Result of FASTA (ccds) for
pFN21AE4046
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4046, 273 aa
1>>>pF1KE4046 273 - 273 aa - 273 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9609+/-0.0012; mu= 16.8124+/- 0.073
mean_var=91.5152+/-18.193, 0's: 0 Z-trim(104.7): 186 B-trim: 265 in 1/48
Lambda= 0.134069
statistics sampled from 7810 (8037) to 7810 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.628), E-opt: 0.2 (0.247), width: 16
Scan time: 2.070
The best scores are: opt bits E(32554)
CCDS1716.1 DNAJC27 gene_id:51277|Hs108|chr2 ( 273) 1825 363.4 9.8e-101
CCDS74493.1 DNAJC27 gene_id:51277|Hs108|chr2 ( 177) 1194 241.1 4e-64
CCDS9003.1 RAB21 gene_id:23011|Hs108|chr12 ( 225) 374 82.6 2.6e-16
CCDS31050.1 RAB4A gene_id:5867|Hs108|chr1 ( 218) 360 79.9 1.7e-15
CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8 ( 212) 358 79.5 2.2e-15
CCDS33030.1 RAB4B gene_id:53916|Hs108|chr19 ( 213) 356 79.1 2.8e-15
CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 ( 215) 355 79.0 3.3e-15
CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 ( 203) 351 78.1 5.4e-15
CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 ( 201) 348 77.6 8e-15
CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14 ( 216) 347 77.4 9.6e-15
CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 ( 205) 345 77.0 1.2e-14
CCDS3052.1 RAB7A gene_id:7879|Hs108|chr3 ( 207) 345 77.0 1.2e-14
CCDS7155.1 RAB18 gene_id:22931|Hs108|chr10 ( 206) 342 76.4 1.8e-14
CCDS12257.1 RAB3D gene_id:9545|Hs108|chr19 ( 219) 340 76.1 2.5e-14
CCDS42410.1 RAB12 gene_id:201475|Hs108|chr18 ( 244) 339 75.9 3e-14
CCDS560.1 RAB3B gene_id:5865|Hs108|chr1 ( 219) 336 75.3 4.2e-14
CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17 ( 223) 336 75.3 4.3e-14
CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2 ( 200) 335 75.0 4.6e-14
CCDS8264.1 RAB30 gene_id:27314|Hs108|chr11 ( 203) 335 75.1 4.6e-14
CCDS12372.1 RAB3A gene_id:5864|Hs108|chr19 ( 220) 330 74.1 9.5e-14
CCDS4962.1 RAB23 gene_id:51715|Hs108|chr6 ( 237) 330 74.2 1e-13
CCDS3976.1 RAB3C gene_id:115827|Hs108|chr5 ( 227) 326 73.4 1.7e-13
CCDS82198.1 RAB37 gene_id:326624|Hs108|chr17 ( 196) 325 73.1 1.7e-13
CCDS54161.1 RAB37 gene_id:326624|Hs108|chr17 ( 228) 325 73.2 1.9e-13
CCDS10460.1 RAB26 gene_id:25837|Hs108|chr16 ( 256) 324 73.0 2.3e-13
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12 ( 201) 322 72.5 2.6e-13
CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19 ( 207) 321 72.4 3e-13
CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15 ( 207) 320 72.2 3.5e-13
CCDS14766.1 RAB39B gene_id:116442|Hs108|chrX ( 213) 320 72.2 3.5e-13
CCDS44803.1 CRACR2A gene_id:84766|Hs108|chr12 ( 731) 326 73.9 3.6e-13
CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3 ( 215) 316 71.4 6.1e-13
CCDS2520.1 RAB17 gene_id:64284|Hs108|chr2 ( 212) 315 71.2 6.9e-13
CCDS76806.1 RAB26 gene_id:25837|Hs108|chr16 ( 190) 314 71.0 7.3e-13
CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14 ( 212) 313 70.8 9e-13
CCDS10212.1 RAB11A gene_id:8766|Hs108|chr15 ( 216) 313 70.8 9.2e-13
CCDS45826.1 RAB31 gene_id:11031|Hs108|chr18 ( 195) 311 70.4 1.1e-12
CCDS10153.1 RAB27A gene_id:5873|Hs108|chr15 ( 221) 309 70.1 1.6e-12
CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17 ( 216) 306 69.5 2.3e-12
CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17 ( 249) 306 69.5 2.6e-12
CCDS12201.1 RAB11B gene_id:9230|Hs108|chr19 ( 218) 302 68.7 4e-12
CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3 ( 208) 300 68.3 5.1e-12
CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 300 68.3 5.1e-12
CCDS33850.1 RAB43 gene_id:339122|Hs108|chr3 ( 212) 300 68.3 5.2e-12
CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17 ( 216) 300 68.3 5.2e-12
CCDS3747.1 RAB33B gene_id:83452|Hs108|chr4 ( 229) 299 68.1 6.2e-12
CCDS8224.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 295 67.3 1e-11
CCDS8900.1 RAB5B gene_id:5869|Hs108|chr12 ( 215) 292 66.8 1.5e-11
CCDS14515.1 RAB9B gene_id:51209|Hs108|chrX ( 201) 291 66.5 1.7e-11
CCDS11958.1 RAB27B gene_id:5874|Hs108|chr18 ( 218) 289 66.2 2.3e-11
CCDS14156.1 RAB9A gene_id:9367|Hs108|chrX ( 201) 286 65.6 3.3e-11
>>CCDS1716.1 DNAJC27 gene_id:51277|Hs108|chr2 (273 aa)
initn: 1825 init1: 1825 opt: 1825 Z-score: 1922.0 bits: 363.4 E(32554): 9.8e-101
Smith-Waterman score: 1825; 100.0% identity (100.0% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KE4 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 SIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 SIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKL
190 200 210 220 230 240
250 260 270
pF1KE4 AVLLHPDKCVAPGSEDAFKAVVNARTALLKNIK
:::::::::::::::::::::::::::::::::
CCDS17 AVLLHPDKCVAPGSEDAFKAVVNARTALLKNIK
250 260 270
>>CCDS74493.1 DNAJC27 gene_id:51277|Hs108|chr2 (177 aa)
initn: 1194 init1: 1194 opt: 1194 Z-score: 1264.6 bits: 241.1 E(32554): 4e-64
Smith-Waterman score: 1194; 100.0% identity (100.0% similar) in 176 aa overlap (1-176:1-176)
10 20 30 40 50 60
pF1KE4 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQG
130 140 150 160 170
190 200 210 220 230 240
pF1KE4 SIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKL
>>CCDS9003.1 RAB21 gene_id:23011|Hs108|chr12 (225 aa)
initn: 376 init1: 277 opt: 374 Z-score: 406.2 bits: 82.6 E(32554): 2.6e-16
Smith-Waterman score: 374; 33.5% identity (71.0% similar) in 176 aa overlap (12-187:15-178)
10 20 30 40 50
pF1KE4 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTK
::. .::. .:.. :::. .. ::::..: .:...:. .. . :
CCDS90 MAAAGGGGGGAAAAGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE4 VHVRDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQE
... ..... :.: ::. :. . .:.:..:.:::::. ..:::. . :. :...
CCDS90 LNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKM
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE4 LGPHGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQT
:: ..: . . .:::: :.: :. .:.. .::: : ...:::. ..::.:.:
CCDS90 LG-----NEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELF--
130 140 150 160 170
180 190 200 210 220 230
pF1KE4 FYISIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAY
.:::.
CCDS90 -----LDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEPQAQTSGGGCCSSG
180 190 200 210 220
>>CCDS31050.1 RAB4A gene_id:5867|Hs108|chr1 (218 aa)
initn: 347 init1: 242 opt: 360 Z-score: 391.7 bits: 79.9 E(32554): 1.7e-15
Smith-Waterman score: 360; 30.2% identity (63.8% similar) in 199 aa overlap (18-216:15-206)
10 20 30 40 50 60
pF1KE4 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
: . .::: .::::..... ::.: . :::...: ..:
CCDS31 MSQTAMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINV
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
. .:..:.: ::. : : .:. . :..::::. ......:: ::.. .. .
CCDS31 GGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLAS-
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
.::....:.:: : : : :. .:. . ....:::: :::...: :
CCDS31 ----QNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCAR
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 SIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKL
.:.. :.: : .:. . :.:..:. .
CCDS31 KILNKIESGELDPERMGSG--IQYGDAALRQLRSPRRAQAPNAQECGC
180 190 200 210
250 260 270
pF1KE4 AVLLHPDKCVAPGSEDAFKAVVNARTALLKNIK
>>CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8 (212 aa)
initn: 345 init1: 260 opt: 358 Z-score: 389.8 bits: 79.5 E(32554): 2.2e-15
Smith-Waterman score: 358; 33.5% identity (70.3% similar) in 158 aa overlap (18-175:8-160)
10 20 30 40 50 60
pF1KE4 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
: : .:.. :::::.. .. .::: . :::...:. . .
CCDS61 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
..::..:.: ::. : . .:. . :..::::. ..:.:. : .:: . .:
CCDS61 DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ----
60 70 80 90 100
130 140 150 160 170 180
pF1KE4 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
:.: :..... .:: : ..: : . ::. .:. .:....::::.:. ...: :
CCDS61 HSN-SNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAK
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE4 SIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKL
CCDS61 EIYEKIQEGVFDINNEANGIKIGPQHAATNATHAGNQGGQQAGGGCC
170 180 190 200 210
>>CCDS33030.1 RAB4B gene_id:53916|Hs108|chr19 (213 aa)
initn: 327 init1: 222 opt: 356 Z-score: 387.7 bits: 79.1 E(32554): 2.8e-15
Smith-Waterman score: 356; 29.7% identity (64.9% similar) in 202 aa overlap (18-218:10-203)
10 20 30 40 50 60
pF1KE4 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
: . .:.: .::::..... :..: . :::...: :.:
CCDS33 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNV
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
. .:..:.: ::. : : .:. . :..::::. .......: :::.. . .:
CCDS33 GGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASP
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
::. ..:.:: : .: : :. .:. . ....:::: :::...: :
CCDS33 -----NIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCAR
120 130 140 150 160
190 200 210 220 230
pF1KE4 SIVDLCENGGKRPTTNSSASFTKEQADA-IRRIRNSKDSWDMLGVKPGASRDEVNKAYRK
.:.. ..: : .:. . .:: .:..:. ...
CCDS33 TILNKIDSGELDPERMGSGI---QYGDASLRQLRQPRSAQAVAPQPCGC
170 180 190 200 210
240 250 260 270
pF1KE4 LAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIK
>>CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 (215 aa)
initn: 334 init1: 240 opt: 355 Z-score: 386.6 bits: 79.0 E(32554): 3.3e-15
Smith-Waterman score: 355; 32.3% identity (70.9% similar) in 158 aa overlap (18-175:13-165)
10 20 30 40 50 60
pF1KE4 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
: : .:. :::::..... ::.:.. :::...:. ..:
CCDS68 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEV
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
..::..:.: ::. : : .:. . :...:::. ...... :..::.. .. .:
CCDS68 SGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNP
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
: .... .:: : .: : :.. .:: .:.:..:.::.:::.... :
CCDS68 -----NTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAK
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE4 SIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKL
CCDS68 KIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC
180 190 200 210
>>CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 (203 aa)
initn: 342 init1: 271 opt: 351 Z-score: 382.7 bits: 78.1 E(32554): 5.4e-15
Smith-Waterman score: 351; 30.9% identity (69.7% similar) in 175 aa overlap (18-192:10-177)
10 20 30 40 50 60
pF1KE4 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
:.. .:.. :::.:.: :. : : . :..:::::. . : .
CCDS10 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDI
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
. ..::....: ::. : . . .:. ..:.:::::. .. ::. .. :. .:..
CCDS10 EGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKEN--A
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE4 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
...: ... .:: : .: :.. .. :. .:. .:::::... ...: :...
CCDS10 SAGVERLLL---GNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLAR
120 130 140 150 160
190 200 210 220 230 240
pF1KE4 SIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKL
.: : ..::.:
CCDS10 DI--LLKSGGRRSGNGNKPPSTDLKTCDKKNTNKCSLG
170 180 190 200
>>CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 (201 aa)
initn: 351 init1: 237 opt: 348 Z-score: 379.6 bits: 77.6 E(32554): 8e-15
Smith-Waterman score: 348; 28.4% identity (67.0% similar) in 197 aa overlap (11-203:3-194)
10 20 30 40 50 60
pF1KE4 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
: . .:.. .:.. :::::.. :. . .. .:..:::.:. . ...
CCDS31 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
. ::..:.: ::. : . . .:. ..:.:.:::: ...:. . :: ::.
CCDS31 DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWL----QEIDR
60 70 80 90 100
130 140 150 160 170 180
pF1KE4 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
... ::. .. .:: : : .. ::.. .. .:.: :. ..::::... .... :.:.
CCDS31 YAS-ENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAA
110 120 130 140 150 160
190 200 210 220 230
pF1KE4 SIVDL----CENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKA
: .::.::. . ... .:
CCDS31 EIKKRMGPGAASGGERPNLKIDSTPVKPAGGGCC
170 180 190 200
>>CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14 (216 aa)
initn: 340 init1: 259 opt: 347 Z-score: 378.2 bits: 77.4 E(32554): 9.6e-15
Smith-Waterman score: 347; 32.9% identity (70.9% similar) in 158 aa overlap (18-175:8-160)
10 20 30 40 50 60
pF1KE4 MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
: : .:.. :::::.. .. .::: . :::...:. :..
CCDS95 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNI
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
..::..:.: ::. : . .:. . :..::::. ....:. : .:: . .:
CCDS95 DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ----
60 70 80 90 100
130 140 150 160 170 180
pF1KE4 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
:.. :..... .:: : ..: : . ::. .:. .:....::::.:. ...: :
CCDS95 HSS-SNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAK
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE4 SIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKL
CCDS95 EIYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC
170 180 190 200 210
273 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 03:39:45 2016 done: Sun Nov 6 03:39:45 2016
Total Scan time: 2.070 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]