 E(85289): 2.9e-55
Smith-Waterman score: 1525; 89.0% identity (89.0% similar) in 263 aa overlap (32-294:115-348)
10 20 30 40 50 60
pF1KE4 DGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA
::::::::::::::::::::::::::::::
XP_016 SQFGKGRDISNFADLGLEGSCGLWRASSQLDAVSDWSPMHEAAIHGHQLSLRNLISQGWA
90 100 110 120 130 140
70 80 90 100 110 120
pF1KE4 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLL
:::::::::::::::::::::::::::::::::
XP_016 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQ---------------------------
150 160 170
130 140 150 160 170 180
pF1KE4 LQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 --HGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA
180 190 200 210 220 230
190 200 210 220 230 240
pF1KE4 CVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPP
240 250 260 270 280 290
250 260 270 280 290
pF1KE4 ESPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLLHL
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ESPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLLHL
300 310 320 330 340
>>XP_011543760 (OMIM: 300890) PREDICTED: ankyrin repeat (265 aa)
initn: 1162 init1: 1162 opt: 1300 Z-score: 1112.6 bits: 213.7 E(85289): 3.1e-55
Smith-Waterman score: 1749; 90.1% identity (90.1% similar) in 294 aa overlap (1-294:1-265)
10 20 30 40 50 60
pF1KE4 MDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNL
::::::::::::::::::::::::::::::::::
XP_011 AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ--------------------------
70 80 90
130 140 150 160 170 180
pF1KE4 LLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ---HGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE4 ACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVP
160 170 180 190 200 210
250 260 270 280 290
pF1KE4 PESPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLLHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PESPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLLHL
220 230 240 250 260
>>NP_001162002 (OMIM: 300890) ankyrin repeat and SOCS bo (252 aa)
initn: 1189 init1: 1017 opt: 1022 Z-score: 879.1 bits: 170.4 E(85289): 3.2e-42
Smith-Waterman score: 1653; 96.1% identity (96.1% similar) in 254 aa overlap (1-254:1-244)
10 20 30 40 50 60
pF1KE4 MDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 LLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR
:::::::::::::::::::::::: ::::::::::::::::::::::::::
NP_001 LLQHGASVQPESDLASPIHEAARR----------AYGGNIDHKISHLGTPLYLACENQQR
130 140 150 160 170
190 200 210 220 230 240
pF1KE4 ACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVP
180 190 200 210 220 230
250 260 270 280 290
pF1KE4 PESPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLLHL
::::::::::::::
NP_001 PESPLAQLFLEREGASLPKPKP
240 250
294 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 04:01:18 2016 done: Sun Nov 6 04:01:19 2016
Total Scan time: 7.650 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]