Result of FASTA (omim) for
pFN21AE4046
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4046, 273 aa
1>>>pF1KE4046 273 - 273 aa - 273 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8695+/-0.000505; mu= 17.4247+/- 0.032
mean_var=95.6256+/-18.748, 0's: 0 Z-trim(111.4): 382 B-trim: 492 in 1/52
Lambda= 0.131156
statistics sampled from 19545 (20041) to 19545 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.235), width: 16
Scan time: 6.330
The best scores are: opt bits E(85289)
NP_057628 (OMIM: 613527) dnaJ homolog subfamily C ( 273) 1825 356.0 4.4e-98
XP_016859758 (OMIM: 613527) PREDICTED: dnaJ homolo ( 202) 1360 267.8 1.1e-71
XP_016859759 (OMIM: 613527) PREDICTED: dnaJ homolo ( 202) 1360 267.8 1.1e-71
XP_011531204 (OMIM: 613527) PREDICTED: dnaJ homolo ( 192) 1195 236.6 2.7e-62
NP_001185488 (OMIM: 613527) dnaJ homolog subfamily ( 177) 1194 236.3 2.9e-62
NP_055814 (OMIM: 612398) ras-related protein Rab-2 ( 225) 374 81.3 1.7e-15
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218) 360 78.6 1.1e-14
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 358 78.3 1.4e-14
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 356 77.9 1.8e-14
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 355 77.7 2.1e-14
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 351 76.9 3.3e-14
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 348 76.3 4.9e-14
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 347 76.2 5.9e-14
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 345 75.8 7.4e-14
NP_004628 (OMIM: 600882,602298) ras-related protei ( 207) 345 75.8 7.4e-14
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206) 342 75.2 1.1e-13
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 340 74.9 1.5e-13
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244) 339 74.7 1.8e-13
NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219) 336 74.1 2.5e-13
XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219) 336 74.1 2.5e-13
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 336 74.1 2.5e-13
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 335 73.9 2.7e-13
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 335 73.9 2.7e-13
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 335 73.9 2.7e-13
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 335 73.9 2.7e-13
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 335 73.9 2.7e-13
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220) 330 73.0 5.5e-13
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220) 330 73.0 5.5e-13
NP_001265595 (OMIM: 201000,606144) ras-related pro ( 237) 330 73.0 5.8e-13
NP_899050 (OMIM: 201000,606144) ras-related protei ( 237) 330 73.0 5.8e-13
NP_001265597 (OMIM: 201000,606144) ras-related pro ( 237) 330 73.0 5.8e-13
NP_001265596 (OMIM: 201000,606144) ras-related pro ( 237) 330 73.0 5.8e-13
NP_057361 (OMIM: 201000,606144) ras-related protei ( 237) 330 73.0 5.8e-13
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225) 326 72.2 9.5e-13
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227) 326 72.2 9.5e-13
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 325 72.0 9.9e-13
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 325 72.0 1.1e-12
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256) 324 71.9 1.3e-12
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 322 71.4 1.5e-12
XP_011519340 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 326 72.6 1.6e-12
XP_011519339 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 326 72.6 1.6e-12
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 321 71.2 1.7e-12
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 320 71.0 2e-12
NP_741995 (OMIM: 300774) ras-related protein Rab-3 ( 213) 320 71.1 2e-12
NP_001138430 (OMIM: 614178) EF-hand calcium-bindin ( 731) 326 72.8 2e-12
XP_011519338 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 326 72.8 2e-12
XP_011519336 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 326 72.8 2e-12
XP_006719084 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 326 72.8 2e-12
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215) 316 70.3 3.4e-12
NP_071894 (OMIM: 602206) ras-related protein Rab-1 ( 212) 315 70.1 3.9e-12
>>NP_057628 (OMIM: 613527) dnaJ homolog subfamily C memb (273 aa)
initn: 1825 init1: 1825 opt: 1825 Z-score: 1881.8 bits: 356.0 E(85289): 4.4e-98
Smith-Waterman score: 1825; 100.0% identity (100.0% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KE4 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 SIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 SIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKL
190 200 210 220 230 240
250 260 270
pF1KE4 AVLLHPDKCVAPGSEDAFKAVVNARTALLKNIK
:::::::::::::::::::::::::::::::::
NP_057 AVLLHPDKCVAPGSEDAFKAVVNARTALLKNIK
250 260 270
>>XP_016859758 (OMIM: 613527) PREDICTED: dnaJ homolog su (202 aa)
initn: 1360 init1: 1360 opt: 1360 Z-score: 1407.8 bits: 267.8 E(85289): 1.1e-71
Smith-Waterman score: 1360; 100.0% identity (100.0% similar) in 202 aa overlap (72-273:1-202)
50 60 70 80 90 100
pF1KE4 VSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQK
::::::::::::::::::::::::::::::
XP_016 MAGHPFFYEVRNEFYKDTQGVILVYDVGQK
10 20 30
110 120 130 140 150 160
pF1KE4 DSFDALDAWLAEMKQELGPHGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSFDALDAWLAEMKQELGPHGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYF
40 50 60 70 80 90
170 180 190 200 210 220
pF1KE4 ETSAQTGEGINEMFQTFYISIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ETSAQTGEGINEMFQTFYISIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDM
100 110 120 130 140 150
230 240 250 260 270
pF1KE4 LGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIK
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIK
160 170 180 190 200
>>XP_016859759 (OMIM: 613527) PREDICTED: dnaJ homolog su (202 aa)
initn: 1360 init1: 1360 opt: 1360 Z-score: 1407.8 bits: 267.8 E(85289): 1.1e-71
Smith-Waterman score: 1360; 100.0% identity (100.0% similar) in 202 aa overlap (72-273:1-202)
50 60 70 80 90 100
pF1KE4 VSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQK
::::::::::::::::::::::::::::::
XP_016 MAGHPFFYEVRNEFYKDTQGVILVYDVGQK
10 20 30
110 120 130 140 150 160
pF1KE4 DSFDALDAWLAEMKQELGPHGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSFDALDAWLAEMKQELGPHGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYF
40 50 60 70 80 90
170 180 190 200 210 220
pF1KE4 ETSAQTGEGINEMFQTFYISIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ETSAQTGEGINEMFQTFYISIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDM
100 110 120 130 140 150
230 240 250 260 270
pF1KE4 LGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIK
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIK
160 170 180 190 200
>>XP_011531204 (OMIM: 613527) PREDICTED: dnaJ homolog su (192 aa)
initn: 1194 init1: 1194 opt: 1195 Z-score: 1239.3 bits: 236.6 E(85289): 2.7e-62
Smith-Waterman score: 1195; 96.2% identity (97.3% similar) in 184 aa overlap (1-184:1-184)
10 20 30 40 50 60
pF1KE4 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::: .
XP_011 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQMSLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 SIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKL
. :
XP_011 LLEDRFLPWLTG
190
>>NP_001185488 (OMIM: 613527) dnaJ homolog subfamily C m (177 aa)
initn: 1194 init1: 1194 opt: 1194 Z-score: 1238.7 bits: 236.3 E(85289): 2.9e-62
Smith-Waterman score: 1194; 100.0% identity (100.0% similar) in 176 aa overlap (1-176:1-176)
10 20 30 40 50 60
pF1KE4 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQG
130 140 150 160 170
190 200 210 220 230 240
pF1KE4 SIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKL
>>NP_055814 (OMIM: 612398) ras-related protein Rab-21 [H (225 aa)
initn: 376 init1: 277 opt: 374 Z-score: 399.0 bits: 81.3 E(85289): 1.7e-15
Smith-Waterman score: 374; 33.5% identity (71.0% similar) in 176 aa overlap (12-187:15-178)
10 20 30 40 50
pF1KE4 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTK
::. .::. .:.. :::. .. ::::..: .:...:. .. . :
NP_055 MAAAGGGGGGAAAAGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE4 VHVRDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQE
... ..... :.: ::. :. . .:.:..:.:::::. ..:::. . :. :...
NP_055 LNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKM
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE4 LGPHGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQT
:: ..: . . .:::: :.: :. .:.. .::: : ...:::. ..::.:.:
NP_055 LG-----NEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELF--
130 140 150 160 170
180 190 200 210 220 230
pF1KE4 FYISIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAY
.:::.
NP_055 -----LDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEPQAQTSGGGCCSSG
180 190 200 210 220
>>NP_004569 (OMIM: 179511) ras-related protein Rab-4A is (218 aa)
initn: 347 init1: 242 opt: 360 Z-score: 384.8 bits: 78.6 E(85289): 1.1e-14
Smith-Waterman score: 360; 30.2% identity (63.8% similar) in 199 aa overlap (18-216:15-206)
10 20 30 40 50 60
pF1KE4 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
: . .::: .::::..... ::.: . :::...: ..:
NP_004 MSQTAMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINV
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
. .:..:.: ::. : : .:. . :..::::. ......:: ::.. .. .
NP_004 GGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLAS-
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
.::....:.:: : : : :. .:. . ....:::: :::...: :
NP_004 ----QNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCAR
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 SIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKL
.:.. :.: : .:. . :.:..:. .
NP_004 KILNKIESGELDPERMGSG--IQYGDAALRQLRSPRRAQAPNAQECGC
180 190 200 210
250 260 270
pF1KE4 AVLLHPDKCVAPGSEDAFKAVVNARTALLKNIK
>>NP_002856 (OMIM: 179509) ras-related protein Rab-2A is (212 aa)
initn: 345 init1: 260 opt: 358 Z-score: 382.9 bits: 78.3 E(85289): 1.4e-14
Smith-Waterman score: 358; 33.5% identity (70.3% similar) in 158 aa overlap (18-175:8-160)
10 20 30 40 50 60
pF1KE4 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
: : .:.. :::::.. .. .::: . :::...:. . .
NP_002 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
..::..:.: ::. : . .:. . :..::::. ..:.:. : .:: . .:
NP_002 DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ----
60 70 80 90 100
130 140 150 160 170 180
pF1KE4 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
:.: :..... .:: : ..: : . ::. .:. .:....::::.:. ...: :
NP_002 HSN-SNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAK
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE4 SIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKL
NP_002 EIYEKIQEGVFDINNEANGIKIGPQHAATNATHAGNQGGQQAGGGCC
170 180 190 200 210
>>NP_057238 (OMIM: 612945) ras-related protein Rab-4B [H (213 aa)
initn: 327 init1: 222 opt: 356 Z-score: 380.8 bits: 77.9 E(85289): 1.8e-14
Smith-Waterman score: 356; 29.7% identity (64.9% similar) in 202 aa overlap (18-218:10-203)
10 20 30 40 50 60
pF1KE4 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
: . .:.: .::::..... :..: . :::...: :.:
NP_057 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNV
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
. .:..:.: ::. : : .:. . :..::::. .......: :::.. . .:
NP_057 GGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASP
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
::. ..:.:: : .: : :. .:. . ....:::: :::...: :
NP_057 -----NIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCAR
120 130 140 150 160
190 200 210 220 230
pF1KE4 SIVDLCENGGKRPTTNSSASFTKEQADA-IRRIRNSKDSWDMLGVKPGASRDEVNKAYRK
.:.. ..: : .:. . .:: .:..:. ...
NP_057 TILNKIDSGELDPERMGSGI---QYGDASLRQLRQPRSAQAVAPQPCGC
170 180 190 200 210
240 250 260 270
pF1KE4 LAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIK
>>NP_057406 (OMIM: 612673) ras-related protein Rab-14 [H (215 aa)
initn: 334 init1: 240 opt: 355 Z-score: 379.8 bits: 77.7 E(85289): 2.1e-14
Smith-Waterman score: 355; 32.3% identity (70.9% similar) in 158 aa overlap (18-175:13-165)
10 20 30 40 50 60
pF1KE4 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
: : .:. :::::..... ::.:.. :::...:. ..:
NP_057 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEV
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
..::..:.: ::. : : .:. . :...:::. ...... :..::.. .. .:
NP_057 SGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNP
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
: .... .:: : .: : :.. .:: .:.:..:.::.:::.... :
NP_057 -----NTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAK
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 SIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKL
NP_057 KIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC
180 190 200 210
273 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 03:39:46 2016 done: Sun Nov 6 03:39:47 2016
Total Scan time: 6.330 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]